RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 TFPTP0C1Z6 253 aa12.87□□□□□ -0.35
CDCA3-212ENST00000604599 ITGB5P18084 799 aa12.87□□□□□ -0.35
CDCA3-212ENST00000604599 IL1R2P27930 398 aa12.87□□□□□ -0.35
CDCA3-212ENST00000604599 ENTPD1P49961 510 aa12.87□□□□□ -0.35
CDCA3-212ENST00000604599 NAA20P61599 178 aa12.87□□□□□ -0.35
CDCA3-212ENST00000604599 SNRPFP62306 86 aaKnown RBP12.87□□□□□ -0.35
CDCA3-212ENST00000604599 YWHAZP63104 245 aaKnown RBP12.87□□□□□ -0.35
CDCA3-212ENST00000604599 SPP2Q13103 211 aa12.87□□□□□ -0.35
CDCA3-212ENST00000604599 CUL2Q13617 745 aa12.87□□□□□ -0.35
CDCA3-212ENST00000604599 TEDDM1Q5T9Z0 273 aa12.87□□□□□ -0.35
CDCA3-212ENST00000604599 RFX6Q8HWS3 928 aa12.87□□□□□ -0.35
CDCA3-212ENST00000604599 GPD1LQ8N335 351 aa12.87□□□□□ -0.35
CDCA3-212ENST00000604599 DDI1Q8WTU0 396 aa12.87□□□□□ -0.35
CDCA3-212ENST00000604599 FAF2Q96CS3 445 aa12.87□□□□□ -0.35
CDCA3-212ENST00000604599 CMTM5Q96DZ9 223 aa12.87□□□□□ -0.35
CDCA3-212ENST00000604599 NRDE2Q9H7Z3 1164 aa12.87□□□□□ -0.35
CDCA3-212ENST00000604599 SLC9A2Q9UBY0 812 aa12.87□□□□□ -0.35
CDCA3-212ENST00000604599 PTPRJQ12913 1337 aa12.86□□□□□ -0.35
CDCA3-212ENST00000604599 E9PBE3 544 aa12.86□□□□□ -0.35
CDCA3-212ENST00000604599 H0YIN7 160 aa12.86□□□□□ -0.35
CDCA3-212ENST00000604599 CSDE1O75534 798 aaKnown RBP12.86□□□□□ -0.35
CDCA3-212ENST00000604599 CD1EP15812 388 aa12.86□□□□□ -0.35
CDCA3-212ENST00000604599 MLH1P40692 756 aa12.86□□□□□ -0.35
CDCA3-212ENST00000604599 SLC1A6P48664 564 aa12.86□□□□□ -0.35
CDCA3-212ENST00000604599 IDH3AP50213 366 aa12.86□□□□□ -0.35
CDCA3-212ENST00000604599 DMP1Q13316 513 aaPredicted RBP12.86□□□□□ -0.35
CDCA3-212ENST00000604599 ZNF394Q53GI3 561 aa12.86□□□□□ -0.35
CDCA3-212ENST00000604599 XKR9Q5GH70 373 aa12.86□□□□□ -0.35
CDCA3-212ENST00000604599 LGSNQ5TDP6 509 aa12.86□□□□□ -0.35
CDCA3-212ENST00000604599 ATG14Q6ZNE5 492 aa12.86□□□□□ -0.35
CDCA3-212ENST00000604599 BBS12Q6ZW61 710 aa12.86□□□□□ -0.35
CDCA3-212ENST00000604599 ADGRF2Q8IZF7 708 aa12.86□□□□□ -0.35
CDCA3-212ENST00000604599 BBS5Q8N3I7 341 aa12.86□□□□□ -0.35
CDCA3-212ENST00000604599 SPATA18Q8TC71 538 aa12.86□□□□□ -0.35
CDCA3-212ENST00000604599 ZNF606Q8WXB4 792 aa12.86□□□□□ -0.35
CDCA3-212ENST00000604599 GMCL1Q96IK5 515 aa12.86□□□□□ -0.35
CDCA3-212ENST00000604599 FBXL18Q96ME1 805 aa12.86□□□□□ -0.35
CDCA3-212ENST00000604599 NLRP4Q96MN2 994 aa12.86□□□□□ -0.35
CDCA3-212ENST00000604599 KMT5AQ9NQR1 393 aa12.86□□□□□ -0.35
CDCA3-212ENST00000604599 THEGQ9P2T0 379 aa12.86□□□□□ -0.35
CDCA3-212ENST00000604599 PCDHAC2Q9Y5I4 1007 aa12.86□□□□□ -0.35
CDCA3-212ENST00000604599 GOLGB1Q14789 3259 aaKnown RBP12.86□□□□□ -0.35
CDCA3-212ENST00000604599 HSPA1LP34931 641 aa12.86□□□□□ -0.35
CDCA3-212ENST00000604599 QARSP47897 775 aaKnown RBP12.86□□□□□ -0.35
CDCA3-212ENST00000604599 PSMD7P51665 324 aa12.86□□□□□ -0.35
CDCA3-212ENST00000604599 ADGRE1Q14246 886 aa12.86□□□□□ -0.35
CDCA3-212ENST00000604599 TRMT10BQ6PF06 316 aaKnown RBP12.86□□□□□ -0.35
CDCA3-212ENST00000604599 NPNTQ6UXI9 565 aa12.86□□□□□ -0.35
CDCA3-212ENST00000604599 LPCAT2Q7L5N7 544 aa12.86□□□□□ -0.35
CDCA3-212ENST00000604599 TRIML2Q8N7C3 387 aa12.86□□□□□ -0.35
CDCA3-212ENST00000604599 BSNDQ8WZ55 320 aa12.86□□□□□ -0.35
CDCA3-212ENST00000604599 SLC35B4Q969S0 331 aa12.86□□□□□ -0.35
CDCA3-212ENST00000604599 ZNF512Q96ME7 567 aaPredicted RBP12.86□□□□□ -0.35
CDCA3-212ENST00000604599 KCNK16Q96T55 309 aa12.86□□□□□ -0.35
CDCA3-212ENST00000604599 CCT7Q99832 543 aa12.86□□□□□ -0.35
CDCA3-212ENST00000604599 MAN1C1Q9NR34 630 aa12.86□□□□□ -0.35
CDCA3-212ENST00000604599 KCNH7Q9NS40 1196 aa12.86□□□□□ -0.35
CDCA3-212ENST00000604599 PCSK1NQ9UHG2 260 aa12.86□□□□□ -0.35
CDCA3-212ENST00000604599 DOLKQ9UPQ8 538 aa12.86□□□□□ -0.35
CDCA3-212ENST00000604599 HMX2A2RU54 273 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 MCF2LO15068 1137 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 KLHL41O60662 606 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 SPAG6O75602 509 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 KRT38O76015 456 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 THRAP10827 490 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 PSMA2P25787 234 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 PIGHQ14442 188 aaPredicted RBP12.85□□□□□ -0.35
CDCA3-212ENST00000604599 BORAQ6PGQ7 559 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 POTEHQ6S545 545 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 C15orf39Q6ZRI6 1047 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 ARCQ7LC44 396 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 LILRA2Q8N149 483 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 RNF148Q8N7C7 305 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 GFM2Q969S9 779 aaKnown RBP12.85□□□□□ -0.35
CDCA3-212ENST00000604599 CALN1Q9BXU9 219 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 RMI1Q9H9A7 625 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 RAB6BQ9NRW1 208 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 ZNF180Q9UJW8 692 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 ARHGAP26Q9UNA1 814 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 AIM2O14862 343 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 BIRC5O15392 142 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 COX4I1P13073 169 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 FLOT2Q14254 428 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 KCNJ11Q14654 390 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 TAF5Q15542 800 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 ZACNQ401N2 412 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 ANKDD1AQ495B1 522 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 KCTD21Q4G0X4 260 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 MBLAC2Q68D91 279 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 SCARA3Q6AZY7 606 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 DARS2Q6PI48 645 aaKnown RBP12.85□□□□□ -0.35
CDCA3-212ENST00000604599 ERI1Q8IV48 349 aaKnown RBP12.85□□□□□ -0.35
CDCA3-212ENST00000604599 ALDH16A1Q8IZ83 802 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 GRIN3AQ8TCU5 1115 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 GIPC3Q8TF64 312 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 RIT2Q99578 217 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 PLAC1Q9HBJ0 212 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 RRN3Q9NYV6 651 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 RIMS3Q9UJD0 308 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 WDR37Q9Y2I8 494 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms