RNA–Protein interactions for RNA: ENST00000597400.5

ZNF548-207, Transcript of zinc finger protein 548, humanhuman

TSL 3 BASIC

Gene ZNF548, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-207ENST00000597400 TUBP50607 506 aa11.55□□□□□ -0.56
ZNF548-207ENST00000597400 COPAP53621 1224 aa11.55□□□□□ -0.56
ZNF548-207ENST00000597400 SDE2Q6IQ49 451 aa11.55□□□□□ -0.56
ZNF548-207ENST00000597400 DHRS13Q6UX07 377 aa11.55□□□□□ -0.56
ZNF548-207ENST00000597400 HTR3DQ70Z44 454 aa11.55□□□□□ -0.56
ZNF548-207ENST00000597400 METTL3Q86U44 580 aaKnown RBP11.55□□□□□ -0.56
ZNF548-207ENST00000597400 FAM35AQ86V20 835 aa11.55□□□□□ -0.56
ZNF548-207ENST00000597400 ZNF843Q8N446 348 aa11.55□□□□□ -0.56
ZNF548-207ENST00000597400 B3GALNT2Q8NCR0 500 aa11.55□□□□□ -0.56
ZNF548-207ENST00000597400 PDZD8Q8NEN9 1154 aa11.55□□□□□ -0.56
ZNF548-207ENST00000597400 ZMIZ2Q8NF64 920 aa11.55□□□□□ -0.56
ZNF548-207ENST00000597400 CADM4Q8NFZ8 388 aa11.55□□□□□ -0.56
ZNF548-207ENST00000597400 OR6B3Q8NGW1 331 aa11.55□□□□□ -0.56
ZNF548-207ENST00000597400 RASSF8Q8NHQ8 419 aa11.55□□□□□ -0.56
ZNF548-207ENST00000597400 SCFD1Q8WVM8 642 aa11.55□□□□□ -0.56
ZNF548-207ENST00000597400 ELMO3Q96BJ8 720 aa11.55□□□□□ -0.56
ZNF548-207ENST00000597400 ZSCAN31Q96LW9 406 aaPredicted RBP11.55□□□□□ -0.56
ZNF548-207ENST00000597400 GZF1Q9H116 711 aaPredicted RBP11.55□□□□□ -0.56
ZNF548-207ENST00000597400 ITM2CQ9NQX7 267 aa11.55□□□□□ -0.56
ZNF548-207ENST00000597400 OLFML3Q9NRN5 406 aa11.55□□□□□ -0.56
ZNF548-207ENST00000597400 OSER1Q9NX31 292 aa11.55□□□□□ -0.56
ZNF548-207ENST00000597400 PCDHGB2Q9Y5G2 931 aa11.55□□□□□ -0.56
ZNF548-207ENST00000597400 SNX11Q9Y5W9 270 aa11.55□□□□□ -0.56
ZNF548-207ENST00000597400 COL6A6A6NMZ7 2263 aa11.55□□□□□ -0.56
ZNF548-207ENST00000597400 BOD1L1Q8NFC6 3051 aa11.54□□□□□ -0.56
ZNF548-207ENST00000597400 FRMD3A2A2Y4 597 aa11.54□□□□□ -0.56
ZNF548-207ENST00000597400 METTL12A8MUP2 240 aa11.54□□□□□ -0.56
ZNF548-207ENST00000597400 KCNK3O14649 394 aa11.54□□□□□ -0.56
ZNF548-207ENST00000597400 TLR5O60602 858 aa11.54□□□□□ -0.56
ZNF548-207ENST00000597400 BEST1O76090 585 aa11.54□□□□□ -0.56
ZNF548-207ENST00000597400 RTN3O95197 1032 aaPredicted RBP11.54□□□□□ -0.56
ZNF548-207ENST00000597400 TNNC2P02585 160 aa11.54□□□□□ -0.56
ZNF548-207ENST00000597400 HOXD13P35453 343 aa11.54□□□□□ -0.56
ZNF548-207ENST00000597400 LONP1P36776 959 aaKnown RBP11.54□□□□□ -0.56
ZNF548-207ENST00000597400 DGKGP49619 791 aa11.54□□□□□ -0.56
ZNF548-207ENST00000597400 ENPP2Q13822 863 aa11.54□□□□□ -0.56
ZNF548-207ENST00000597400 GEN1Q17RS7 908 aa11.54□□□□□ -0.56
ZNF548-207ENST00000597400 KIF19Q2TAC6 998 aa11.54□□□□□ -0.56
ZNF548-207ENST00000597400 PREPLQ4J6C6 727 aaPredicted RBP11.54□□□□□ -0.56
ZNF548-207ENST00000597400 CCDC157Q569K6 752 aa11.54□□□□□ -0.56
ZNF548-207ENST00000597400 KCNT1Q5JUK3 1230 aa11.54□□□□□ -0.56
ZNF548-207ENST00000597400 NUDT18Q6ZVK8 323 aa11.54□□□□□ -0.56
ZNF548-207ENST00000597400 TRAPPC11Q7Z392 1133 aa11.54□□□□□ -0.56
ZNF548-207ENST00000597400 GALNT15Q8N3T1 639 aa11.54□□□□□ -0.56
ZNF548-207ENST00000597400 PDCD7Q8N8D1 485 aaKnown RBP11.54□□□□□ -0.56
ZNF548-207ENST00000597400 CDC6Q99741 560 aa11.54□□□□□ -0.56
ZNF548-207ENST00000597400 KLF16Q9BXK1 252 aaPredicted RBP11.54□□□□□ -0.56
ZNF548-207ENST00000597400 SNX25Q9H3E2 840 aa11.54□□□□□ -0.56
ZNF548-207ENST00000597400 SEL1LQ9UBV2 794 aa11.54□□□□□ -0.56
ZNF548-207ENST00000597400 EXOC7Q9UPT5 735 aa11.54□□□□□ -0.56
ZNF548-207ENST00000597400 TK2O00142 265 aa11.53□□□□□ -0.56
ZNF548-207ENST00000597400 CBX4O00257 560 aa11.53□□□□□ -0.56
ZNF548-207ENST00000597400 GFRA2O00451 464 aa11.53□□□□□ -0.56
ZNF548-207ENST00000597400 MDM4O15151 490 aa11.53□□□□□ -0.56
ZNF548-207ENST00000597400 ZBTB24O43167 697 aaPredicted RBP11.53□□□□□ -0.56
ZNF548-207ENST00000597400 IGLV3-19P01714 112 aa11.53□□□□□ -0.56
ZNF548-207ENST00000597400 ACO1P21399 889 aaKnown RBP11.53□□□□□ -0.56
ZNF548-207ENST00000597400 PRKCHP24723 683 aa11.53□□□□□ -0.56
ZNF548-207ENST00000597400 EIF2S3P41091 472 aaKnown RBP11.53□□□□□ -0.56
ZNF548-207ENST00000597400 IL9RQ01113 521 aa11.53□□□□□ -0.56
ZNF548-207ENST00000597400 DUOXA2Q1HG44 320 aa11.53□□□□□ -0.56
ZNF548-207ENST00000597400 LARP1BQ659C4 914 aaKnown RBP11.53□□□□□ -0.56
ZNF548-207ENST00000597400 Q6ZNB5 142 aa11.53□□□□□ -0.56
ZNF548-207ENST00000597400 GPRIN1Q7Z2K8 1008 aa11.53□□□□□ -0.56
ZNF548-207ENST00000597400 WDR49Q8IV35 697 aa11.53□□□□□ -0.56
ZNF548-207ENST00000597400 SYCP3Q8IZU3 236 aa11.53□□□□□ -0.56
ZNF548-207ENST00000597400 RBBP8NLQ8NC74 664 aaPredicted RBP11.53□□□□□ -0.56
ZNF548-207ENST00000597400 HPS3Q969F9 1004 aa11.53□□□□□ -0.56
ZNF548-207ENST00000597400 XPO6Q96QU8 1125 aaKnown RBP11.53□□□□□ -0.56
ZNF548-207ENST00000597400 SMOQ99835 787 aa11.53□□□□□ -0.56
ZNF548-207ENST00000597400 XYLT2Q9H1B5 865 aa11.53□□□□□ -0.56
ZNF548-207ENST00000597400 C6orf106Q9H6K1 298 aaPredicted RBP11.53□□□□□ -0.56
ZNF548-207ENST00000597400 SMYD3Q9H7B4 428 aa11.53□□□□□ -0.56
ZNF548-207ENST00000597400 FBXO10Q9UK96 956 aa11.53□□□□□ -0.56
ZNF548-207ENST00000597400 ARID1BQ8NFD5 2236 aaPredicted RBP11.53□□□□□ -0.56
ZNF548-207ENST00000597400 DOCK9Q9BZ29 2069 aa11.52□□□□□ -0.57
ZNF548-207ENST00000597400 A0A087X0B3 334 aa11.52□□□□□ -0.57
ZNF548-207ENST00000597400 A8MXQ7 604 aa11.52□□□□□ -0.57
ZNF548-207ENST00000597400 H0Y8X5 98 aa11.52□□□□□ -0.57
ZNF548-207ENST00000597400 TNFSF14O43557 240 aa11.52□□□□□ -0.57
ZNF548-207ENST00000597400 GAP43P17677 238 aa11.52□□□□□ -0.57
ZNF548-207ENST00000597400 MFAP3P55082 362 aa11.52□□□□□ -0.57
ZNF548-207ENST00000597400 CDH8P55286 799 aa11.52□□□□□ -0.57
ZNF548-207ENST00000597400 WDR72Q3MJ13 1102 aa11.52□□□□□ -0.57
ZNF548-207ENST00000597400 IL27RAQ6UWB1 636 aa11.52□□□□□ -0.57
ZNF548-207ENST00000597400 FAM124AQ86V42 546 aa11.52□□□□□ -0.57
ZNF548-207ENST00000597400 TMPRSS6Q8IU80 811 aa11.52□□□□□ -0.57
ZNF548-207ENST00000597400 FUKQ8N0W3 1084 aa11.52□□□□□ -0.57
ZNF548-207ENST00000597400 ZNF516Q92618 1163 aa11.52□□□□□ -0.57
ZNF548-207ENST00000597400 FCRL3Q96P31 734 aaPredicted RBP11.52□□□□□ -0.57
ZNF548-207ENST00000597400 SDCBP2Q9H190 292 aa11.52□□□□□ -0.57
ZNF548-207ENST00000597400 NMUR1Q9HB89 426 aa11.52□□□□□ -0.57
ZNF548-207ENST00000597400 DMAP1Q9NPF5 467 aaPredicted RBP11.52□□□□□ -0.57
ZNF548-207ENST00000597400 KRT82Q9NSB4 513 aa11.52□□□□□ -0.57
ZNF548-207ENST00000597400 HSPBP1Q9NZL4 362 aa11.52□□□□□ -0.57
ZNF548-207ENST00000597400 THAP10Q9P2Z0 257 aaPredicted RBP11.52□□□□□ -0.57
ZNF548-207ENST00000597400 NUDT5Q9UKK9 219 aa11.52□□□□□ -0.57
ZNF548-207ENST00000597400 CLEC4EQ9ULY5 219 aa11.52□□□□□ -0.57
ZNF548-207ENST00000597400 ZNF233A6NK53 670 aa11.51□□□□□ -0.57
ZNF548-207ENST00000597400 CYP26A1O43174 497 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms