RNA–Protein interactions for RNA: ENST00000601582.1

SYMPK-216, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 544 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-216ENST00000601582 BBS2Q9BXC9 721 aa12.29□□□□□ -0.44
SYMPK-216ENST00000601582 DNAI2Q9GZS0 605 aa12.29□□□□□ -0.44
SYMPK-216ENST00000601582 DNMT3LQ9UJW3 386 aa12.29□□□□□ -0.44
SYMPK-216ENST00000601582 PCDHGA5Q9Y5G8 931 aa12.29□□□□□ -0.44
SYMPK-216ENST00000601582 BCLAF3A2AJT9 711 aaKnown RBP12.28□□□□□ -0.44
SYMPK-216ENST00000601582 PRRT4C9JH25 899 aa12.28□□□□□ -0.44
SYMPK-216ENST00000601582 FOXD2O60548 495 aaPredicted RBP12.28□□□□□ -0.44
SYMPK-216ENST00000601582 STC2O76061 302 aa12.28□□□□□ -0.44
SYMPK-216ENST00000601582 ALDH1A2O94788 518 aa12.28□□□□□ -0.44
SYMPK-216ENST00000601582 WASP42768 502 aa12.28□□□□□ -0.44
SYMPK-216ENST00000601582 PSEN1P49768 467 aa12.28□□□□□ -0.44
SYMPK-216ENST00000601582 LRRC63Q05C16 580 aa12.28□□□□□ -0.44
SYMPK-216ENST00000601582 GOLGA8FQ08AF8 430 aa12.28□□□□□ -0.44
SYMPK-216ENST00000601582 GOLGA8DPQ0D2H9 430 aa12.28□□□□□ -0.44
SYMPK-216ENST00000601582 CUL2Q13617 745 aa12.28□□□□□ -0.44
SYMPK-216ENST00000601582 HSF5Q4G112 596 aaPredicted RBP12.28□□□□□ -0.44
SYMPK-216ENST00000601582 RAB41Q5JT25 222 aa12.28□□□□□ -0.44
SYMPK-216ENST00000601582 EOGTQ5NDL2 527 aa12.28□□□□□ -0.44
SYMPK-216ENST00000601582 PMS2CLQ68D20 193 aa12.28□□□□□ -0.44
SYMPK-216ENST00000601582 GRAMD4Q6IC98 578 aa12.28□□□□□ -0.44
SYMPK-216ENST00000601582 TOGARAM2Q6ZUX3 1019 aa12.28□□□□□ -0.44
SYMPK-216ENST00000601582 ZNF276Q8N554 614 aa12.28□□□□□ -0.44
SYMPK-216ENST00000601582 TTC39CQ8N584 583 aa12.28□□□□□ -0.44
SYMPK-216ENST00000601582 ZNF513Q8N8E2 541 aaPredicted RBP12.28□□□□□ -0.44
SYMPK-216ENST00000601582 TERB1Q8NA31 727 aa12.28□□□□□ -0.44
SYMPK-216ENST00000601582 ANKRD52Q8NB46 1076 aa12.28□□□□□ -0.44
SYMPK-216ENST00000601582 OLIG1Q8TAK6 271 aa12.28□□□□□ -0.44
SYMPK-216ENST00000601582 HMGB4Q8WW32 186 aa12.28□□□□□ -0.44
SYMPK-216ENST00000601582 BHMTQ93088 406 aa12.28□□□□□ -0.44
SYMPK-216ENST00000601582 ERLEC1Q96DZ1 483 aa12.28□□□□□ -0.44
SYMPK-216ENST00000601582 ACOX2Q99424 681 aa12.28□□□□□ -0.44
SYMPK-216ENST00000601582 UBXN6Q9BZV1 441 aa12.28□□□□□ -0.44
SYMPK-216ENST00000601582 POLMQ9NP87 494 aaPredicted RBP12.28□□□□□ -0.44
SYMPK-216ENST00000601582 VPS45Q9NRW7 570 aa12.28□□□□□ -0.44
SYMPK-216ENST00000601582 DNAJC17Q9NVM6 304 aaKnown RBP12.28□□□□□ -0.44
SYMPK-216ENST00000601582 PLK2Q9NYY3 685 aa12.28□□□□□ -0.44
SYMPK-216ENST00000601582 ARMCX3Q9UH62 379 aaPredicted RBP12.28□□□□□ -0.44
SYMPK-216ENST00000601582 RASAL2Q9UJF2 1139 aa12.28□□□□□ -0.44
SYMPK-216ENST00000601582 LSM7Q9UK45 103 aaKnown RBP12.28□□□□□ -0.44
SYMPK-216ENST00000601582 MAN1B1Q9UKM7 699 aa12.28□□□□□ -0.44
SYMPK-216ENST00000601582 TCRBV21S2A2A0A5A6 115 aa12.27□□□□□ -0.45
SYMPK-216ENST00000601582 TM4SF5O14894 197 aa12.27□□□□□ -0.45
SYMPK-216ENST00000601582 CACNG3O60359 315 aa12.27□□□□□ -0.45
SYMPK-216ENST00000601582 GADD45BO75293 160 aaPredicted RBP12.27□□□□□ -0.45
SYMPK-216ENST00000601582 CAVIN2O95810 425 aa12.27□□□□□ -0.45
SYMPK-216ENST00000601582 HMBSP08397 361 aa12.27□□□□□ -0.45
SYMPK-216ENST00000601582 CISD3P0C7P0 127 aa12.27□□□□□ -0.45
SYMPK-216ENST00000601582 RALAP11233 206 aa12.27□□□□□ -0.45
SYMPK-216ENST00000601582 BMP6P22004 513 aa12.27□□□□□ -0.45
SYMPK-216ENST00000601582 P2RY2P41231 377 aa12.27□□□□□ -0.45
SYMPK-216ENST00000601582 PDE4CQ08493 712 aa12.27□□□□□ -0.45
SYMPK-216ENST00000601582 EFEMP1Q12805 493 aa12.27□□□□□ -0.45
SYMPK-216ENST00000601582 GOLGA7BQ2TAP0 167 aa12.27□□□□□ -0.45
SYMPK-216ENST00000601582 PREPLQ4J6C6 727 aaPredicted RBP12.27□□□□□ -0.45
SYMPK-216ENST00000601582 PPM1JQ5JR12 505 aa12.27□□□□□ -0.45
SYMPK-216ENST00000601582 STPG1Q5TH74 334 aa12.27□□□□□ -0.45
SYMPK-216ENST00000601582 PGBD3Q8N328 593 aa12.27□□□□□ -0.45
SYMPK-216ENST00000601582 UBR7Q8N806 425 aa12.27□□□□□ -0.45
SYMPK-216ENST00000601582 DHTKD1Q96HY7 919 aaPredicted RBP12.27□□□□□ -0.45
SYMPK-216ENST00000601582 XPO6Q96QU8 1125 aaKnown RBP12.27□□□□□ -0.45
SYMPK-216ENST00000601582 CLIC5Q9NZA1 410 aa12.27□□□□□ -0.45
SYMPK-216ENST00000601582 MARK1Q9P0L2 795 aa12.27□□□□□ -0.45
SYMPK-216ENST00000601582 BCCIPQ9P287 314 aaKnown RBP eCLIP12.27□□□□□ -0.45
SYMPK-216ENST00000601582 WDR35Q9P2L0 1181 aa12.27□□□□□ -0.45
SYMPK-216ENST00000601582 MBD1Q9UIS9 605 aaPredicted RBP12.27□□□□□ -0.45
SYMPK-216ENST00000601582 TSPAN16Q9UKR8 245 aa12.27□□□□□ -0.45
SYMPK-216ENST00000601582 CIZ1Q9ULV3 898 aaPredicted RBP12.27□□□□□ -0.45
SYMPK-216ENST00000601582 STARD13Q9Y3M8 1113 aa12.27□□□□□ -0.45
SYMPK-216ENST00000601582 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.26□□□□□ -0.45
SYMPK-216ENST00000601582 PATE3B3GLJ2 98 aa12.26□□□□□ -0.45
SYMPK-216ENST00000601582 PPP1R3GB7ZBB8 358 aa12.26□□□□□ -0.45
SYMPK-216ENST00000601582 CD19P15391 556 aa12.26□□□□□ -0.45
SYMPK-216ENST00000601582 NTSR1P30989 418 aa12.26□□□□□ -0.45
SYMPK-216ENST00000601582 FMO5P49326 533 aa12.26□□□□□ -0.45
SYMPK-216ENST00000601582 DHPSP49366 369 aaPredicted RBP12.26□□□□□ -0.45
SYMPK-216ENST00000601582 TKTL1P51854 596 aa12.26□□□□□ -0.45
SYMPK-216ENST00000601582 LIMK1P53667 647 aa12.26□□□□□ -0.45
SYMPK-216ENST00000601582 YWHAGP61981 247 aaKnown RBP eCLIP12.26□□□□□ -0.45
SYMPK-216ENST00000601582 MAP7D1Q3KQU3 841 aa12.26□□□□□ -0.45
SYMPK-216ENST00000601582 SGO2Q562F6 1265 aa12.26□□□□□ -0.45
SYMPK-216ENST00000601582 EGFLAMQ63HQ2 1017 aa12.26□□□□□ -0.45
SYMPK-216ENST00000601582 IL31Q6EBC2 164 aa12.26□□□□□ -0.45
SYMPK-216ENST00000601582 PM20D1Q6GTS8 502 aa12.26□□□□□ -0.45
SYMPK-216ENST00000601582 KLHL10Q6JEL2 608 aa12.26□□□□□ -0.45
SYMPK-216ENST00000601582 NUDT18Q6ZVK8 323 aa12.26□□□□□ -0.45
SYMPK-216ENST00000601582 BHLHA9Q7RTU4 235 aa12.26□□□□□ -0.45
SYMPK-216ENST00000601582 TADA2BQ86TJ2 420 aa12.26□□□□□ -0.45
SYMPK-216ENST00000601582 ELOA2Q8IYF1 753 aaPredicted RBP12.26□□□□□ -0.45
SYMPK-216ENST00000601582 TMEFF1Q8IYR6 380 aa12.26□□□□□ -0.45
SYMPK-216ENST00000601582 UBA3Q8TBC4 463 aa12.26□□□□□ -0.45
SYMPK-216ENST00000601582 KCNV2Q8TDN2 545 aa12.26□□□□□ -0.45
SYMPK-216ENST00000601582 ULBP1Q9BZM6 244 aa12.26□□□□□ -0.45
SYMPK-216ENST00000601582 FAM124BQ9H5Z6 455 aaPredicted RBP12.26□□□□□ -0.45
SYMPK-216ENST00000601582 HOOK1Q9UJC3 728 aaKnown RBP12.26□□□□□ -0.45
SYMPK-216ENST00000601582 CEP192Q8TEP8 1941 aa12.25□□□□□ -0.45
SYMPK-216ENST00000601582 LAMA1P25391 3075 aa12.25□□□□□ -0.45
SYMPK-216ENST00000601582 A0A1W2PQF6 199 aa12.25□□□□□ -0.45
SYMPK-216ENST00000601582 SLC12A8A0AV02 714 aa12.25□□□□□ -0.45
SYMPK-216ENST00000601582 WASH3PC4AMC7 463 aa12.25□□□□□ -0.45
SYMPK-216ENST00000601582 RNF225M0QZC1 329 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms