RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 SMYD2Q9NRG4 433 aa16.09■□□□□ 0.17
IRF3-219ENST00000597636 RBAKQ9NYW8 714 aaPredicted RBP16.09■□□□□ 0.17
IRF3-219ENST00000597636 H3BNX3 289 aa16.08■□□□□ 0.16
IRF3-219ENST00000597636 PFDN1O60925 122 aa16.08■□□□□ 0.16
IRF3-219ENST00000597636 L1CAMP32004 1257 aa16.08■□□□□ 0.16
IRF3-219ENST00000597636 HPCAP84074 193 aa16.08■□□□□ 0.16
IRF3-219ENST00000597636 SNAPC2Q13487 334 aa16.08■□□□□ 0.16
IRF3-219ENST00000597636 DARS2Q6PI48 645 aaKnown RBP16.08■□□□□ 0.16
IRF3-219ENST00000597636 SAMD7Q7Z3H4 446 aa16.08■□□□□ 0.16
IRF3-219ENST00000597636 KCTD6Q8NC69 237 aa16.08■□□□□ 0.16
IRF3-219ENST00000597636 ZNF778Q96MU6 729 aa16.08■□□□□ 0.16
IRF3-219ENST00000597636 GCNAQ96QF7 691 aa16.08■□□□□ 0.16
IRF3-219ENST00000597636 PLAC1Q9HBJ0 212 aa16.08■□□□□ 0.16
IRF3-219ENST00000597636 USP29Q9HBJ7 922 aa16.08■□□□□ 0.16
IRF3-219ENST00000597636 POPDC2Q9HBU9 364 aa16.08■□□□□ 0.16
IRF3-219ENST00000597636 DENRO43583 198 aaKnown RBP16.08■□□□□ 0.16
IRF3-219ENST00000597636 SIN3BO75182 1162 aa16.08■□□□□ 0.16
IRF3-219ENST00000597636 KRT76Q01546 638 aa16.08■□□□□ 0.16
IRF3-219ENST00000597636 ROR1Q01973 937 aa16.08■□□□□ 0.16
IRF3-219ENST00000597636 OGFRL1Q5TC84 451 aaPredicted RBP16.08■□□□□ 0.16
IRF3-219ENST00000597636 KLHDC10Q6PID8 442 aa16.08■□□□□ 0.16
IRF3-219ENST00000597636 KBTBD6Q86V97 674 aa16.08■□□□□ 0.16
IRF3-219ENST00000597636 OR5B17Q8NGF7 314 aa16.08■□□□□ 0.16
IRF3-219ENST00000597636 JOSD2Q8TAC2 188 aa16.08■□□□□ 0.16
IRF3-219ENST00000597636 PPP1R14CQ8TAE6 165 aa16.08■□□□□ 0.16
IRF3-219ENST00000597636 MIPOL1Q8TD10 442 aa16.08■□□□□ 0.16
IRF3-219ENST00000597636 SGIP1Q9BQI5 828 aa16.08■□□□□ 0.16
IRF3-219ENST00000597636 TMEM39BQ9GZU3 492 aa16.08■□□□□ 0.16
IRF3-219ENST00000597636 CYP4F11Q9HBI6 524 aa16.08■□□□□ 0.16
IRF3-219ENST00000597636 DNAJC16Q9Y2G8 782 aa16.08■□□□□ 0.16
IRF3-219ENST00000597636 INPP5FQ9Y2H2 1132 aa16.08■□□□□ 0.16
IRF3-219ENST00000597636 DTNAQ9Y4J8 743 aa16.08■□□□□ 0.16
IRF3-219ENST00000597636 STYXL1Q9Y6J8 313 aa16.08■□□□□ 0.16
IRF3-219ENST00000597636 RPS6KL1Q9Y6S9 549 aa16.08■□□□□ 0.16
IRF3-219ENST00000597636 SF3B1O75533 1304 aaKnown RBP eCLIP16.08■□□□□ 0.163e-7■■■■■ 55.1
IRF3-219ENST00000597636 CAPN8A6NHC0 703 aa16.07■□□□□ 0.16
IRF3-219ENST00000597636 TOM1L1O75674 476 aa16.07■□□□□ 0.16
IRF3-219ENST00000597636 CCDC166P0CW27 439 aa16.07■□□□□ 0.16
IRF3-219ENST00000597636 KRT3P12035 628 aa16.07■□□□□ 0.16
IRF3-219ENST00000597636 EIF4BP23588 611 aaKnown RBP16.07■□□□□ 0.16
IRF3-219ENST00000597636 PRAMEF18Q5VWM3 479 aa16.07■□□□□ 0.16
IRF3-219ENST00000597636 SCARA3Q6AZY7 606 aa16.07■□□□□ 0.16
IRF3-219ENST00000597636 KLC3Q6P597 504 aa16.07■□□□□ 0.16
IRF3-219ENST00000597636 C1orf228Q6PIY5 440 aa16.07■□□□□ 0.16
IRF3-219ENST00000597636 HPS6Q86YV9 775 aa16.07■□□□□ 0.16
IRF3-219ENST00000597636 CLEC4DQ8WXI8 215 aa16.07■□□□□ 0.16
IRF3-219ENST00000597636 XPNPEP1Q9NQW7 623 aa16.07■□□□□ 0.16
IRF3-219ENST00000597636 RAB6BQ9NRW1 208 aa16.07■□□□□ 0.16
IRF3-219ENST00000597636 FEM1BQ9UK73 627 aa16.07■□□□□ 0.16
IRF3-219ENST00000597636 ICAM1P05362 532 aa16.07■□□□□ 0.16
IRF3-219ENST00000597636 CDH5P33151 784 aaPredicted RBP16.07■□□□□ 0.16
IRF3-219ENST00000597636 ZNF394Q53GI3 561 aa16.07■□□□□ 0.16
IRF3-219ENST00000597636 ADGRF2Q8IZF7 708 aa16.07■□□□□ 0.16
IRF3-219ENST00000597636 MCPH1Q8NEM0 835 aa16.07■□□□□ 0.16
IRF3-219ENST00000597636 CMASQ8NFW8 434 aaPredicted RBP16.07■□□□□ 0.16
IRF3-219ENST00000597636 MMP19Q99542 508 aa16.07■□□□□ 0.16
IRF3-219ENST00000597636 CGRRF1Q99675 332 aa16.07■□□□□ 0.16
IRF3-219ENST00000597636 FRMD8Q9BZ67 464 aaPredicted RBP16.07■□□□□ 0.16
IRF3-219ENST00000597636 HAPLN2Q9GZV7 340 aa16.07■□□□□ 0.16
IRF3-219ENST00000597636 PDLIM7Q9NR12 457 aa16.07■□□□□ 0.16
IRF3-219ENST00000597636 HMX2A2RU54 273 aa16.06■□□□□ 0.16
IRF3-219ENST00000597636 ITM2AO43736 263 aa16.06■□□□□ 0.16
IRF3-219ENST00000597636 STRNO43815 780 aa16.06■□□□□ 0.16
IRF3-219ENST00000597636 LYPLA1O75608 230 aaPredicted RBP16.06■□□□□ 0.16
IRF3-219ENST00000597636 CSH1P0DML2 217 aa16.06■□□□□ 0.16
IRF3-219ENST00000597636 CSH2P0DML3 217 aa16.06■□□□□ 0.16
IRF3-219ENST00000597636 EIF2AK2P19525 551 aaKnown RBP16.06■□□□□ 0.16
IRF3-219ENST00000597636 ALDH1A3P47895 512 aa16.06■□□□□ 0.16
IRF3-219ENST00000597636 NADK2Q4G0N4 442 aa16.06■□□□□ 0.16
IRF3-219ENST00000597636 FASTKD1Q53R41 847 aaKnown RBP16.06■□□□□ 0.16
IRF3-219ENST00000597636 TCHHL1Q5QJ38 904 aaPredicted RBP16.06■□□□□ 0.16
IRF3-219ENST00000597636 ZBTB41Q5SVQ8 909 aa16.06■□□□□ 0.16
IRF3-219ENST00000597636 TEDDM1Q5T9Z0 273 aa16.06■□□□□ 0.16
IRF3-219ENST00000597636 OLFML2BQ68BL8 750 aa16.06■□□□□ 0.16
IRF3-219ENST00000597636 DEFB107AQ8IZN7 70 aa16.06■□□□□ 0.16
IRF3-219ENST00000597636 FBXW8Q8N3Y1 598 aa16.06■□□□□ 0.16
IRF3-219ENST00000597636 IRGQQ8WZA9 623 aa16.06■□□□□ 0.16
IRF3-219ENST00000597636 PLEKHG4BQ96PX9 1271 aa16.06■□□□□ 0.16
IRF3-219ENST00000597636 NRDE2Q9H7Z3 1164 aa16.06■□□□□ 0.16
IRF3-219ENST00000597636 PCSK1NQ9UHG2 260 aa16.06■□□□□ 0.16
IRF3-219ENST00000597636 HERC5Q9UII4 1024 aaKnown RBP16.06■□□□□ 0.16
IRF3-219ENST00000597636 SERPINA10Q9UK55 444 aa16.06■□□□□ 0.16
IRF3-219ENST00000597636 FZD1Q9UP38 647 aa16.06■□□□□ 0.16
IRF3-219ENST00000597636 LZTS1Q9Y250 596 aa16.06■□□□□ 0.16
IRF3-219ENST00000597636 H0YCG3 227 aa16.06■□□□□ 0.16
IRF3-219ENST00000597636 APOEP02649 317 aa16.06■□□□□ 0.16
IRF3-219ENST00000597636 ITGAXP20702 1163 aa16.06■□□□□ 0.16
IRF3-219ENST00000597636 PMLP29590 882 aa16.06■□□□□ 0.16
IRF3-219ENST00000597636 DBN1Q16643 649 aa16.06■□□□□ 0.16
IRF3-219ENST00000597636 MROH9Q5TGP6 573 aa16.06■□□□□ 0.16
IRF3-219ENST00000597636 NPNTQ6UXI9 565 aa16.06■□□□□ 0.16
IRF3-219ENST00000597636 METTL25Q8N6Q8 603 aa16.06■□□□□ 0.16
IRF3-219ENST00000597636 CMTM5Q96DZ9 223 aa16.06■□□□□ 0.16
IRF3-219ENST00000597636 ZBTB45Q96K62 511 aaPredicted RBP16.06■□□□□ 0.16
IRF3-219ENST00000597636 CALN1Q9BXU9 219 aa16.06■□□□□ 0.16
IRF3-219ENST00000597636 SHCBP1LQ9BZQ2 653 aa16.06■□□□□ 0.16
IRF3-219ENST00000597636 IMPG2Q9BZV3 1241 aa16.06■□□□□ 0.16
IRF3-219ENST00000597636 RBM38Q9H0Z9 239 aaKnown RBP16.06■□□□□ 0.16
IRF3-219ENST00000597636 DHX33Q9H6R0 707 aaKnown RBP16.06■□□□□ 0.16
IRF3-219ENST00000597636 UBAP1Q9NZ09 502 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms