RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 POLR2FP61218 127 aaKnown RBP14.51□□□□□ -0.09
UPF1-205ENST00000598209 COG7P83436 770 aa14.51□□□□□ -0.09
UPF1-205ENST00000598209 LRRC32Q14392 662 aa14.51□□□□□ -0.09
UPF1-205ENST00000598209 DHCR24Q15392 516 aa14.51□□□□□ -0.09
UPF1-205ENST00000598209 ZSCAN23Q3MJ62 389 aa14.51□□□□□ -0.09
UPF1-205ENST00000598209 TMEM196Q5HYL7 178 aa14.51□□□□□ -0.09
UPF1-205ENST00000598209 NAIF1Q69YI7 327 aaPredicted RBP14.51□□□□□ -0.09
UPF1-205ENST00000598209 PASD1Q8IV76 773 aa14.51□□□□□ -0.09
UPF1-205ENST00000598209 RNF139Q8WU17 664 aa14.51□□□□□ -0.09
UPF1-205ENST00000598209 EDEM1Q92611 657 aa14.51□□□□□ -0.09
UPF1-205ENST00000598209 ERGIC2Q96RQ1 377 aa14.51□□□□□ -0.09
UPF1-205ENST00000598209 SLC4A5Q9BY07 1137 aa14.51□□□□□ -0.09
UPF1-205ENST00000598209 CHRDQ9H2X0 955 aa14.51□□□□□ -0.09
UPF1-205ENST00000598209 NLRC4Q9NPP4 1024 aa14.51□□□□□ -0.09
UPF1-205ENST00000598209 ABCC13Q9NSE7 274 aa14.51□□□□□ -0.09
UPF1-205ENST00000598209 RBM12Q9NTZ6 932 aaKnown RBP14.51□□□□□ -0.09
UPF1-205ENST00000598209 SPATA6Q9NWH7 488 aaPredicted RBP14.51□□□□□ -0.09
UPF1-205ENST00000598209 STRIP2Q9ULQ0 834 aa14.51□□□□□ -0.09
UPF1-205ENST00000598209 DAAM1Q9Y4D1 1078 aa14.51□□□□□ -0.09
UPF1-205ENST00000598209 WDFY4Q6ZS81 3184 aa14.51□□□□□ -0.09
UPF1-205ENST00000598209 SLC12A8A0AV02 714 aa14.5□□□□□ -0.09
UPF1-205ENST00000598209 E5RJQ4 531 aa14.5□□□□□ -0.09
UPF1-205ENST00000598209 ADH1CP00326 375 aa14.5□□□□□ -0.09
UPF1-205ENST00000598209 LTFP02788 710 aa14.5□□□□□ -0.09
UPF1-205ENST00000598209 HMBSP08397 361 aa14.5□□□□□ -0.09
UPF1-205ENST00000598209 CYP11B1P15538 503 aa14.5□□□□□ -0.09
UPF1-205ENST00000598209 GALK1P51570 392 aa14.5□□□□□ -0.09
UPF1-205ENST00000598209 GRSF1Q12849 480 aaKnown RBP eCLIP14.5□□□□□ -0.09
UPF1-205ENST00000598209 PDCLQ13371 301 aa14.5□□□□□ -0.09
UPF1-205ENST00000598209 ANGPT1Q15389 498 aa14.5□□□□□ -0.09
UPF1-205ENST00000598209 GAB4Q2WGN9 574 aa14.5□□□□□ -0.09
UPF1-205ENST00000598209 DGKKQ5KSL6 1271 aa14.5□□□□□ -0.09
UPF1-205ENST00000598209 LY6G5CQ5SRR4 150 aa14.5□□□□□ -0.09
UPF1-205ENST00000598209 FSTL4Q6MZW2 842 aa14.5□□□□□ -0.09
UPF1-205ENST00000598209 RHBDF2Q6PJF5 856 aa14.5□□□□□ -0.09
UPF1-205ENST00000598209 TMEM110Q86TL2 294 aa14.5□□□□□ -0.09
UPF1-205ENST00000598209 C1orf210Q8IVY1 113 aa14.5□□□□□ -0.09
UPF1-205ENST00000598209 SCUBE3Q8IX30 993 aa14.5□□□□□ -0.09
UPF1-205ENST00000598209 WDTC1Q8N5D0 677 aa14.5□□□□□ -0.09
UPF1-205ENST00000598209 NEK11Q8NG66 645 aa14.5□□□□□ -0.09
UPF1-205ENST00000598209 GOLGA1Q92805 767 aa14.5□□□□□ -0.09
UPF1-205ENST00000598209 CD101Q93033 1021 aa14.5□□□□□ -0.09
UPF1-205ENST00000598209 EXOC4Q96A65 974 aa14.5□□□□□ -0.09
UPF1-205ENST00000598209 P2RY13Q9BPV8 354 aa14.5□□□□□ -0.09
UPF1-205ENST00000598209 LHX5Q9H2C1 402 aa14.5□□□□□ -0.09
UPF1-205ENST00000598209 CBX8Q9HC52 389 aa14.5□□□□□ -0.09
UPF1-205ENST00000598209 FBRSL1Q9HCM7 1045 aaKnown RBP14.5□□□□□ -0.09
UPF1-205ENST00000598209 PAPSS1O43252 624 aaPredicted RBP14.49□□□□□ -0.09
UPF1-205ENST00000598209 SART1O43290 800 aaKnown RBP14.49□□□□□ -0.09
UPF1-205ENST00000598209 ADH5P11766 374 aa14.49□□□□□ -0.09
UPF1-205ENST00000598209 OPRD1P41143 372 aa14.49□□□□□ -0.09
UPF1-205ENST00000598209 JAM2P57087 298 aa14.49□□□□□ -0.09
UPF1-205ENST00000598209 MTAPQ13126 283 aa14.49□□□□□ -0.09
UPF1-205ENST00000598209 CCINQ13939 588 aa14.49□□□□□ -0.09
UPF1-205ENST00000598209 MSANTD2Q6P1R3 559 aa14.49□□□□□ -0.09
UPF1-205ENST00000598209 Q6ZNB5 142 aa14.49□□□□□ -0.09
UPF1-205ENST00000598209 LUZP1Q86V48 1076 aa14.49□□□□□ -0.09
UPF1-205ENST00000598209 FMNL3Q8IVF7 1028 aa14.49□□□□□ -0.09
UPF1-205ENST00000598209 C1orf131Q8NDD1 294 aaKnown RBP14.49□□□□□ -0.09
UPF1-205ENST00000598209 FAM149B1Q96BN6 582 aa14.49□□□□□ -0.09
UPF1-205ENST00000598209 NOX5Q96PH1 765 aa14.49□□□□□ -0.09
UPF1-205ENST00000598209 SPAG5Q96R06 1193 aa14.49□□□□□ -0.09
UPF1-205ENST00000598209 CPXM1Q96SM3 734 aa14.49□□□□□ -0.09
UPF1-205ENST00000598209 IER2Q9BTL4 223 aa14.49□□□□□ -0.09
UPF1-205ENST00000598209 IRF2BPLQ9H1B7 796 aa14.49□□□□□ -0.09
UPF1-205ENST00000598209 PDCL3Q9H2J4 239 aa14.49□□□□□ -0.09
UPF1-205ENST00000598209 RTN4Q9NQC3 1192 aaKnown RBP14.49□□□□□ -0.09
UPF1-205ENST00000598209 SPHK2Q9NRA0 654 aa14.49□□□□□ -0.09
UPF1-205ENST00000598209 TJP2Q9UDY2 1190 aa14.49□□□□□ -0.09
UPF1-205ENST00000598209 SFMBT1Q9UHJ3 866 aa14.49□□□□□ -0.09
UPF1-205ENST00000598209 CEP83Q9Y592 693 aa14.49□□□□□ -0.09
UPF1-205ENST00000598209 FANCMQ8IYD8 2048 aa14.49□□□□□ -0.09
UPF1-205ENST00000598209 TEX33O43247 280 aa14.48□□□□□ -0.09
UPF1-205ENST00000598209 LAMTOR5O43504 91 aa14.48□□□□□ -0.09
UPF1-205ENST00000598209 GFPT2O94808 682 aa14.48□□□□□ -0.09
UPF1-205ENST00000598209 EGFP01133 1207 aa14.48□□□□□ -0.09
UPF1-205ENST00000598209 KLKB1P03952 638 aa14.48□□□□□ -0.09
UPF1-205ENST00000598209 DRD1P21728 446 aa14.48□□□□□ -0.09
UPF1-205ENST00000598209 CORO1AP31146 461 aaKnown RBP14.48□□□□□ -0.09
UPF1-205ENST00000598209 SOX5P35711 763 aa14.48□□□□□ -0.09
UPF1-205ENST00000598209 NHLH1Q02575 133 aa14.48□□□□□ -0.09
UPF1-205ENST00000598209 GAD2Q05329 585 aa14.48□□□□□ -0.09
UPF1-205ENST00000598209 GAS6Q14393 721 aa14.48□□□□□ -0.09
UPF1-205ENST00000598209 FILIP1LQ4L180 1135 aa14.48□□□□□ -0.09
UPF1-205ENST00000598209 TAF3Q5VWG9 929 aa14.48□□□□□ -0.09
UPF1-205ENST00000598209 Q6ZS52 159 aa14.48□□□□□ -0.09
UPF1-205ENST00000598209 NOP9Q86U38 636 aaKnown RBP14.48□□□□□ -0.09
UPF1-205ENST00000598209 C12orf40Q86WS4 652 aa14.48□□□□□ -0.09
UPF1-205ENST00000598209 TMEM25Q86YD3 366 aa14.48□□□□□ -0.09
UPF1-205ENST00000598209 SYNPOQ8N3V7 929 aa14.48□□□□□ -0.09
UPF1-205ENST00000598209 EPS8L1Q8TE68 723 aa14.48□□□□□ -0.09
UPF1-205ENST00000598209 DDX1Q92499 740 aaKnown RBP14.48□□□□□ -0.09
UPF1-205ENST00000598209 PLD4Q96BZ4 506 aa14.48□□□□□ -0.09
UPF1-205ENST00000598209 PPP1R13BQ96KQ4 1090 aa14.48□□□□□ -0.09
UPF1-205ENST00000598209 DCLK3Q9C098 648 aa14.48□□□□□ -0.09
UPF1-205ENST00000598209 ZNF510Q9Y2H8 683 aa14.48□□□□□ -0.09
UPF1-205ENST00000598209 HBS1LQ9Y450 684 aaKnown RBP14.48□□□□□ -0.09
UPF1-205ENST00000598209 CACNA1HO95180 2353 aa14.48□□□□□ -0.09
UPF1-205ENST00000598209 MYO18AQ92614 2054 aaKnown RBP14.47□□□□□ -0.09
UPF1-205ENST00000598209 HOXC11O43248 304 aaPredicted RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms