RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 EVLQ9UI08 416 aaPredicted RBP13.87□□□□□ -0.19
RPS28-204ENST00000602140 DNMT3LQ9UJW3 386 aa13.87□□□□□ -0.19
RPS28-204ENST00000602140 STARD13Q9Y3M8 1113 aa13.87□□□□□ -0.19
RPS28-204ENST00000602140 PCDHA5Q9Y5H7 936 aa13.87□□□□□ -0.19
RPS28-204ENST00000602140 ATXN2Q99700 1313 aaKnown RBP13.87□□□□□ -0.19
RPS28-204ENST00000602140 MAP1BP46821 2468 aaKnown RBP13.86□□□□□ -0.19
RPS28-204ENST00000602140 MYH10P35580 1976 aa13.86□□□□□ -0.19
RPS28-204ENST00000602140 FAM237AA0A1B0GTK4 181 aa13.86□□□□□ -0.19
RPS28-204ENST00000602140 RPL13P26373 211 aaKnown RBP13.86□□□□□ -0.19
RPS28-204ENST00000602140 PSMC2P35998 433 aaKnown RBP13.86□□□□□ -0.19
RPS28-204ENST00000602140 PLA2G4AP47712 749 aa13.86□□□□□ -0.19
RPS28-204ENST00000602140 KIF11P52732 1056 aa13.86□□□□□ -0.19
RPS28-204ENST00000602140 DPYDQ12882 1025 aa13.86□□□□□ -0.19
RPS28-204ENST00000602140 LMAN2Q12907 356 aa13.86□□□□□ -0.19
RPS28-204ENST00000602140 ADAM9Q13443 819 aa13.86□□□□□ -0.19
RPS28-204ENST00000602140 UAP1L1Q3KQV9 507 aa13.86□□□□□ -0.19
RPS28-204ENST00000602140 ZNF394Q53GI3 561 aa13.86□□□□□ -0.19
RPS28-204ENST00000602140 SPDYCQ5MJ68 293 aa13.86□□□□□ -0.19
RPS28-204ENST00000602140 C10orf120Q5SQS8 335 aa13.86□□□□□ -0.19
RPS28-204ENST00000602140 PPP1R26Q5T8A7 1209 aaPredicted RBP13.86□□□□□ -0.19
RPS28-204ENST00000602140 LYSMD4Q5XG99 296 aa13.86□□□□□ -0.19
RPS28-204ENST00000602140 KLHDC10Q6PID8 442 aa13.86□□□□□ -0.19
RPS28-204ENST00000602140 TOGARAM2Q6ZUX3 1019 aa13.86□□□□□ -0.19
RPS28-204ENST00000602140 CHPFQ8IZ52 775 aa13.86□□□□□ -0.19
RPS28-204ENST00000602140 GUF1Q8N442 669 aaKnown RBP13.86□□□□□ -0.19
RPS28-204ENST00000602140 DEFB119Q8N690 84 aa13.86□□□□□ -0.19
RPS28-204ENST00000602140 CCDC150Q8NCX0 1101 aa13.86□□□□□ -0.19
RPS28-204ENST00000602140 BHMTQ93088 406 aa13.86□□□□□ -0.19
RPS28-204ENST00000602140 ERLEC1Q96DZ1 483 aa13.86□□□□□ -0.19
RPS28-204ENST00000602140 ACOX2Q99424 681 aa13.86□□□□□ -0.19
RPS28-204ENST00000602140 MARK1Q9P0L2 795 aa13.86□□□□□ -0.19
RPS28-204ENST00000602140 CALCOCO1Q9P1Z2 691 aa13.86□□□□□ -0.19
RPS28-204ENST00000602140 NAGPAQ9UK23 515 aa13.86□□□□□ -0.19
RPS28-204ENST00000602140 ZDHHC9Q9Y397 364 aa13.86□□□□□ -0.19
RPS28-204ENST00000602140 A0A1W2PQF6 199 aa13.85□□□□□ -0.19
RPS28-204ENST00000602140 PRRT4C9JH25 899 aa13.85□□□□□ -0.19
RPS28-204ENST00000602140 ZBTB24O43167 697 aaPredicted RBP13.85□□□□□ -0.19
RPS28-204ENST00000602140 AP5Z1O43299 807 aa13.85□□□□□ -0.19
RPS28-204ENST00000602140 ITPKAP23677 461 aa13.85□□□□□ -0.19
RPS28-204ENST00000602140 MAPK8P45983 427 aa13.85□□□□□ -0.19
RPS28-204ENST00000602140 DGKGP49619 791 aa13.85□□□□□ -0.19
RPS28-204ENST00000602140 RPL6Q02878 288 aaKnown RBP13.85□□□□□ -0.19
RPS28-204ENST00000602140 ENPEPQ07075 957 aa13.85□□□□□ -0.19
RPS28-204ENST00000602140 ZNF252P-AS1Q0IIN9 211 aa13.85□□□□□ -0.19
RPS28-204ENST00000602140 SDE2Q6IQ49 451 aa13.85□□□□□ -0.19
RPS28-204ENST00000602140 KRBA2Q6ZNG9 492 aa13.85□□□□□ -0.19
RPS28-204ENST00000602140 SCD5Q86SK9 330 aa13.85□□□□□ -0.19
RPS28-204ENST00000602140 DUSP16Q9BY84 665 aa13.85□□□□□ -0.19
RPS28-204ENST00000602140 DNAI2Q9GZS0 605 aa13.85□□□□□ -0.19
RPS28-204ENST00000602140 TMEM8AQ9HCN3 771 aa13.85□□□□□ -0.19
RPS28-204ENST00000602140 PLK2Q9NYY3 685 aa13.85□□□□□ -0.19
RPS28-204ENST00000602140 PILRBQ9UKJ0 227 aa13.85□□□□□ -0.19
RPS28-204ENST00000602140 STC2O76061 302 aa13.84□□□□□ -0.19
RPS28-204ENST00000602140 CFIP05156 583 aa13.84□□□□□ -0.19
RPS28-204ENST00000602140 RALAP11233 206 aa13.84□□□□□ -0.19
RPS28-204ENST00000602140 CEACAM1P13688 526 aa13.84□□□□□ -0.19
RPS28-204ENST00000602140 ENGP17813 658 aa13.84□□□□□ -0.19
RPS28-204ENST00000602140 CSRP1P21291 193 aaKnown RBP13.84□□□□□ -0.19
RPS28-204ENST00000602140 DPP6P42658 865 aa13.84□□□□□ -0.19
RPS28-204ENST00000602140 PSEN1P49768 467 aa13.84□□□□□ -0.19
RPS28-204ENST00000602140 ZCWPW2Q504Y3 356 aa13.84□□□□□ -0.19
RPS28-204ENST00000602140 KRT39Q6A163 491 aa13.84□□□□□ -0.19
RPS28-204ENST00000602140 KIAA1211LQ6NV74 962 aa13.84□□□□□ -0.19
RPS28-204ENST00000602140 SLC23A3Q6PIS1 610 aa13.84□□□□□ -0.19
RPS28-204ENST00000602140 SLC36A4Q6YBV0 504 aa13.84□□□□□ -0.19
RPS28-204ENST00000602140 Q6ZNB5 142 aa13.84□□□□□ -0.19
RPS28-204ENST00000602140 CCDC186Q7Z3E2 898 aa13.84□□□□□ -0.19
RPS28-204ENST00000602140 TADA2BQ86TJ2 420 aa13.84□□□□□ -0.19
RPS28-204ENST00000602140 IPO4Q8TEX9 1081 aaKnown RBP13.84□□□□□ -0.19
RPS28-204ENST00000602140 SEMA4DQ92854 862 aa13.84□□□□□ -0.19
RPS28-204ENST00000602140 EEF2KMTQ96G04 330 aa13.84□□□□□ -0.19
RPS28-204ENST00000602140 HEXIM2Q96MH2 286 aaKnown RBP13.84□□□□□ -0.19
RPS28-204ENST00000602140 GOLPH3LQ9H4A5 285 aa13.84□□□□□ -0.19
RPS28-204ENST00000602140 CD248Q9HCU0 757 aa13.84□□□□□ -0.19
RPS28-204ENST00000602140 CACNA2D2Q9NY47 1150 aa13.84□□□□□ -0.19
RPS28-204ENST00000602140 USP3Q9Y6I4 520 aa13.84□□□□□ -0.19
RPS28-204ENST00000602140 USP24Q9UPU5 2620 aa13.84□□□□□ -0.19
RPS28-204ENST00000602140 ZFHX4Q86UP3 3567 aa13.84□□□□□ -0.19
RPS28-204ENST00000602140 FRYQ5TBA9 3013 aa13.84□□□□□ -0.19
RPS28-204ENST00000602140 TNRC6BQ9UPQ9 1833 aaKnown RBP13.83□□□□□ -0.2
RPS28-204ENST00000602140 MYO18AQ92614 2054 aaKnown RBP13.83□□□□□ -0.2
RPS28-204ENST00000602140 IGHV1OR15-9A0A0B4J2B8 117 aa13.83□□□□□ -0.2
RPS28-204ENST00000602140 ZNF202O95125 648 aa13.83□□□□□ -0.2
RPS28-204ENST00000602140 KLKB1P03952 638 aa13.83□□□□□ -0.2
RPS28-204ENST00000602140 CISD3P0C7P0 127 aa13.83□□□□□ -0.2
RPS28-204ENST00000602140 NDUFV2P19404 249 aa13.83□□□□□ -0.2
RPS28-204ENST00000602140 GTF2H1P32780 548 aa13.83□□□□□ -0.2
RPS28-204ENST00000602140 FOXC1Q12948 553 aa13.83□□□□□ -0.2
RPS28-204ENST00000602140 SMYD4Q8IYR2 804 aaPredicted RBP13.83□□□□□ -0.2
RPS28-204ENST00000602140 ZNF276Q8N554 614 aa13.83□□□□□ -0.2
RPS28-204ENST00000602140 DEFB124Q8NES8 71 aa13.83□□□□□ -0.2
RPS28-204ENST00000602140 P2RY11Q96G91 374 aa13.83□□□□□ -0.2
RPS28-204ENST00000602140 CDK5RAP1Q96SZ6 601 aaKnown RBP13.83□□□□□ -0.2
RPS28-204ENST00000602140 GABRG3Q99928 467 aa13.83□□□□□ -0.2
RPS28-204ENST00000602140 SCAND2PQ9GZW5 306 aaPredicted RBP13.83□□□□□ -0.2
RPS28-204ENST00000602140 FSCN3Q9NQT6 498 aa13.83□□□□□ -0.2
RPS28-204ENST00000602140 RAB20Q9NX57 234 aa13.83□□□□□ -0.2
RPS28-204ENST00000602140 CLIC5Q9NZA1 410 aa13.83□□□□□ -0.2
RPS28-204ENST00000602140 RASAL2Q9UJF2 1139 aa13.83□□□□□ -0.2
RPS28-204ENST00000602140 CYP8B1Q9UNU6 501 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms