RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 GOLGA7BQ2TAP0 167 aa12.06□□□□□ -0.48
ZNF548-211ENST00000600927 PABPC1LQ4VXU2 614 aaKnown RBP12.06□□□□□ -0.48
ZNF548-211ENST00000600927 TMEM31Q5JXX7 168 aa12.06□□□□□ -0.48
ZNF548-211ENST00000600927 POTEHQ6S545 545 aa12.06□□□□□ -0.48
ZNF548-211ENST00000600927 GET4Q7L5D6 327 aaPredicted RBP12.06□□□□□ -0.48
ZNF548-211ENST00000600927 MAATS1Q7Z4T9 603 aa12.06□□□□□ -0.48
ZNF548-211ENST00000600927 LRRTM3Q86VH5 581 aa12.06□□□□□ -0.48
ZNF548-211ENST00000600927 TTC30AQ86WT1 665 aa12.06□□□□□ -0.48
ZNF548-211ENST00000600927 KATNAL2Q8IYT4 538 aa12.06□□□□□ -0.48
ZNF548-211ENST00000600927 RCOR2Q8IZ40 523 aa12.06□□□□□ -0.48
ZNF548-211ENST00000600927 THEM5Q8N1Q8 247 aa12.06□□□□□ -0.48
ZNF548-211ENST00000600927 TTC9BQ8N6N2 239 aa12.06□□□□□ -0.48
ZNF548-211ENST00000600927 C12orf29Q8N999 325 aa12.06□□□□□ -0.48
ZNF548-211ENST00000600927 NOA1Q8NC60 698 aaKnown RBP12.06□□□□□ -0.48
ZNF548-211ENST00000600927 CCDC26Q8TAB7 109 aa12.06□□□□□ -0.48
ZNF548-211ENST00000600927 ITFG1Q8TB96 612 aa12.06□□□□□ -0.48
ZNF548-211ENST00000600927 C2orf15Q8WU43 125 aaKnown RBP12.06□□□□□ -0.48
ZNF548-211ENST00000600927 ALG3Q92685 438 aa12.06□□□□□ -0.48
ZNF548-211ENST00000600927 ASIC4Q96FT7 647 aa12.06□□□□□ -0.48
ZNF548-211ENST00000600927 PGLYRP2Q96PD5 576 aa12.06□□□□□ -0.48
ZNF548-211ENST00000600927 PSMB7Q99436 277 aa12.06□□□□□ -0.48
ZNF548-211ENST00000600927 LRRC3Q9BY71 257 aa12.06□□□□□ -0.48
ZNF548-211ENST00000600927 DUSP16Q9BY84 665 aa12.06□□□□□ -0.48
ZNF548-211ENST00000600927 GOLPH3Q9H4A6 298 aa12.06□□□□□ -0.48
ZNF548-211ENST00000600927 ANKZF1Q9H8Y5 726 aa12.06□□□□□ -0.48
ZNF548-211ENST00000600927 ASNSD1Q9NWL6 643 aa12.06□□□□□ -0.48
ZNF548-211ENST00000600927 NME7Q9Y5B8 376 aa12.06□□□□□ -0.48
ZNF548-211ENST00000600927 ZFP37Q9Y6Q3 630 aaPredicted RBP12.06□□□□□ -0.48
ZNF548-211ENST00000600927 KRIT1O00522 736 aa12.05□□□□□ -0.48
ZNF548-211ENST00000600927 DPYSL4O14531 572 aa12.05□□□□□ -0.48
ZNF548-211ENST00000600927 ZRANB2O95218 330 aaKnown RBP eCLIP12.05□□□□□ -0.48
ZNF548-211ENST00000600927 ASGR2P07307 311 aa12.05□□□□□ -0.48
ZNF548-211ENST00000600927 GLI1P08151 1106 aa12.05□□□□□ -0.48
ZNF548-211ENST00000600927 KRT7P08729 469 aa12.05□□□□□ -0.48
ZNF548-211ENST00000600927 PDGFRBP09619 1106 aa12.05□□□□□ -0.48
ZNF548-211ENST00000600927 TNFRSF8P28908 595 aa12.05□□□□□ -0.48
ZNF548-211ENST00000600927 PTPN7P35236 360 aa12.05□□□□□ -0.48
ZNF548-211ENST00000600927 RPL7AP62424 266 aaKnown RBP12.05□□□□□ -0.48
ZNF548-211ENST00000600927 SLC6A3Q01959 620 aa12.05□□□□□ -0.48
ZNF548-211ENST00000600927 PDE4CQ08493 712 aa12.05□□□□□ -0.48
ZNF548-211ENST00000600927 SIGLEC14Q08ET2 396 aa12.05□□□□□ -0.48
ZNF548-211ENST00000600927 TWF1Q12792 350 aa12.05□□□□□ -0.48
ZNF548-211ENST00000600927 DUSP4Q13115 394 aa12.05□□□□□ -0.48
ZNF548-211ENST00000600927 MTMR3Q13615 1198 aa12.05□□□□□ -0.48
ZNF548-211ENST00000600927 HTR4Q13639 388 aa12.05□□□□□ -0.48
ZNF548-211ENST00000600927 NAA30Q147X3 362 aaPredicted RBP12.05□□□□□ -0.48
ZNF548-211ENST00000600927 CYP1B1Q16678 543 aa12.05□□□□□ -0.48
ZNF548-211ENST00000600927 MAP9Q49MG5 647 aa12.05□□□□□ -0.48
ZNF548-211ENST00000600927 SLC39A12Q504Y0 691 aa12.05□□□□□ -0.48
ZNF548-211ENST00000600927 INTS6LQ5JSJ4 861 aaKnown RBP12.05□□□□□ -0.48
ZNF548-211ENST00000600927 EFHC1Q5JVL4 640 aa12.05□□□□□ -0.48
ZNF548-211ENST00000600927 DCAF12L1Q5VU92 463 aa12.05□□□□□ -0.48
ZNF548-211ENST00000600927 PMF1Q6P1K2 205 aa12.05□□□□□ -0.48
ZNF548-211ENST00000600927 CC2D1AQ6P1N0 951 aaPredicted RBP12.05□□□□□ -0.48
ZNF548-211ENST00000600927 FAM171BQ6P995 826 aa12.05□□□□□ -0.48
ZNF548-211ENST00000600927 TRIM67Q6ZTA4 783 aa12.05□□□□□ -0.48
ZNF548-211ENST00000600927 VSIG1Q86XK7 387 aa12.05□□□□□ -0.48
ZNF548-211ENST00000600927 TMC8Q8IU68 726 aa12.05□□□□□ -0.48
ZNF548-211ENST00000600927 NPAS3Q8IXF0 933 aa12.05□□□□□ -0.48
ZNF548-211ENST00000600927 UBALD2Q8IYN6 164 aa12.05□□□□□ -0.48
ZNF548-211ENST00000600927 SCML4Q8N228 414 aa12.05□□□□□ -0.48
ZNF548-211ENST00000600927 ATAD1Q8NBU5 361 aa12.05□□□□□ -0.48
ZNF548-211ENST00000600927 MYCBPAPQ8TBZ2 947 aa12.05□□□□□ -0.48
ZNF548-211ENST00000600927 FGF13Q92913 245 aa12.05□□□□□ -0.48
ZNF548-211ENST00000600927 NXPE3Q969Y0 559 aa12.05□□□□□ -0.48
ZNF548-211ENST00000600927 RBM41Q96IZ5 413 aaKnown RBP12.05□□□□□ -0.48
ZNF548-211ENST00000600927 MS4A14Q96JA4 679 aa12.05□□□□□ -0.48
ZNF548-211ENST00000600927 CNPY3Q9BT09 278 aa12.05□□□□□ -0.48
ZNF548-211ENST00000600927 LRFN3Q9BTN0 628 aa12.05□□□□□ -0.48
ZNF548-211ENST00000600927 KCNK12Q9HB15 430 aa12.05□□□□□ -0.48
ZNF548-211ENST00000600927 PNPLA8Q9NP80 782 aa12.05□□□□□ -0.48
ZNF548-211ENST00000600927 TMLHEQ9NVH6 421 aa12.05□□□□□ -0.48
ZNF548-211ENST00000600927 DDX43Q9NXZ2 648 aaKnown RBP12.05□□□□□ -0.48
ZNF548-211ENST00000600927 IGSF9Q9P2J2 1179 aa12.05□□□□□ -0.48
ZNF548-211ENST00000600927 LIMD1Q9UGP4 676 aa12.05□□□□□ -0.48
ZNF548-211ENST00000600927 FEZ2Q9UHY8 353 aaPredicted RBP12.05□□□□□ -0.48
ZNF548-211ENST00000600927 CDH7Q9ULB5 785 aa12.05□□□□□ -0.48
ZNF548-211ENST00000600927 FAM86C2PA6NEL3 165 aa12.04□□□□□ -0.48
ZNF548-211ENST00000600927 TMEM110-MUSTN1A8MSY1 372 aa12.04□□□□□ -0.48
ZNF548-211ENST00000600927 SART1O43290 800 aaKnown RBP12.04□□□□□ -0.48
ZNF548-211ENST00000600927 MOSPD3O75425 235 aa12.04□□□□□ -0.48
ZNF548-211ENST00000600927 RNF8O76064 485 aa12.04□□□□□ -0.48
ZNF548-211ENST00000600927 FBXO21O94952 628 aa12.04□□□□□ -0.48
ZNF548-211ENST00000600927 FGGP02679 453 aa12.04□□□□□ -0.48
ZNF548-211ENST00000600927 PYGMP11217 842 aa12.04□□□□□ -0.48
ZNF548-211ENST00000600927 PTPN2P17706 415 aa12.04□□□□□ -0.48
ZNF548-211ENST00000600927 ATF6P18850 670 aa12.04□□□□□ -0.48
ZNF548-211ENST00000600927 CHRNA3P32297 505 aa12.04□□□□□ -0.48
ZNF548-211ENST00000600927 GBP2P32456 591 aaPredicted RBP12.04□□□□□ -0.48
ZNF548-211ENST00000600927 RFC1P35251 1148 aaPredicted RBP12.04□□□□□ -0.48
ZNF548-211ENST00000600927 CCR2P41597 374 aa12.04□□□□□ -0.48
ZNF548-211ENST00000600927 ZNF143P52747 638 aaPredicted RBP12.04□□□□□ -0.48
ZNF548-211ENST00000600927 PLD1Q13393 1074 aa12.04□□□□□ -0.48
ZNF548-211ENST00000600927 LONRF2Q1L5Z9 754 aa12.04□□□□□ -0.48
ZNF548-211ENST00000600927 SLC26A9Q7LBE3 791 aa12.04□□□□□ -0.48
ZNF548-211ENST00000600927 BMP8AQ7Z5Y6 402 aa12.04□□□□□ -0.48
ZNF548-211ENST00000600927 SLC13A5Q86YT5 568 aaPredicted RBP12.04□□□□□ -0.48
ZNF548-211ENST00000600927 LEMD2Q8NC56 503 aa12.04□□□□□ -0.48
ZNF548-211ENST00000600927 UBA3Q8TBC4 463 aa12.04□□□□□ -0.48
ZNF548-211ENST00000600927 SPPL2BQ8TCT7 592 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms