RNA–Protein interactions for RNA: ENST00000602113.5

DDX49-213, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-213ENST00000602113 CSH1P0DML2 217 aa18.22■□□□□ 0.51
DDX49-213ENST00000602113 CSH2P0DML3 217 aa18.22■□□□□ 0.51
DDX49-213ENST00000602113 RDXP35241 583 aaKnown RBP18.22■□□□□ 0.51
DDX49-213ENST00000602113 EPHB3P54753 998 aa18.22■□□□□ 0.51
DDX49-213ENST00000602113 NME3Q13232 169 aa18.22■□□□□ 0.51
DDX49-213ENST00000602113 PDE12Q6L8Q7 609 aaKnown RBP18.22■□□□□ 0.51
DDX49-213ENST00000602113 ANKS1BQ7Z6G8 1248 aa18.22■□□□□ 0.51
DDX49-213ENST00000602113 EXD1Q8NHP7 514 aa18.22■□□□□ 0.51
DDX49-213ENST00000602113 ACTRT1Q8TDG2 376 aa18.22■□□□□ 0.51
DDX49-213ENST00000602113 RAPGEF5Q92565 580 aa18.22■□□□□ 0.51
DDX49-213ENST00000602113 PGAP3Q96FM1 320 aaPredicted RBP18.22■□□□□ 0.51
DDX49-213ENST00000602113 MYRFLQ96LU7 910 aa18.22■□□□□ 0.51
DDX49-213ENST00000602113 PRO3102Q9H379 93 aa18.22■□□□□ 0.51
DDX49-213ENST00000602113 TLR8Q9NR97 1041 aaKnown RBP18.22■□□□□ 0.51
DDX49-213ENST00000602113 COX16Q9P0S2 106 aa18.22■□□□□ 0.51
DDX49-213ENST00000602113 NUDT5Q9UKK9 219 aa18.22■□□□□ 0.51
DDX49-213ENST00000602113 CLASP2O75122 1294 aaKnown RBP18.21■□□□□ 0.51
DDX49-213ENST00000602113 ZRANB2O95218 330 aaKnown RBP eCLIP18.21■□□□□ 0.51
DDX49-213ENST00000602113 IGLV3-25P01717 112 aa18.21■□□□□ 0.51
DDX49-213ENST00000602113 DEUP1Q05D60 604 aa18.21■□□□□ 0.51
DDX49-213ENST00000602113 VEPH1Q14D04 833 aa18.21■□□□□ 0.51
DDX49-213ENST00000602113 DNAJB7Q7Z6W7 309 aaPredicted RBP18.21■□□□□ 0.51
DDX49-213ENST00000602113 FAM131BQ86XD5 332 aa18.21■□□□□ 0.51
DDX49-213ENST00000602113 CCDC185Q8N715 623 aa18.21■□□□□ 0.51
DDX49-213ENST00000602113 GDPD5Q8WTR4 605 aa18.21■□□□□ 0.51
DDX49-213ENST00000602113 CASP10Q92851 521 aa18.21■□□□□ 0.51
DDX49-213ENST00000602113 RNF25Q96BH1 459 aaPredicted RBP18.21■□□□□ 0.51
DDX49-213ENST00000602113 TRMT2BQ96GJ1 504 aaKnown RBP18.21■□□□□ 0.51
DDX49-213ENST00000602113 SLITRK1Q96PX8 696 aa18.21■□□□□ 0.51
DDX49-213ENST00000602113 FAM204AQ9H8W3 233 aa18.21■□□□□ 0.51
DDX49-213ENST00000602113 WDR6Q9NNW5 1121 aaKnown RBP18.21■□□□□ 0.51
DDX49-213ENST00000602113 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.21■□□□□ 0.51
DDX49-213ENST00000602113 GPATCH2LQ9NWQ4 482 aa18.21■□□□□ 0.51
DDX49-213ENST00000602113 DDIT4Q9NX09 232 aa18.21■□□□□ 0.51
DDX49-213ENST00000602113 DDX56Q9NY93 547 aaKnown RBP18.21■□□□□ 0.51
DDX49-213ENST00000602113 CLIC5Q9NZA1 410 aa18.21■□□□□ 0.51
DDX49-213ENST00000602113 RNF14Q9UBS8 474 aa18.21■□□□□ 0.51
DDX49-213ENST00000602113 TTC7AQ9ULT0 858 aaPredicted RBP18.21■□□□□ 0.51
DDX49-213ENST00000602113 ZNF638Q14966 1978 aaKnown RBP18.2■□□□□ 0.5
DDX49-213ENST00000602113 C3orf70A6NLC5 250 aaPredicted RBP18.2■□□□□ 0.5
DDX49-213ENST00000602113 C8AP07357 584 aa18.2■□□□□ 0.5
DDX49-213ENST00000602113 PLD1Q13393 1074 aa18.2■□□□□ 0.5
DDX49-213ENST00000602113 EIF4EBP2Q13542 120 aaPredicted RBP18.2■□□□□ 0.5
DDX49-213ENST00000602113 LLGL1Q15334 1064 aa18.2■□□□□ 0.5
DDX49-213ENST00000602113 BOLA3Q53S33 107 aa18.2■□□□□ 0.5
DDX49-213ENST00000602113 CCDC181Q5TID7 509 aa18.2■□□□□ 0.5
DDX49-213ENST00000602113 MSANTD2Q6P1R3 559 aa18.2■□□□□ 0.5
DDX49-213ENST00000602113 CCDC149Q6ZUS6 474 aa18.2■□□□□ 0.5
DDX49-213ENST00000602113 ZNF572Q7Z3I7 529 aaPredicted RBP18.2■□□□□ 0.5
DDX49-213ENST00000602113 RCOR2Q8IZ40 523 aa18.2■□□□□ 0.5
DDX49-213ENST00000602113 CMASQ8NFW8 434 aaPredicted RBP18.2■□□□□ 0.5
DDX49-213ENST00000602113 SLC22A17Q8WUG5 538 aa18.2■□□□□ 0.5
DDX49-213ENST00000602113 HSPH1Q92598 858 aa18.2■□□□□ 0.5
DDX49-213ENST00000602113 PSMG2Q969U7 264 aa18.2■□□□□ 0.5
DDX49-213ENST00000602113 HERPUD2Q9BSE4 406 aa18.2■□□□□ 0.5
DDX49-213ENST00000602113 SNRNP25Q9BV90 132 aaKnown RBP18.2■□□□□ 0.5
DDX49-213ENST00000602113 SMOC2Q9H3U7 446 aa18.2■□□□□ 0.5
DDX49-213ENST00000602113 PGRMC1O00264 195 aaKnown RBP18.19■□□□□ 0.5
DDX49-213ENST00000602113 SLU7O95391 586 aaKnown RBP18.19■□□□□ 0.5
DDX49-213ENST00000602113 FGGP02679 453 aa18.19■□□□□ 0.5
DDX49-213ENST00000602113 RARGP13631 454 aa18.19■□□□□ 0.5
DDX49-213ENST00000602113 PAFAH1B1P43034 410 aa18.19■□□□□ 0.5
DDX49-213ENST00000602113 PSEN1P49768 467 aa18.19■□□□□ 0.5
DDX49-213ENST00000602113 CKAP4Q07065 602 aaKnown RBP18.19■□□□□ 0.5
DDX49-213ENST00000602113 CA9Q16790 459 aa18.19■□□□□ 0.5
DDX49-213ENST00000602113 ZC3H12AQ5D1E8 599 aaKnown RBP18.19■□□□□ 0.5
DDX49-213ENST00000602113 ZFYVE27Q5T4F4 411 aa18.19■□□□□ 0.5
DDX49-213ENST00000602113 SEL1L2Q5TEA6 688 aa18.19■□□□□ 0.5
DDX49-213ENST00000602113 MFSD7Q6UXD7 560 aa18.19■□□□□ 0.5
DDX49-213ENST00000602113 CHRDL2Q6WN34 429 aa18.19■□□□□ 0.5
DDX49-213ENST00000602113 ADGRD2Q7Z7M1 963 aa18.19■□□□□ 0.5
DDX49-213ENST00000602113 CEP112Q8N8E3 955 aa18.19■□□□□ 0.5
DDX49-213ENST00000602113 RNF139Q8WU17 664 aa18.19■□□□□ 0.5
DDX49-213ENST00000602113 TEKT4Q8WW24 435 aa18.19■□□□□ 0.5
DDX49-213ENST00000602113 OVCA2Q8WZ82 227 aa18.19■□□□□ 0.5
DDX49-213ENST00000602113 TIFAQ96CG3 184 aa18.19■□□□□ 0.5
DDX49-213ENST00000602113 MAGEB5Q9BZ81 275 aa18.19■□□□□ 0.5
DDX49-213ENST00000602113 ZNF334Q9HCZ1 680 aaPredicted RBP18.19■□□□□ 0.5
DDX49-213ENST00000602113 TMPRSS4Q9NRS4 437 aa18.19■□□□□ 0.5
DDX49-213ENST00000602113 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.19■□□□□ 0.5
DDX49-213ENST00000602113 SFMBT1Q9UHJ3 866 aa18.19■□□□□ 0.5
DDX49-213ENST00000602113 MYO7AQ13402 2215 aa18.19■□□□□ 0.5
DDX49-213ENST00000602113 TCRBV7S2A1N4TA0A589 114 aa18.18■□□□□ 0.5
DDX49-213ENST00000602113 LRRD1A4D1F6 860 aa18.18■□□□□ 0.5
DDX49-213ENST00000602113 PER2O15055 1255 aa18.18■□□□□ 0.5
DDX49-213ENST00000602113 TBX18O95935 607 aa18.18■□□□□ 0.5
DDX49-213ENST00000602113 F9P00740 461 aa18.18■□□□□ 0.5
DDX49-213ENST00000602113 CD48P09326 243 aa18.18■□□□□ 0.5
DDX49-213ENST00000602113 EPCAMP16422 314 aa18.18■□□□□ 0.5
DDX49-213ENST00000602113 CXCR3P49682 368 aa18.18■□□□□ 0.5
DDX49-213ENST00000602113 ARSEP51690 589 aa18.18■□□□□ 0.5
DDX49-213ENST00000602113 TAF12Q16514 161 aa18.18■□□□□ 0.5
DDX49-213ENST00000602113 ERMARDQ5T6L9 678 aa18.18■□□□□ 0.5
DDX49-213ENST00000602113 SNX30Q5VWJ9 437 aa18.18■□□□□ 0.5
DDX49-213ENST00000602113 SPOCD1Q6ZMY3 1216 aa18.18■□□□□ 0.5
DDX49-213ENST00000602113 RSRC2Q7L4I2 434 aaKnown RBP18.18■□□□□ 0.5
DDX49-213ENST00000602113 CCDC50Q8IVM0 306 aa18.18■□□□□ 0.5
DDX49-213ENST00000602113 PDZD8Q8NEN9 1154 aa18.18■□□□□ 0.5
DDX49-213ENST00000602113 RBM41Q96IZ5 413 aaKnown RBP18.18■□□□□ 0.5
DDX49-213ENST00000602113 ZNF512Q96ME7 567 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms