RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 GREM1O60565 184 aa18.7■□□□□ 0.58
SSBP4-207ENST00000600244 ITGB3P05106 788 aa18.7■□□□□ 0.58
SSBP4-207ENST00000600244 TYRP14679 529 aa18.7■□□□□ 0.58
SSBP4-207ENST00000600244 WNT7BP56706 349 aa18.7■□□□□ 0.58
SSBP4-207ENST00000600244 PSMC1P62191 440 aaKnown RBP18.7■□□□□ 0.58
SSBP4-207ENST00000600244 ORC1Q13415 861 aa18.7■□□□□ 0.58
SSBP4-207ENST00000600244 STARD3Q14849 445 aa18.7■□□□□ 0.58
SSBP4-207ENST00000600244 IL17AQ16552 155 aa18.7■□□□□ 0.58
SSBP4-207ENST00000600244 LAYNQ6UX15 382 aa18.7■□□□□ 0.58
SSBP4-207ENST00000600244 HIC2Q96JB3 615 aa18.7■□□□□ 0.58
SSBP4-207ENST00000600244 CNDP2Q96KP4 475 aaKnown RBP18.7■□□□□ 0.58
SSBP4-207ENST00000600244 SLITRK1Q96PX8 696 aa18.7■□□□□ 0.58
SSBP4-207ENST00000600244 NXF1Q9UBU9 619 aaKnown RBP18.7■□□□□ 0.58
SSBP4-207ENST00000600244 AGO2Q9UKV8 859 aaKnown RBP18.7■□□□□ 0.58
SSBP4-207ENST00000600244 CDH9Q9ULB4 789 aa18.7■□□□□ 0.58
SSBP4-207ENST00000600244 SMC3Q9UQE7 1217 aa18.7■□□□□ 0.58
SSBP4-207ENST00000600244 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.7■□□□□ 0.58
SSBP4-207ENST00000600244 NEDD8-MDP1E9PL57 170 aa18.69■□□□□ 0.58
SSBP4-207ENST00000600244 IL18RAPO95256 599 aa18.69■□□□□ 0.58
SSBP4-207ENST00000600244 PLCG1P19174 1290 aa18.69■□□□□ 0.58
SSBP4-207ENST00000600244 ADSSP30520 456 aa18.69■□□□□ 0.58
SSBP4-207ENST00000600244 NUMA1Q14980 2115 aa18.69■□□□□ 0.58
SSBP4-207ENST00000600244 MAPRE1Q15691 268 aaKnown RBP18.69■□□□□ 0.58
SSBP4-207ENST00000600244 HYIQ5T013 277 aa18.69■□□□□ 0.58
SSBP4-207ENST00000600244 BROXQ5VW32 411 aa18.69■□□□□ 0.58
SSBP4-207ENST00000600244 FBXO18Q8NFZ0 1043 aa18.69■□□□□ 0.58
SSBP4-207ENST00000600244 KBTBD7Q8WVZ9 684 aa18.69■□□□□ 0.58
SSBP4-207ENST00000600244 PRCCQ92733 491 aaPredicted RBP18.69■□□□□ 0.58
SSBP4-207ENST00000600244 PCED1BQ96HM7 432 aa18.69■□□□□ 0.58
SSBP4-207ENST00000600244 BBS2Q9BXC9 721 aa18.69■□□□□ 0.58
SSBP4-207ENST00000600244 C6orf106Q9H6K1 298 aaPredicted RBP18.69■□□□□ 0.58
SSBP4-207ENST00000600244 TMEM30AQ9NV96 361 aa18.69■□□□□ 0.58
SSBP4-207ENST00000600244 WDR35Q9P2L0 1181 aa18.69■□□□□ 0.58
SSBP4-207ENST00000600244 KRT10P13645 584 aa18.68■□□□□ 0.58
SSBP4-207ENST00000600244 ACO1P21399 889 aaKnown RBP18.68■□□□□ 0.58
SSBP4-207ENST00000600244 COPAP53621 1224 aa18.68■□□□□ 0.58
SSBP4-207ENST00000600244 GTF2BQ00403 316 aa18.68■□□□□ 0.58
SSBP4-207ENST00000600244 BECN1Q14457 450 aa18.68■□□□□ 0.58
SSBP4-207ENST00000600244 SNX30Q5VWJ9 437 aa18.68■□□□□ 0.58
SSBP4-207ENST00000600244 SLFN12LQ6IEE8 588 aa18.68■□□□□ 0.58
SSBP4-207ENST00000600244 HTR3DQ70Z44 454 aa18.68■□□□□ 0.58
SSBP4-207ENST00000600244 DPH6Q7L8W6 267 aa18.68■□□□□ 0.58
SSBP4-207ENST00000600244 GATAD2AQ86YP4 633 aa18.68■□□□□ 0.58
SSBP4-207ENST00000600244 KCTD17Q8N5Z5 321 aa18.68■□□□□ 0.58
SSBP4-207ENST00000600244 FAM184AQ8NB25 1140 aa18.68■□□□□ 0.58
SSBP4-207ENST00000600244 RFFLQ8WZ73 363 aa18.68■□□□□ 0.58
SSBP4-207ENST00000600244 SNX19Q92543 992 aa18.68■□□□□ 0.58
SSBP4-207ENST00000600244 NAF1Q96HR8 494 aaKnown RBP18.68■□□□□ 0.58
SSBP4-207ENST00000600244 FIZ1Q96SL8 496 aa18.68■□□□□ 0.58
SSBP4-207ENST00000600244 THAP10Q9P2Z0 257 aaPredicted RBP18.68■□□□□ 0.58
SSBP4-207ENST00000600244 FBXO10Q9UK96 956 aa18.68■□□□□ 0.58
SSBP4-207ENST00000600244 ODF2LQ9ULJ1 636 aa18.68■□□□□ 0.58
SSBP4-207ENST00000600244 K7ENM7 598 aa18.67■□□□□ 0.58
SSBP4-207ENST00000600244 PLA2G4BP0C869 781 aa18.67■□□□□ 0.58
SSBP4-207ENST00000600244 TRAPPC10P48553 1259 aa18.67■□□□□ 0.58
SSBP4-207ENST00000600244 DGKGP49619 791 aa18.67■□□□□ 0.58
SSBP4-207ENST00000600244 ZNF131P52739 623 aa18.67■□□□□ 0.58
SSBP4-207ENST00000600244 CACNA2D1P54289 1103 aa18.67■□□□□ 0.58
SSBP4-207ENST00000600244 TFAMQ00059 246 aaKnown RBP18.67■□□□□ 0.58
SSBP4-207ENST00000600244 GUCY1B3Q02153 619 aa18.67■□□□□ 0.58
SSBP4-207ENST00000600244 CYP27A1Q02318 531 aa18.67■□□□□ 0.58
SSBP4-207ENST00000600244 HECTD3Q5T447 861 aa18.67■□□□□ 0.58
SSBP4-207ENST00000600244 PRICKLE2Q7Z3G6 844 aa18.67■□□□□ 0.58
SSBP4-207ENST00000600244 CSGALNACT2Q8N6G5 542 aa18.67■□□□□ 0.58
SSBP4-207ENST00000600244 DCBLD1Q8N8Z6 715 aa18.67■□□□□ 0.58
SSBP4-207ENST00000600244 MYCBPAPQ8TBZ2 947 aa18.67■□□□□ 0.58
SSBP4-207ENST00000600244 OVCA2Q8WZ82 227 aa18.67■□□□□ 0.58
SSBP4-207ENST00000600244 C8orf76Q96K31 380 aa18.67■□□□□ 0.58
SSBP4-207ENST00000600244 ORAI3Q9BRQ5 295 aa18.67■□□□□ 0.58
SSBP4-207ENST00000600244 FOXP1Q9H334 677 aaPredicted RBP18.67■□□□□ 0.58
SSBP4-207ENST00000600244 CHORDC1Q9UHD1 332 aaPredicted RBP18.67■□□□□ 0.58
SSBP4-207ENST00000600244 SSUH2Q9Y2M2 353 aa18.67■□□□□ 0.58
SSBP4-207ENST00000600244 KIF3AQ9Y496 699 aa18.67■□□□□ 0.58
SSBP4-207ENST00000600244 AHCTF1Q8WYP5 2266 aa18.66■□□□□ 0.58
SSBP4-207ENST00000600244 NPC1O15118 1278 aa18.66■□□□□ 0.58
SSBP4-207ENST00000600244 GLDCP23378 1020 aa18.66■□□□□ 0.58
SSBP4-207ENST00000600244 YWHAQP27348 245 aa18.66■□□□□ 0.58
SSBP4-207ENST00000600244 ACSL1P33121 698 aa18.66■□□□□ 0.58
SSBP4-207ENST00000600244 PCBP4P57723 403 aaKnown RBP18.66■□□□□ 0.58
SSBP4-207ENST00000600244 VAC14Q08AM6 782 aa18.66■□□□□ 0.58
SSBP4-207ENST00000600244 ILKQ13418 452 aa18.66■□□□□ 0.58
SSBP4-207ENST00000600244 SHBQ15464 509 aa18.66■□□□□ 0.58
SSBP4-207ENST00000600244 FAM124AQ86V42 546 aa18.66■□□□□ 0.58
SSBP4-207ENST00000600244 PDZD8Q8NEN9 1154 aa18.66■□□□□ 0.58
SSBP4-207ENST00000600244 BIRC7Q96CA5 298 aa18.66■□□□□ 0.58
SSBP4-207ENST00000600244 REEP2Q9BRK0 252 aa18.66■□□□□ 0.58
SSBP4-207ENST00000600244 CCSER2Q9H7U1 834 aa18.66■□□□□ 0.58
SSBP4-207ENST00000600244 SIX4Q9UIU6 781 aa18.66■□□□□ 0.58
SSBP4-207ENST00000600244 MYO9AB2RTY4 2548 aa18.66■□□□□ 0.58
SSBP4-207ENST00000600244 LAD1O00515 517 aa18.65■□□□□ 0.58
SSBP4-207ENST00000600244 TERTO14746 1132 aaKnown RBP18.65■□□□□ 0.58
SSBP4-207ENST00000600244 TSPAN3O60637 253 aa18.65■□□□□ 0.58
SSBP4-207ENST00000600244 PDGFRBP09619 1106 aa18.65■□□□□ 0.58
SSBP4-207ENST00000600244 C7P10643 843 aa18.65■□□□□ 0.58
SSBP4-207ENST00000600244 ACADMP11310 421 aa18.65■□□□□ 0.58
SSBP4-207ENST00000600244 CD27P26842 260 aa18.65■□□□□ 0.58
SSBP4-207ENST00000600244 TUBP50607 506 aa18.65■□□□□ 0.58
SSBP4-207ENST00000600244 PRAMEF14Q5SWL7 426 aa18.65■□□□□ 0.58
SSBP4-207ENST00000600244 TPGS1Q6ZTW0 290 aa18.65■□□□□ 0.58
SSBP4-207ENST00000600244 MYCT1Q8N699 235 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms