RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 GRASPQ7Z6J2 395 aaPredicted RBP23.96■■□□□ 1.43
IRF3-227ENST00000600911 DAAM2Q86T65 1068 aa23.96■■□□□ 1.43
IRF3-227ENST00000600911 FNIP1Q8TF40 1166 aa23.96■■□□□ 1.43
IRF3-227ENST00000600911 MYLIPQ8WY64 445 aa23.96■■□□□ 1.43
IRF3-227ENST00000600911 SLC22A12Q96S37 553 aa23.96■■□□□ 1.43
IRF3-227ENST00000600911 TLR8Q9NR97 1041 aaKnown RBP23.96■■□□□ 1.43
IRF3-227ENST00000600911 BRWD1Q9NSI6 2320 aa23.96■■□□□ 1.43
IRF3-227ENST00000600911 A0A1W2PRU2 124 aa23.95■■□□□ 1.43
IRF3-227ENST00000600911 RHOP08100 348 aa23.95■■□□□ 1.43
IRF3-227ENST00000600911 HNRNPA1P09651 372 aaKnown RBP eCLIP23.95■■□□□ 1.43
IRF3-227ENST00000600911 SULT1E1P49888 294 aa23.95■■□□□ 1.43
IRF3-227ENST00000600911 HDAC4P56524 1084 aa23.95■■□□□ 1.43
IRF3-227ENST00000600911 SNX30Q5VWJ9 437 aa23.95■■□□□ 1.43
IRF3-227ENST00000600911 C11orf63Q6NUN7 778 aa23.95■■□□□ 1.43
IRF3-227ENST00000600911 PEBP4Q96S96 227 aa23.95■■□□□ 1.43
IRF3-227ENST00000600911 ABCC13Q9NSE7 274 aa23.95■■□□□ 1.43
IRF3-227ENST00000600911 IP6K2Q9UHH9 426 aa23.95■■□□□ 1.43
IRF3-227ENST00000600911 SYNJ2BP-COX16A0A087WUM0 186 aa23.95■■□□□ 1.42
IRF3-227ENST00000600911 MSI1O43347 362 aaKnown RBP23.95■■□□□ 1.42
IRF3-227ENST00000600911 LRCH4O75427 683 aa23.95■■□□□ 1.42
IRF3-227ENST00000600911 SDC4P31431 198 aa23.95■■□□□ 1.42
IRF3-227ENST00000600911 LTBRP36941 435 aa23.95■■□□□ 1.42
IRF3-227ENST00000600911 PTPN9P43378 593 aa23.95■■□□□ 1.42
IRF3-227ENST00000600911 MARCKSL1P49006 195 aa23.95■■□□□ 1.42
IRF3-227ENST00000600911 EPHA5P54756 1037 aa23.95■■□□□ 1.42
IRF3-227ENST00000600911 CTC1Q2NKJ3 1217 aa23.95■■□□□ 1.42
IRF3-227ENST00000600911 ANKRD54Q6NXT1 300 aa23.95■■□□□ 1.42
IRF3-227ENST00000600911 CYP4V2Q6ZWL3 525 aaPredicted RBP23.95■■□□□ 1.42
IRF3-227ENST00000600911 RTL10Q7L3V2 364 aa23.95■■□□□ 1.42
IRF3-227ENST00000600911 NT5DC3Q86UY8 548 aa23.95■■□□□ 1.42
IRF3-227ENST00000600911 NIPA2Q8N8Q9 360 aa23.95■■□□□ 1.42
IRF3-227ENST00000600911 SHKBP1Q8TBC3 707 aa23.95■■□□□ 1.42
IRF3-227ENST00000600911 FAM172AQ8WUF8 416 aa23.95■■□□□ 1.42
IRF3-227ENST00000600911 CENPIQ92674 756 aaPredicted RBP23.95■■□□□ 1.42
IRF3-227ENST00000600911 GUCD1Q96NT3 240 aa23.95■■□□□ 1.42
IRF3-227ENST00000600911 CNPY3Q9BT09 278 aa23.95■■□□□ 1.42
IRF3-227ENST00000600911 RNF38Q9H0F5 515 aa23.95■■□□□ 1.42
IRF3-227ENST00000600911 SFXN1Q9H9B4 322 aa23.95■■□□□ 1.42
IRF3-227ENST00000600911 ANLNQ9NQW6 1124 aa23.95■■□□□ 1.42
IRF3-227ENST00000600911 TMPRSS4Q9NRS4 437 aa23.95■■□□□ 1.42
IRF3-227ENST00000600911 COX16Q9P0S2 106 aa23.95■■□□□ 1.42
IRF3-227ENST00000600911 SPDYE4A6NLX3 237 aa23.94■■□□□ 1.42
IRF3-227ENST00000600911 CAPN9O14815 690 aa23.94■■□□□ 1.42
IRF3-227ENST00000600911 IGLV3-25P01717 112 aa23.94■■□□□ 1.42
IRF3-227ENST00000600911 IL1R2P27930 398 aa23.94■■□□□ 1.42
IRF3-227ENST00000600911 GNG11P61952 73 aa23.94■■□□□ 1.42
IRF3-227ENST00000600911 EIF4EBP2Q13542 120 aaPredicted RBP23.94■■□□□ 1.42
IRF3-227ENST00000600911 SLC25A52Q3SY17 297 aa23.94■■□□□ 1.42
IRF3-227ENST00000600911 PRSS36Q5K4E3 855 aa23.94■■□□□ 1.42
IRF3-227ENST00000600911 TXNDC8Q6A555 127 aa23.94■■□□□ 1.42
IRF3-227ENST00000600911 OVCA2Q8WZ82 227 aa23.94■■□□□ 1.42
IRF3-227ENST00000600911 PPP2R3CQ969Q6 453 aa23.94■■□□□ 1.42
IRF3-227ENST00000600911 MAGEB5Q9BZ81 275 aa23.94■■□□□ 1.42
IRF3-227ENST00000600911 ASAH2Q9NR71 780 aa23.94■■□□□ 1.42
IRF3-227ENST00000600911 PIGVQ9NUD9 493 aa23.94■■□□□ 1.42
IRF3-227ENST00000600911 CLIC5Q9NZA1 410 aa23.94■■□□□ 1.42
IRF3-227ENST00000600911 TRPM5Q9NZQ8 1165 aa23.94■■□□□ 1.42
IRF3-227ENST00000600911 PRUNE2Q8WUY3 3088 aa23.94■■□□□ 1.42
IRF3-227ENST00000600911 HELZP42694 1942 aaKnown RBP23.93■■□□□ 1.42
IRF3-227ENST00000600911 I6L893 689 aaPredicted RBP23.93■■□□□ 1.42
IRF3-227ENST00000600911 M0QYT0 321 aa23.93■■□□□ 1.42
IRF3-227ENST00000600911 ENC1O14682 589 aa23.93■■□□□ 1.42
IRF3-227ENST00000600911 TLR5O60602 858 aa23.93■■□□□ 1.42
IRF3-227ENST00000600911 PTPN2P17706 415 aa23.93■■□□□ 1.42
IRF3-227ENST00000600911 CC2D1AQ6P1N0 951 aaPredicted RBP23.93■■□□□ 1.42
IRF3-227ENST00000600911 BEND5Q7L4P6 421 aa23.93■■□□□ 1.42
IRF3-227ENST00000600911 ELMOD1Q8N336 334 aa23.93■■□□□ 1.42
IRF3-227ENST00000600911 SMG7Q92540 1137 aaKnown RBP23.93■■□□□ 1.42
IRF3-227ENST00000600911 KRT35Q92764 455 aa23.93■■□□□ 1.42
IRF3-227ENST00000600911 CD101Q93033 1021 aa23.93■■□□□ 1.42
IRF3-227ENST00000600911 CYP2S1Q96SQ9 504 aa23.93■■□□□ 1.42
IRF3-227ENST00000600911 CDX2Q99626 313 aaPredicted RBP23.93■■□□□ 1.42
IRF3-227ENST00000600911 COCHO43405 550 aa23.92■■□□□ 1.42
IRF3-227ENST00000600911 KIF5CO60282 957 aa23.92■■□□□ 1.42
IRF3-227ENST00000600911 TRUB2O95900 331 aaKnown RBP23.92■■□□□ 1.42
IRF3-227ENST00000600911 OAS1P00973 400 aaKnown RBP23.92■■□□□ 1.42
IRF3-227ENST00000600911 EFEMP1Q12805 493 aa23.92■■□□□ 1.42
IRF3-227ENST00000600911 ATP13A4Q4VNC1 1196 aa23.92■■□□□ 1.42
IRF3-227ENST00000600911 MSANTD2Q6P1R3 559 aa23.92■■□□□ 1.42
IRF3-227ENST00000600911 PDZD8Q8NEN9 1154 aa23.92■■□□□ 1.42
IRF3-227ENST00000600911 GOLGA1Q92805 767 aa23.92■■□□□ 1.42
IRF3-227ENST00000600911 WDR6Q9NNW5 1121 aaKnown RBP23.92■■□□□ 1.42
IRF3-227ENST00000600911 CLDND1Q9NY35 253 aa23.92■■□□□ 1.42
IRF3-227ENST00000600911 UXTQ9UBK9 157 aaPredicted RBP23.92■■□□□ 1.42
IRF3-227ENST00000600911 ZNF500O60304 480 aaPredicted RBP23.92■■□□□ 1.42
IRF3-227ENST00000600911 ENDOD1O94919 500 aa23.92■■□□□ 1.42
IRF3-227ENST00000600911 ATP1A1P05023 1023 aaKnown RBP23.92■■□□□ 1.42
IRF3-227ENST00000600911 POU2F2P09086 479 aa23.92■■□□□ 1.42
IRF3-227ENST00000600911 TNNT1P13805 278 aa23.92■■□□□ 1.42
IRF3-227ENST00000600911 MIPP30301 263 aa23.92■■□□□ 1.42
IRF3-227ENST00000600911 ZXDBP98169 803 aa23.92■■□□□ 1.42
IRF3-227ENST00000600911 SLC25A11Q02978 314 aaKnown RBP23.92■■□□□ 1.42
IRF3-227ENST00000600911 NME3Q13232 169 aa23.92■■□□□ 1.42
IRF3-227ENST00000600911 PIGHQ14442 188 aaPredicted RBP23.92■■□□□ 1.42
IRF3-227ENST00000600911 COL19A1Q14993 1142 aa23.92■■□□□ 1.42
IRF3-227ENST00000600911 SYT10Q6XYQ8 523 aa23.92■■□□□ 1.42
IRF3-227ENST00000600911 ARHGAP18Q8N392 663 aa23.92■■□□□ 1.42
IRF3-227ENST00000600911 CMASQ8NFW8 434 aaPredicted RBP23.92■■□□□ 1.42
IRF3-227ENST00000600911 ITFG1Q8TB96 612 aa23.92■■□□□ 1.42
IRF3-227ENST00000600911 WBP2Q969T9 261 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms