RNA–Protein interactions for RNA: ENST00000600190.1

FARP1-229, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-229ENST00000600190 TRIM24O15164 1050 aa19.9■□□□□ 0.78
FARP1-229ENST00000600190 TLR5O60602 858 aa19.9■□□□□ 0.78
FARP1-229ENST00000600190 SPINK2P20155 84 aa19.9■□□□□ 0.78
FARP1-229ENST00000600190 CSRP1P21291 193 aaKnown RBP19.9■□□□□ 0.78
FARP1-229ENST00000600190 WASP42768 502 aa19.9■□□□□ 0.78
FARP1-229ENST00000600190 NDST1P52848 882 aa19.9■□□□□ 0.78
FARP1-229ENST00000600190 TPD52L1Q16890 204 aaPredicted RBP19.9■□□□□ 0.78
FARP1-229ENST00000600190 LYSMD4Q5XG99 296 aa19.9■□□□□ 0.78
FARP1-229ENST00000600190 INTS8Q75QN2 995 aaKnown RBP19.9■□□□□ 0.78
FARP1-229ENST00000600190 DEFB119Q8N690 84 aa19.9■□□□□ 0.78
FARP1-229ENST00000600190 TERB1Q8NA31 727 aa19.9■□□□□ 0.78
FARP1-229ENST00000600190 DEFB124Q8NES8 71 aa19.9■□□□□ 0.78
FARP1-229ENST00000600190 ZMIZ2Q8NF64 920 aa19.9■□□□□ 0.78
FARP1-229ENST00000600190 KCNV2Q8TDN2 545 aa19.9■□□□□ 0.78
FARP1-229ENST00000600190 FBXO44Q9H4M3 255 aa19.9■□□□□ 0.78
FARP1-229ENST00000600190 TLR8Q9NR97 1041 aaKnown RBP19.9■□□□□ 0.78
FARP1-229ENST00000600190 FAM49BQ9NUQ9 324 aa19.9■□□□□ 0.78
FARP1-229ENST00000600190 ATXN2Q99700 1313 aaKnown RBP19.9■□□□□ 0.78
FARP1-229ENST00000600190 C1QTNF9BB2RNN3 333 aa19.89■□□□□ 0.77
FARP1-229ENST00000600190 TBX18O95935 607 aa19.89■□□□□ 0.77
FARP1-229ENST00000600190 PROS1P07225 676 aa19.89■□□□□ 0.77
FARP1-229ENST00000600190 C1QTNF9P0C862 333 aa19.89■□□□□ 0.77
FARP1-229ENST00000600190 HOXB2P14652 356 aa19.89■□□□□ 0.77
FARP1-229ENST00000600190 PAK1Q13153 545 aa19.89■□□□□ 0.77
FARP1-229ENST00000600190 SPDYCQ5MJ68 293 aa19.89■□□□□ 0.77
FARP1-229ENST00000600190 CCDC183Q5T5S1 534 aa19.89■□□□□ 0.77
FARP1-229ENST00000600190 ANKRD40Q6AI12 368 aa19.89■□□□□ 0.77
FARP1-229ENST00000600190 FAM186BQ8IYM0 893 aa19.89■□□□□ 0.77
FARP1-229ENST00000600190 C12orf29Q8N999 325 aa19.89■□□□□ 0.77
FARP1-229ENST00000600190 NELFBQ8WX92 580 aa19.89■□□□□ 0.77
FARP1-229ENST00000600190 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.89■□□□□ 0.77
FARP1-229ENST00000600190 HMGXB4Q9UGU5 601 aa19.89■□□□□ 0.77
FARP1-229ENST00000600190 MYO18AQ92614 2054 aaKnown RBP19.88■□□□□ 0.77
FARP1-229ENST00000600190 MYH10P35580 1976 aa19.88■□□□□ 0.77
FARP1-229ENST00000600190 NEDD8-MDP1E9PL57 170 aa19.88■□□□□ 0.77
FARP1-229ENST00000600190 STX10O60499 249 aa19.88■□□□□ 0.77
FARP1-229ENST00000600190 CFIP05156 583 aa19.88■□□□□ 0.77
FARP1-229ENST00000600190 ENGP17813 658 aa19.88■□□□□ 0.77
FARP1-229ENST00000600190 GABRG2P18507 467 aa19.88■□□□□ 0.77
FARP1-229ENST00000600190 ITPKAP23677 461 aa19.88■□□□□ 0.77
FARP1-229ENST00000600190 ADORA2BP29275 332 aa19.88■□□□□ 0.77
FARP1-229ENST00000600190 NTSR1P30989 418 aa19.88■□□□□ 0.77
FARP1-229ENST00000600190 RPL6Q02878 288 aaKnown RBP19.88■□□□□ 0.77
FARP1-229ENST00000600190 SKOR2Q2VWA4 1001 aaPredicted RBP19.88■□□□□ 0.77
FARP1-229ENST00000600190 GRAMD4Q6IC98 578 aa19.88■□□□□ 0.77
FARP1-229ENST00000600190 SPOPLQ6IQ16 392 aa19.88■□□□□ 0.77
FARP1-229ENST00000600190 HTR3DQ70Z44 454 aa19.88■□□□□ 0.77
FARP1-229ENST00000600190 CRYBG2Q8N1P7 616 aa19.88■□□□□ 0.77
FARP1-229ENST00000600190 TMC2Q8TDI7 906 aa19.88■□□□□ 0.77
FARP1-229ENST00000600190 JAKMIP2Q96AA8 810 aa19.88■□□□□ 0.77
FARP1-229ENST00000600190 ERLEC1Q96DZ1 483 aa19.88■□□□□ 0.77
FARP1-229ENST00000600190 DUSP9Q99956 384 aaKnown RBP19.88■□□□□ 0.77
FARP1-229ENST00000600190 CSNK1G1Q9HCP0 422 aa19.88■□□□□ 0.77
FARP1-229ENST00000600190 DNAJC17Q9NVM6 304 aaKnown RBP19.88■□□□□ 0.77
FARP1-229ENST00000600190 PILRBQ9UKJ0 227 aa19.88■□□□□ 0.77
FARP1-229ENST00000600190 HCN2Q9UL51 889 aa19.88■□□□□ 0.77
FARP1-229ENST00000600190 CTNND2Q9UQB3 1225 aa19.88■□□□□ 0.77
FARP1-229ENST00000600190 PPP1R3GB7ZBB8 358 aa19.87■□□□□ 0.77
FARP1-229ENST00000600190 IKBKBO14920 756 aa19.87■□□□□ 0.77
FARP1-229ENST00000600190 ZBTB24O43167 697 aaPredicted RBP19.87■□□□□ 0.77
FARP1-229ENST00000600190 AP5Z1O43299 807 aa19.87■□□□□ 0.77
FARP1-229ENST00000600190 TOP3BO95985 862 aaKnown RBP19.87■□□□□ 0.77
FARP1-229ENST00000600190 ATP5C1P36542 298 aaKnown RBP19.87■□□□□ 0.77
FARP1-229ENST00000600190 DPP6P42658 865 aa19.87■□□□□ 0.77
FARP1-229ENST00000600190 VAMP7P51809 220 aa19.87■□□□□ 0.77
FARP1-229ENST00000600190 GOLGA8FQ08AF8 430 aa19.87■□□□□ 0.77
FARP1-229ENST00000600190 GOLGA8DPQ0D2H9 430 aa19.87■□□□□ 0.77
FARP1-229ENST00000600190 ZACNQ401N2 412 aa19.87■□□□□ 0.77
FARP1-229ENST00000600190 SDE2Q6IQ49 451 aa19.87■□□□□ 0.77
FARP1-229ENST00000600190 SLC23A3Q6PIS1 610 aa19.87■□□□□ 0.77
FARP1-229ENST00000600190 UNQ6494/PRO21346Q6UXR6 183 aa19.87■□□□□ 0.77
FARP1-229ENST00000600190 TPGS1Q6ZTW0 290 aa19.87■□□□□ 0.77
FARP1-229ENST00000600190 SV2AQ7L0J3 742 aa19.87■□□□□ 0.77
FARP1-229ENST00000600190 UNC93AQ86WB7 457 aa19.87■□□□□ 0.77
FARP1-229ENST00000600190 MIB1Q86YT6 1006 aa19.87■□□□□ 0.77
FARP1-229ENST00000600190 TAF4BQ92750 862 aa19.87■□□□□ 0.77
FARP1-229ENST00000600190 XPO6Q96QU8 1125 aaKnown RBP19.87■□□□□ 0.77
FARP1-229ENST00000600190 BBS2Q9BXC9 721 aa19.87■□□□□ 0.77
FARP1-229ENST00000600190 KLF16Q9BXK1 252 aaPredicted RBP19.87■□□□□ 0.77
FARP1-229ENST00000600190 METTL14Q9HCE5 456 aaKnown RBP19.87■□□□□ 0.77
FARP1-229ENST00000600190 FSCN3Q9NQT6 498 aa19.87■□□□□ 0.77
FARP1-229ENST00000600190 CALCOCO1Q9P1Z2 691 aa19.87■□□□□ 0.77
FARP1-229ENST00000600190 STARD13Q9Y3M8 1113 aa19.87■□□□□ 0.77
FARP1-229ENST00000600190 TNRC6BQ9UPQ9 1833 aaKnown RBP19.87■□□□□ 0.77
FARP1-229ENST00000600190 ZZEF1O43149 2961 aa19.87■□□□□ 0.77
FARP1-229ENST00000600190 CYP26A1O43174 497 aa19.86■□□□□ 0.77
FARP1-229ENST00000600190 LETM1O95202 739 aaPredicted RBP19.86■□□□□ 0.77
FARP1-229ENST00000600190 FAM200BP0CF97 657 aa19.86■□□□□ 0.77
FARP1-229ENST00000600190 TYRP14679 529 aa19.86■□□□□ 0.77
FARP1-229ENST00000600190 TRIM21P19474 475 aaKnown RBP19.86■□□□□ 0.77
FARP1-229ENST00000600190 PIK3CAP42336 1068 aa19.86■□□□□ 0.77
FARP1-229ENST00000600190 ASPAP45381 313 aa19.86■□□□□ 0.77
FARP1-229ENST00000600190 ATXN3P54252 364 aaPredicted RBP19.86■□□□□ 0.77
FARP1-229ENST00000600190 ENPEPQ07075 957 aa19.86■□□□□ 0.77
FARP1-229ENST00000600190 CCDC40Q4G0X9 1142 aa19.86■□□□□ 0.77
FARP1-229ENST00000600190 ZCWPW2Q504Y3 356 aa19.86■□□□□ 0.77
FARP1-229ENST00000600190 CT47A1Q5JQC4 288 aaPredicted RBP19.86■□□□□ 0.77
FARP1-229ENST00000600190 EGFLAMQ63HQ2 1017 aa19.86■□□□□ 0.77
FARP1-229ENST00000600190 FOXR2Q6PJQ5 311 aa19.86■□□□□ 0.77
FARP1-229ENST00000600190 SLC36A4Q6YBV0 504 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms