RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 NIPA2Q8N8Q9 360 aa12.84□□□□□ -0.35
TGFB1-204ENST00000600196 ATXN2LQ8WWM7 1075 aaKnown RBP12.84□□□□□ -0.35
TGFB1-204ENST00000600196 NPY6RQ99463 290 aa12.84□□□□□ -0.35
TGFB1-204ENST00000600196 CNPY3Q9BT09 278 aa12.84□□□□□ -0.35
TGFB1-204ENST00000600196 PHF7Q9BWX1 381 aaPredicted RBP12.84□□□□□ -0.35
TGFB1-204ENST00000600196 DCLK3Q9C098 648 aa12.84□□□□□ -0.35
TGFB1-204ENST00000600196 SMOC2Q9H3U7 446 aa12.84□□□□□ -0.35
TGFB1-204ENST00000600196 NMUR1Q9HB89 426 aa12.84□□□□□ -0.35
TGFB1-204ENST00000600196 NR2E1Q9Y466 385 aa12.84□□□□□ -0.35
TGFB1-204ENST00000600196 USP15Q9Y4E8 981 aaPredicted RBP12.84□□□□□ -0.35
TGFB1-204ENST00000600196 A0A1W2PRU2 124 aa12.83□□□□□ -0.36
TGFB1-204ENST00000600196 GRXCR2A6NFK2 248 aa12.83□□□□□ -0.36
TGFB1-204ENST00000600196 TADA3O75528 432 aa12.83□□□□□ -0.36
TGFB1-204ENST00000600196 NCAM1P13591 858 aa12.83□□□□□ -0.36
TGFB1-204ENST00000600196 PDGFRAP16234 1089 aa12.83□□□□□ -0.36
TGFB1-204ENST00000600196 GPD1P21695 349 aa12.83□□□□□ -0.36
TGFB1-204ENST00000600196 KCNA5P22460 613 aa12.83□□□□□ -0.36
TGFB1-204ENST00000600196 RFC1P35251 1148 aaPredicted RBP12.83□□□□□ -0.36
TGFB1-204ENST00000600196 PCK1P35558 622 aa12.83□□□□□ -0.36
TGFB1-204ENST00000600196 AVPR1AP37288 418 aa12.83□□□□□ -0.36
TGFB1-204ENST00000600196 SLC1A1P43005 524 aa12.83□□□□□ -0.36
TGFB1-204ENST00000600196 PPP2R5DQ14738 602 aa12.83□□□□□ -0.36
TGFB1-204ENST00000600196 BRMS1LQ5PSV4 323 aa12.83□□□□□ -0.36
TGFB1-204ENST00000600196 GPR158Q5T848 1215 aa12.83□□□□□ -0.36
TGFB1-204ENST00000600196 NUGGCQ68CJ6 796 aa12.83□□□□□ -0.36
TGFB1-204ENST00000600196 MTSS1LQ765P7 747 aa12.83□□□□□ -0.36
TGFB1-204ENST00000600196 RSRC2Q7L4I2 434 aaKnown RBP12.83□□□□□ -0.36
TGFB1-204ENST00000600196 KIAA1328Q86T90 577 aa12.83□□□□□ -0.36
TGFB1-204ENST00000600196 PSTKQ8IV42 348 aaKnown RBP12.83□□□□□ -0.36
TGFB1-204ENST00000600196 ZDHHC14Q8IZN3 488 aa12.83□□□□□ -0.36
TGFB1-204ENST00000600196 DEFB106AQ8N104 65 aa12.83□□□□□ -0.36
TGFB1-204ENST00000600196 SLC35G2Q8TBE7 412 aa12.83□□□□□ -0.36
TGFB1-204ENST00000600196 FGF13Q92913 245 aa12.83□□□□□ -0.36
TGFB1-204ENST00000600196 SMARCD2Q92925 531 aa12.83□□□□□ -0.36
TGFB1-204ENST00000600196 PLD4Q96BZ4 506 aa12.83□□□□□ -0.36
TGFB1-204ENST00000600196 OTUB2Q96DC9 234 aa12.83□□□□□ -0.36
TGFB1-204ENST00000600196 SLC46A2Q9BY10 475 aa12.83□□□□□ -0.36
TGFB1-204ENST00000600196 RETREG1Q9H6L5 497 aa12.83□□□□□ -0.36
TGFB1-204ENST00000600196 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.83□□□□□ -0.36
TGFB1-204ENST00000600196 HCFC1R1Q9NWW0 138 aa12.83□□□□□ -0.36
TGFB1-204ENST00000600196 TLR6Q9Y2C9 796 aa12.83□□□□□ -0.36
TGFB1-204ENST00000600196 ZNF638Q14966 1978 aaKnown RBP12.83□□□□□ -0.36
TGFB1-204ENST00000600196 E2F8A0AVK6 867 aa12.82□□□□□ -0.36
TGFB1-204ENST00000600196 COCHO43405 550 aa12.82□□□□□ -0.36
TGFB1-204ENST00000600196 RNF8O76064 485 aa12.82□□□□□ -0.36
TGFB1-204ENST00000600196 ABCB4P21439 1286 aa12.82□□□□□ -0.36
TGFB1-204ENST00000600196 CCR2P41597 374 aa12.82□□□□□ -0.36
TGFB1-204ENST00000600196 ZNF135P52742 658 aaPredicted RBP12.82□□□□□ -0.36
TGFB1-204ENST00000600196 TRIP4Q15650 581 aaPredicted RBP12.82□□□□□ -0.36
TGFB1-204ENST00000600196 CCDC85BQ15834 202 aaPredicted RBP12.82□□□□□ -0.36
TGFB1-204ENST00000600196 SLC5A9Q2M3M2 681 aa12.82□□□□□ -0.36
TGFB1-204ENST00000600196 DCAF6Q58WW2 860 aa12.82□□□□□ -0.36
TGFB1-204ENST00000600196 C10orf120Q5SQS8 335 aa12.82□□□□□ -0.36
TGFB1-204ENST00000600196 EP400NLQ6ZTU2 488 aa12.82□□□□□ -0.36
TGFB1-204ENST00000600196 SND1Q7KZF4 910 aaKnown RBP eCLIP12.82□□□□□ -0.36
TGFB1-204ENST00000600196 NPAS3Q8IXF0 933 aa12.82□□□□□ -0.36
TGFB1-204ENST00000600196 CELF5Q8N6W0 485 aaKnown RBP12.82□□□□□ -0.36
TGFB1-204ENST00000600196 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.82□□□□□ -0.36
TGFB1-204ENST00000600196 CLEC4CQ8WTT0 213 aa12.82□□□□□ -0.36
TGFB1-204ENST00000600196 RXFP2Q8WXD0 754 aa12.82□□□□□ -0.36
TGFB1-204ENST00000600196 NUP85Q9BW27 656 aa12.82□□□□□ -0.36
TGFB1-204ENST00000600196 NACA2Q9H009 215 aa12.82□□□□□ -0.36
TGFB1-204ENST00000600196 METTL5Q9NRN9 209 aaKnown RBP12.82□□□□□ -0.36
TGFB1-204ENST00000600196 TDP1Q9NUW8 608 aa12.82□□□□□ -0.36
TGFB1-204ENST00000600196 OSER1Q9NX31 292 aa12.82□□□□□ -0.36
TGFB1-204ENST00000600196 MARCH2Q9P0N8 246 aa12.82□□□□□ -0.36
TGFB1-204ENST00000600196 CTTNBP2NLQ9P2B4 639 aa12.82□□□□□ -0.36
TGFB1-204ENST00000600196 TBC1D14Q9P2M4 693 aa12.82□□□□□ -0.36
TGFB1-204ENST00000600196 TJP2Q9UDY2 1190 aa12.82□□□□□ -0.36
TGFB1-204ENST00000600196 SLC12A6Q9UHW9 1150 aa12.82□□□□□ -0.36
TGFB1-204ENST00000600196 REXO2Q9Y3B8 237 aaKnown RBP12.82□□□□□ -0.36
TGFB1-204ENST00000600196 BRWD1Q9NSI6 2320 aa12.81□□□□□ -0.36
TGFB1-204ENST00000600196 GOLGA8SH3BPF8 625 aa12.81□□□□□ -0.36
TGFB1-204ENST00000600196 SLC9A3R1O14745 358 aaPredicted RBP12.81□□□□□ -0.36
TGFB1-204ENST00000600196 ECI2O75521 394 aa12.81□□□□□ -0.36
TGFB1-204ENST00000600196 TRUB2O95900 331 aaKnown RBP12.81□□□□□ -0.36
TGFB1-204ENST00000600196 IGLV3-27P01718 113 aa12.81□□□□□ -0.36
TGFB1-204ENST00000600196 LAMP2P13473 410 aa12.81□□□□□ -0.36
TGFB1-204ENST00000600196 CCR1P32246 355 aa12.81□□□□□ -0.36
TGFB1-204ENST00000600196 CXCR3P49682 368 aa12.81□□□□□ -0.36
TGFB1-204ENST00000600196 IFRD2Q12894 506 aaPredicted RBP12.81□□□□□ -0.36
TGFB1-204ENST00000600196 MTF1Q14872 753 aa12.81□□□□□ -0.36
TGFB1-204ENST00000600196 TEAD2Q15562 447 aa12.81□□□□□ -0.36
TGFB1-204ENST00000600196 CCDC14Q49A88 953 aa12.81□□□□□ -0.36
TGFB1-204ENST00000600196 BOLA3Q53S33 107 aa12.81□□□□□ -0.36
TGFB1-204ENST00000600196 LRRC38Q5VT99 294 aa12.81□□□□□ -0.36
TGFB1-204ENST00000600196 SYPL2Q5VXT5 272 aa12.81□□□□□ -0.36
TGFB1-204ENST00000600196 TXNDC8Q6A555 127 aa12.81□□□□□ -0.36
TGFB1-204ENST00000600196 HFE2Q6ZVN8 426 aa12.81□□□□□ -0.36
TGFB1-204ENST00000600196 HTR3DQ70Z44 454 aa12.81□□□□□ -0.36
TGFB1-204ENST00000600196 GPIHBP1Q8IV16 184 aa12.81□□□□□ -0.36
TGFB1-204ENST00000600196 SYCE1Q8N0S2 351 aa12.81□□□□□ -0.36
TGFB1-204ENST00000600196 MAB21L3Q8N8X9 362 aa12.81□□□□□ -0.36
TGFB1-204ENST00000600196 ZNF564Q8TBZ8 553 aaPredicted RBP12.81□□□□□ -0.36
TGFB1-204ENST00000600196 DQX1Q8TE96 717 aaKnown RBP12.81□□□□□ -0.36
TGFB1-204ENST00000600196 DEPDC1BQ8WUY9 529 aa12.81□□□□□ -0.36
TGFB1-204ENST00000600196 NTAN1Q96AB6 310 aa12.81□□□□□ -0.36
TGFB1-204ENST00000600196 ELSPBP1Q96BH3 223 aa12.81□□□□□ -0.36
TGFB1-204ENST00000600196 SLC39A13Q96H72 371 aa12.81□□□□□ -0.36
TGFB1-204ENST00000600196 C1orf74Q96LT6 269 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms