RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 Q6ZNB5 142 aa16.61■□□□□ 0.25
VRK3-221ENST00000600284 PIGZQ86VD9 579 aa16.61■□□□□ 0.25
VRK3-221ENST00000600284 TERB1Q8NA31 727 aa16.61■□□□□ 0.25
VRK3-221ENST00000600284 DCLK3Q9C098 648 aa16.61■□□□□ 0.25
VRK3-221ENST00000600284 ANTXRLA6NF34 631 aa16.6■□□□□ 0.25
VRK3-221ENST00000600284 SGK1O00141 431 aa16.6■□□□□ 0.25
VRK3-221ENST00000600284 XPO1O14980 1071 aaKnown RBP16.6■□□□□ 0.25
VRK3-221ENST00000600284 STC2O76061 302 aa16.6■□□□□ 0.25
VRK3-221ENST00000600284 VDRP11473 427 aa16.6■□□□□ 0.25
VRK3-221ENST00000600284 TYRP14679 529 aa16.6■□□□□ 0.25
VRK3-221ENST00000600284 CD44P16070 742 aaKnown RBP16.6■□□□□ 0.25
VRK3-221ENST00000600284 LIMK1P53667 647 aa16.6■□□□□ 0.25
VRK3-221ENST00000600284 BCAT1P54687 386 aa16.6■□□□□ 0.25
VRK3-221ENST00000600284 CETN1Q12798 172 aa16.6■□□□□ 0.25
VRK3-221ENST00000600284 MORC3Q14149 939 aa16.6■□□□□ 0.25
VRK3-221ENST00000600284 EMC10Q5UCC4 262 aa16.6■□□□□ 0.25
VRK3-221ENST00000600284 ISM2Q6H9L7 571 aa16.6■□□□□ 0.25
VRK3-221ENST00000600284 GRAMD4Q6IC98 578 aa16.6■□□□□ 0.25
VRK3-221ENST00000600284 ANO7Q6IWH7 933 aa16.6■□□□□ 0.25
VRK3-221ENST00000600284 TTI2Q6NXR4 508 aa16.6■□□□□ 0.25
VRK3-221ENST00000600284 TTC30AQ86WT1 665 aa16.6■□□□□ 0.25
VRK3-221ENST00000600284 SFTPA1Q8IWL2 248 aa16.6■□□□□ 0.25
VRK3-221ENST00000600284 UBR7Q8N806 425 aa16.6■□□□□ 0.25
VRK3-221ENST00000600284 C12orf50Q8NA57 414 aaPredicted RBP16.6■□□□□ 0.25
VRK3-221ENST00000600284 MDGA1Q8NFP4 955 aa16.6■□□□□ 0.25
VRK3-221ENST00000600284 OLIG1Q8TAK6 271 aa16.6■□□□□ 0.25
VRK3-221ENST00000600284 BBS2Q9BXC9 721 aa16.6■□□□□ 0.25
VRK3-221ENST00000600284 VPS45Q9NRW7 570 aa16.6■□□□□ 0.25
VRK3-221ENST00000600284 HESX1Q9UBX0 185 aa16.6■□□□□ 0.25
VRK3-221ENST00000600284 NUDT5Q9UKK9 219 aa16.6■□□□□ 0.25
VRK3-221ENST00000600284 TSPAN16Q9UKR8 245 aa16.6■□□□□ 0.25
VRK3-221ENST00000600284 CIZ1Q9ULV3 898 aaPredicted RBP16.6■□□□□ 0.25
VRK3-221ENST00000600284 MYOFQ9NZM1 2061 aa16.6■□□□□ 0.25
VRK3-221ENST00000600284 MED19A0JLT2 244 aaPredicted RBP16.59■□□□□ 0.25
VRK3-221ENST00000600284 PPP1R3GB7ZBB8 358 aa16.59■□□□□ 0.25
VRK3-221ENST00000600284 NEDD8-MDP1E9PL57 170 aa16.59■□□□□ 0.25
VRK3-221ENST00000600284 DCLK1O15075 740 aa16.59■□□□□ 0.25
VRK3-221ENST00000600284 MDM4O15151 490 aa16.59■□□□□ 0.25
VRK3-221ENST00000600284 ZBED1O96006 694 aa16.59■□□□□ 0.25
VRK3-221ENST00000600284 PAEPP09466 180 aa16.59■□□□□ 0.25
VRK3-221ENST00000600284 BMP6P22004 513 aa16.59■□□□□ 0.25
VRK3-221ENST00000600284 CHKAP35790 457 aa16.59■□□□□ 0.25
VRK3-221ENST00000600284 TKTL1P51854 596 aa16.59■□□□□ 0.25
VRK3-221ENST00000600284 BST2Q10589 180 aaKnown RBP16.59■□□□□ 0.25
VRK3-221ENST00000600284 BYSLQ13895 437 aaKnown RBP16.59■□□□□ 0.25
VRK3-221ENST00000600284 CCDC40Q4G0X9 1142 aa16.59■□□□□ 0.25
VRK3-221ENST00000600284 C10orf76Q5T2E6 689 aa16.59■□□□□ 0.25
VRK3-221ENST00000600284 TPGS1Q6ZTW0 290 aa16.59■□□□□ 0.25
VRK3-221ENST00000600284 MIB1Q86YT6 1006 aa16.59■□□□□ 0.25
VRK3-221ENST00000600284 ZNF513Q8N8E2 541 aaPredicted RBP16.59■□□□□ 0.25
VRK3-221ENST00000600284 TPSD1Q9BZJ3 242 aa16.59■□□□□ 0.25
VRK3-221ENST00000600284 DNAJC17Q9NVM6 304 aaKnown RBP16.59■□□□□ 0.25
VRK3-221ENST00000600284 FBXO10Q9UK96 956 aa16.59■□□□□ 0.25
VRK3-221ENST00000600284 SPAG17Q6Q759 2223 aa16.59■□□□□ 0.25
VRK3-221ENST00000600284 EML5Q05BV3 1969 aa16.58■□□□□ 0.25
VRK3-221ENST00000600284 BCLAF3A2AJT9 711 aaKnown RBP16.58■□□□□ 0.24
VRK3-221ENST00000600284 ADAM23O75077 832 aa16.58■□□□□ 0.24
VRK3-221ENST00000600284 GNA14O95837 355 aa16.58■□□□□ 0.24
VRK3-221ENST00000600284 HNRNPLP14866 589 aaKnown RBP eCLIP16.58■□□□□ 0.24
VRK3-221ENST00000600284 CD19P15391 556 aa16.58■□□□□ 0.24
VRK3-221ENST00000600284 GBP1P32455 592 aa16.58■□□□□ 0.24
VRK3-221ENST00000600284 MPLP40238 635 aa16.58■□□□□ 0.24
VRK3-221ENST00000600284 MARSP56192 900 aaKnown RBP16.58■□□□□ 0.24
VRK3-221ENST00000600284 YWHAGP61981 247 aaKnown RBP eCLIP16.58■□□□□ 0.24
VRK3-221ENST00000600284 PDE4CQ08493 712 aa16.58■□□□□ 0.24
VRK3-221ENST00000600284 LRMPQ12912 555 aa16.58■□□□□ 0.24
VRK3-221ENST00000600284 GOLGA7BQ2TAP0 167 aa16.58■□□□□ 0.24
VRK3-221ENST00000600284 AASDHQ4L235 1098 aaPredicted RBP16.58■□□□□ 0.24
VRK3-221ENST00000600284 PMS2CLQ68D20 193 aa16.58■□□□□ 0.24
VRK3-221ENST00000600284 SCML4Q8N228 414 aa16.58■□□□□ 0.24
VRK3-221ENST00000600284 NELFBQ8WX92 580 aa16.58■□□□□ 0.24
VRK3-221ENST00000600284 KCTD13Q8WZ19 329 aa16.58■□□□□ 0.24
VRK3-221ENST00000600284 DDX1Q92499 740 aaKnown RBP16.58■□□□□ 0.24
VRK3-221ENST00000600284 NT5C1BQ96P26 610 aa16.58■□□□□ 0.24
VRK3-221ENST00000600284 LRRC4Q9HBW1 653 aa16.58■□□□□ 0.24
VRK3-221ENST00000600284 OLA1Q9NTK5 396 aaKnown RBP16.58■□□□□ 0.24
VRK3-221ENST00000600284 RASAL2Q9UJF2 1139 aa16.58■□□□□ 0.24
VRK3-221ENST00000600284 STRIP2Q9ULQ0 834 aa16.58■□□□□ 0.24
VRK3-221ENST00000600284 RALGAPA1Q6GYQ0 2036 aa16.58■□□□□ 0.24
VRK3-221ENST00000600284 DCDC2BA2VCK2 349 aa16.57■□□□□ 0.24
VRK3-221ENST00000600284 O00370 1275 aa16.57■□□□□ 0.24
VRK3-221ENST00000600284 GDF9O60383 454 aa16.57■□□□□ 0.24
VRK3-221ENST00000600284 KLKB1P03952 638 aa16.57■□□□□ 0.24
VRK3-221ENST00000600284 CISD3P0C7P0 127 aa16.57■□□□□ 0.24
VRK3-221ENST00000600284 SETSIPP0DME0 302 aa16.57■□□□□ 0.24
VRK3-221ENST00000600284 NTSR1P30989 418 aa16.57■□□□□ 0.24
VRK3-221ENST00000600284 P2RY2P41231 377 aa16.57■□□□□ 0.24
VRK3-221ENST00000600284 DGKGP49619 791 aa16.57■□□□□ 0.24
VRK3-221ENST00000600284 EFEMP1Q12805 493 aa16.57■□□□□ 0.24
VRK3-221ENST00000600284 SF3A2Q15428 464 aaKnown RBP16.57■□□□□ 0.24
VRK3-221ENST00000600284 STILQ15468 1287 aa16.57■□□□□ 0.24
VRK3-221ENST00000600284 SPDYCQ5MJ68 293 aa16.57■□□□□ 0.24
VRK3-221ENST00000600284 SDE2Q6IQ49 451 aa16.57■□□□□ 0.24
VRK3-221ENST00000600284 KLHL10Q6JEL2 608 aa16.57■□□□□ 0.24
VRK3-221ENST00000600284 LCLAT1Q6UWP7 414 aa16.57■□□□□ 0.24
VRK3-221ENST00000600284 RSRC2Q7L4I2 434 aaKnown RBP16.57■□□□□ 0.24
VRK3-221ENST00000600284 TRIML1Q8N9V2 468 aa16.57■□□□□ 0.24
VRK3-221ENST00000600284 LMO3Q8TAP4 145 aa16.57■□□□□ 0.24
VRK3-221ENST00000600284 SPACA7Q96KW9 195 aa16.57■□□□□ 0.24
VRK3-221ENST00000600284 ULBP1Q9BZM6 244 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms