RNA–Protein interactions for RNA: ENST00000598580.1

GRAMD1A-209, Transcript of GRAM domain containing 1A, human

TSL 3

Gene GRAMD1A, Length 400 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRAMD1A-209	ENST00000598580	SEMA4D	Q92854	862 aa		11.64	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	CAPN10	Q9HC96	672 aa		11.64	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	DNAJC17	Q9NVM6	304 aa	Known RBP	11.64	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	FAM13B	Q9NYF5	915 aa		11.64	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	PLK2	Q9NYY3	685 aa		11.64	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	MARK1	Q9P0L2	795 aa		11.64	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	BCCIP	Q9P287	314 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	FBXO10	Q9UK96	956 aa		11.64	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	CLEC4E	Q9ULY5	219 aa		11.64	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	RAD54B	Q9Y620	910 aa		11.64	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	ANKRD11	Q6UB99	2663 aa	Predicted RBP	11.63	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	ATP8B3	O60423	1300 aa		11.63	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	IKBKB	O14920	756 aa		11.63	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	RARG	P13631	454 aa		11.63	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	NDUFV2	P19404	249 aa		11.63	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	ACO1	P21399	889 aa	Known RBP	11.63	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	CMA1	P23946	247 aa		11.63	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	NTSR1	P30989	418 aa		11.63	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	GCLM	P48507	274 aa		11.63	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	KIF11	P52732	1056 aa		11.63	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	SEMA3B	Q13214	749 aa		11.63	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	LYSMD4	Q5XG99	296 aa		11.63	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	BTBD8	Q5XKL5	378 aa		11.63	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	CEP135	Q66GS9	1140 aa		11.63	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	GRAMD4	Q6IC98	578 aa		11.63	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	KCNV2	Q8TDN2	545 aa		11.63	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	IPO4	Q8TEX9	1081 aa	Known RBP	11.63	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	TAF4B	Q92750	862 aa		11.63	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	GATA6	Q92908	595 aa		11.63	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	BHMT	Q93088	406 aa		11.63	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	CYFIP2	Q96F07	1278 aa		11.63	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	GABRG3	Q99928	467 aa		11.63	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	SCNM1	Q9BWG6	230 aa		11.63	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	BBS2	Q9BXC9	721 aa		11.63	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	TLR8	Q9NR97	1041 aa	Known RBP	11.63	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	CACNA2D2	Q9NY47	1150 aa		11.63	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	ZMIZ1	Q9ULJ6	1067 aa		11.63	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	MAPK8IP1	Q9UQF2	711 aa		11.63	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	TRAF3IP3	Q9Y228	551 aa		11.63	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	TNRC6B	Q9UPQ9	1833 aa	Known RBP	11.63	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	ITPR1	Q14643	2758 aa		11.62	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	CILP	O75339	1184 aa		11.62	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	STC2	O76061	302 aa		11.62	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	FAM200B	P0CF97	657 aa		11.62	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	CD59	P13987	128 aa		11.62	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	HOXB2	P14652	356 aa		11.62	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	ATP5C1	P36542	298 aa	Known RBP	11.62	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	VAMP7	P51809	220 aa		11.62	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	NDUFA8	P51970	172 aa		11.62	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	RPL6	Q02878	288 aa	Known RBP	11.62	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	ZNF33A	Q06730	810 aa		11.62	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	SPDYC	Q5MJ68	293 aa		11.62	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	11.62	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	UNQ6494/PRO21346	Q6UXR6	183 aa		11.62	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	CEP57L1	Q8IYX8	460 aa		11.62	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	KDF1	Q8NAX2	398 aa	Predicted RBP	11.62	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	RBBP8NL	Q8NC74	664 aa	Predicted RBP	11.62	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	NDRG1	Q92597	394 aa	Known RBP	11.62	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	EEF2KMT	Q96G04	330 aa		11.62	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	MRGPRX1	Q96LB2	322 aa		11.62	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	FBXO44	Q9H4M3	255 aa		11.62	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	EXOC1	Q9NV70	894 aa		11.62	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	CYP8B1	Q9UNU6	501 aa		11.62	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	USP3	Q9Y6I4	520 aa		11.62	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	FAM237A	A0A1B0GTK4	181 aa		11.61	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	HYAL3	O43820	417 aa	Predicted RBP	11.61	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	CLSTN1	O94985	981 aa		11.61	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	PENK	P01210	267 aa	Predicted RBP	11.61	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	CFI	P05156	583 aa		11.61	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	SERPINF2	P08697	491 aa		11.61	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	CD58	P19256	250 aa		11.61	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	MAOB	P27338	520 aa		11.61	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	PIK3CA	P42336	1068 aa		11.61	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	DPYD	Q12882	1025 aa		11.61	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	LMAN2	Q12907	356 aa		11.61	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	GEN1	Q17RS7	908 aa		11.61	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	ZCWPW2	Q504Y3	356 aa		11.61	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	FYB2	Q5VWT5	728 aa		11.61	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	ATL3	Q6DD88	541 aa		11.61	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	KLHDC10	Q6PID8	442 aa		11.61	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	BHLHA9	Q7RTU4	235 aa		11.61	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	CHPF	Q8IZ52	775 aa		11.61	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	TRIML1	Q8N9V2	468 aa		11.61	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	ZNF419	Q96HQ0	510 aa	Predicted RBP	11.61	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	SPACA7	Q96KW9	195 aa		11.61	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	CAMK1G	Q96NX5	476 aa		11.61	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	ARID3A	Q99856	593 aa		11.61	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	NUSAP1	Q9BXS6	441 aa	Known RBP	11.61	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	DUSP16	Q9BY84	665 aa		11.61	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	NACA2	Q9H009	215 aa		11.61	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	GOLPH3L	Q9H4A5	285 aa		11.61	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	WDR35	Q9P2L0	1181 aa		11.61	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	KLK13	Q9UKR3	277 aa		11.61	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	SLC6A14	Q9UN76	642 aa		11.61	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	PCDH15	Q96QU1	1955 aa		11.61	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	FASN	P49327	2511 aa	Known RBP	11.6	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	UPK3BL1	B0FP48	263 aa		11.6	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	KCNJ18	B7U540	433 aa		11.6	□□□□□ -0.55
GRAMD1A-209	ENST00000598580	UPK3BL2	E5RIL1	263 aa		11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms