RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 HTR3DQ70Z44 454 aa15.48■□□□□ 0.07
IRF3-223ENST00000599223 SYT12Q8IV01 421 aa15.48■□□□□ 0.07
IRF3-223ENST00000599223 PGBD3Q8N328 593 aa15.48■□□□□ 0.07
IRF3-223ENST00000599223 DEFB124Q8NES8 71 aa15.48■□□□□ 0.07
IRF3-223ENST00000599223 BHMTQ93088 406 aa15.48■□□□□ 0.07
IRF3-223ENST00000599223 HNRNPABQ99729 332 aaKnown RBP15.48■□□□□ 0.07
IRF3-223ENST00000599223 BBS2Q9BXC9 721 aa15.48■□□□□ 0.07
IRF3-223ENST00000599223 SLC6A17Q9H1V8 727 aa15.48■□□□□ 0.07
IRF3-223ENST00000599223 MARK1Q9P0L2 795 aa15.48■□□□□ 0.07
IRF3-223ENST00000599223 PILRBQ9UKJ0 227 aa15.48■□□□□ 0.07
IRF3-223ENST00000599223 CFAP45Q9UL16 551 aa15.48■□□□□ 0.07
IRF3-223ENST00000599223 MAPK8IP1Q9UQF2 711 aa15.48■□□□□ 0.07
IRF3-223ENST00000599223 TRAF3IP3Q9Y228 551 aa15.48■□□□□ 0.07
IRF3-223ENST00000599223 RAD54BQ9Y620 910 aa15.48■□□□□ 0.07
IRF3-223ENST00000599223 CKAP5Q14008 2032 aa15.48■□□□□ 0.07
IRF3-223ENST00000599223 FREM2Q5SZK8 3169 aa15.47■□□□□ 0.07
IRF3-223ENST00000599223 MUC22E2RYF6 1773 aaPredicted RBP15.47■□□□□ 0.07
IRF3-223ENST00000599223 IKBKBO14920 756 aa15.47■□□□□ 0.07
IRF3-223ENST00000599223 MAP3K13O43283 966 aa15.47■□□□□ 0.07
IRF3-223ENST00000599223 PDIA4P13667 645 aaKnown RBP15.47■□□□□ 0.07
IRF3-223ENST00000599223 ENGP17813 658 aa15.47■□□□□ 0.07
IRF3-223ENST00000599223 CD58P19256 250 aa15.47■□□□□ 0.07
IRF3-223ENST00000599223 NDUFV2P19404 249 aa15.47■□□□□ 0.07
IRF3-223ENST00000599223 ACO1P21399 889 aaKnown RBP15.47■□□□□ 0.07
IRF3-223ENST00000599223 CMA1P23946 247 aa15.47■□□□□ 0.07
IRF3-223ENST00000599223 NR2F2P24468 414 aa15.47■□□□□ 0.07
IRF3-223ENST00000599223 Q6ZNB5 142 aa15.47■□□□□ 0.07
IRF3-223ENST00000599223 SCD5Q86SK9 330 aa15.47■□□□□ 0.07
IRF3-223ENST00000599223 TMEM121BQ9BXQ6 578 aaPredicted RBP15.47■□□□□ 0.07
IRF3-223ENST00000599223 NIF3L1Q9GZT8 377 aa15.47■□□□□ 0.07
IRF3-223ENST00000599223 MMRN2Q9H8L6 949 aa15.47■□□□□ 0.07
IRF3-223ENST00000599223 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.47■□□□□ 0.07
IRF3-223ENST00000599223 RALYQ9UKM9 306 aaKnown RBP15.47■□□□□ 0.07
IRF3-223ENST00000599223 ZDHHC9Q9Y397 364 aa15.47■□□□□ 0.07
IRF3-223ENST00000599223 STARD13Q9Y3M8 1113 aa15.47■□□□□ 0.07
IRF3-223ENST00000599223 IGHV1OR15-9A0A0B4J2B8 117 aa15.46■□□□□ 0.07
IRF3-223ENST00000599223 CILPO75339 1184 aa15.46■□□□□ 0.07
IRF3-223ENST00000599223 KLKB1P03952 638 aa15.46■□□□□ 0.07
IRF3-223ENST00000599223 RARGP13631 454 aa15.46■□□□□ 0.07
IRF3-223ENST00000599223 CSRP1P21291 193 aaKnown RBP15.46■□□□□ 0.07
IRF3-223ENST00000599223 NTSR1P30989 418 aa15.46■□□□□ 0.07
IRF3-223ENST00000599223 ATP5C1P36542 298 aaKnown RBP15.46■□□□□ 0.07
IRF3-223ENST00000599223 NDUFA8P51970 172 aa15.46■□□□□ 0.07
IRF3-223ENST00000599223 KIF11P52732 1056 aa15.46■□□□□ 0.07
IRF3-223ENST00000599223 RPL6Q02878 288 aaKnown RBP15.46■□□□□ 0.07
IRF3-223ENST00000599223 ZCWPW2Q504Y3 356 aa15.46■□□□□ 0.07
IRF3-223ENST00000599223 TRMT11Q7Z4G4 463 aaKnown RBP15.46■□□□□ 0.07
IRF3-223ENST00000599223 SLC41A1Q8IVJ1 513 aa15.46■□□□□ 0.07
IRF3-223ENST00000599223 OR2I1PQ8NGU4 316 aa15.46■□□□□ 0.07
IRF3-223ENST00000599223 KCNV2Q8TDN2 545 aa15.46■□□□□ 0.07
IRF3-223ENST00000599223 IPO4Q8TEX9 1081 aaKnown RBP15.46■□□□□ 0.07
IRF3-223ENST00000599223 SEMA4DQ92854 862 aa15.46■□□□□ 0.07
IRF3-223ENST00000599223 CYFIP2Q96F07 1278 aa15.46■□□□□ 0.07
IRF3-223ENST00000599223 ARID3AQ99856 593 aa15.46■□□□□ 0.07
IRF3-223ENST00000599223 GABRG3Q99928 467 aa15.46■□□□□ 0.07
IRF3-223ENST00000599223 NT5C1AQ9BXI3 368 aa15.46■□□□□ 0.07
IRF3-223ENST00000599223 GOLPH3LQ9H4A5 285 aa15.46■□□□□ 0.07
IRF3-223ENST00000599223 CACNA2D2Q9NY47 1150 aa15.46■□□□□ 0.07
IRF3-223ENST00000599223 PLK2Q9NYY3 685 aa15.46■□□□□ 0.07
IRF3-223ENST00000599223 FRMD4BQ9Y2L6 1034 aa15.46■□□□□ 0.07
IRF3-223ENST00000599223 ZFYVE26Q68DK2 2539 aa15.45■□□□□ 0.06
IRF3-223ENST00000599223 FAM237AA0A1B0GTK4 181 aa15.45■□□□□ 0.06
IRF3-223ENST00000599223 MAPK13O15264 365 aa15.45■□□□□ 0.06
IRF3-223ENST00000599223 CALUO43852 315 aaPredicted RBP15.45■□□□□ 0.06
IRF3-223ENST00000599223 STC2O76061 302 aa15.45■□□□□ 0.06
IRF3-223ENST00000599223 RHOBTB3O94955 611 aa15.45■□□□□ 0.06
IRF3-223ENST00000599223 CFIP05156 583 aa15.45■□□□□ 0.06
IRF3-223ENST00000599223 CISD3P0C7P0 127 aa15.45■□□□□ 0.06
IRF3-223ENST00000599223 DPYDQ12882 1025 aa15.45■□□□□ 0.06
IRF3-223ENST00000599223 NFIL3Q16649 462 aa15.45■□□□□ 0.06
IRF3-223ENST00000599223 C10orf120Q5SQS8 335 aa15.45■□□□□ 0.06
IRF3-223ENST00000599223 PPP1R26Q5T8A7 1209 aaPredicted RBP15.45■□□□□ 0.06
IRF3-223ENST00000599223 KLHDC10Q6PID8 442 aa15.45■□□□□ 0.06
IRF3-223ENST00000599223 SLC23A3Q6PIS1 610 aa15.45■□□□□ 0.06
IRF3-223ENST00000599223 UNQ6494/PRO21346Q6UXR6 183 aa15.45■□□□□ 0.06
IRF3-223ENST00000599223 FAM186BQ8IYM0 893 aa15.45■□□□□ 0.06
IRF3-223ENST00000599223 CHPFQ8IZ52 775 aa15.45■□□□□ 0.06
IRF3-223ENST00000599223 EEF2KMTQ96G04 330 aa15.45■□□□□ 0.06
IRF3-223ENST00000599223 CYP3A43Q9HB55 503 aa15.45■□□□□ 0.06
IRF3-223ENST00000599223 CAPN10Q9HC96 672 aa15.45■□□□□ 0.06
IRF3-223ENST00000599223 PNPLA8Q9NP80 782 aa15.45■□□□□ 0.06
IRF3-223ENST00000599223 USP25Q9UHP3 1055 aa15.45■□□□□ 0.06
IRF3-223ENST00000599223 NAGPAQ9UK23 515 aa15.45■□□□□ 0.06
IRF3-223ENST00000599223 CYP8B1Q9UNU6 501 aa15.45■□□□□ 0.06
IRF3-223ENST00000599223 PCDHA5Q9Y5H7 936 aa15.45■□□□□ 0.06
IRF3-223ENST00000599223 FAM208BQ5VWN6 2430 aa15.45■□□□□ 0.06
IRF3-223ENST00000599223 DMXL2Q8TDJ6 3036 aa15.44■□□□□ 0.06
IRF3-223ENST00000599223 WASH3PC4AMC7 463 aa15.44■□□□□ 0.06
IRF3-223ENST00000599223 MYL1P05976 194 aa15.44■□□□□ 0.06
IRF3-223ENST00000599223 PROS1P07225 676 aa15.44■□□□□ 0.06
IRF3-223ENST00000599223 CEACAM1P13688 526 aa15.44■□□□□ 0.06
IRF3-223ENST00000599223 SYKP43405 635 aa15.44■□□□□ 0.06
IRF3-223ENST00000599223 DGKGP49619 791 aa15.44■□□□□ 0.06
IRF3-223ENST00000599223 LMAN2Q12907 356 aa15.44■□□□□ 0.06
IRF3-223ENST00000599223 ZNF394Q53GI3 561 aa15.44■□□□□ 0.06
IRF3-223ENST00000599223 SPDYCQ5MJ68 293 aa15.44■□□□□ 0.06
IRF3-223ENST00000599223 INTS8Q75QN2 995 aaKnown RBP15.44■□□□□ 0.06
IRF3-223ENST00000599223 CCDC186Q7Z3E2 898 aa15.44■□□□□ 0.06
IRF3-223ENST00000599223 SMYD4Q8IYR2 804 aaPredicted RBP15.44■□□□□ 0.06
IRF3-223ENST00000599223 MRGPRX1Q96LB2 322 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms