RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 RCCD1A6NED2 376 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 SOBPA7XYQ1 873 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 E5RJQ4 531 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 TNFRSF10AO00220 468 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 MDM4O15151 490 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 ECI2O75521 394 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 H2AFZP0C0S5 128 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 RARGP13631 454 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 GALCP54803 685 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 DAOAP59103 153 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 C1QBPQ07021 282 aaKnown RBP15.7■□□□□ 0.1
TRIM28-207ENST00000597136 PTP4A2Q12974 167 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 PTPN20Q4JDL3 420 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 HECTD3Q5T447 861 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 IER5LQ5T953 404 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 MMS22LQ6ZRQ5 1243 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 H2AFVQ71UI9 128 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 TMEM110Q86TL2 294 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 ERICH1Q86X53 443 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 MCOLN2Q8IZK6 566 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 SIX6OS1Q8N1H7 587 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 WBP2Q969T9 261 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 NXPE3Q969Y0 559 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 VCPIP1Q96JH7 1222 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 EPHX3Q9H6B9 360 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 LUC7LQ9NQ29 371 aaKnown RBP15.7■□□□□ 0.1
TRIM28-207ENST00000597136 GKN1Q9NS71 199 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.7■□□□□ 0.1
TRIM28-207ENST00000597136 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.7■□□□□ 0.1
TRIM28-207ENST00000597136 ADAM22Q9P0K1 906 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 INTUQ9ULD6 942 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 SORCS3Q9UPU3 1222 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 ZKSCAN5Q9Y2L8 839 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 ANKRD62A6NC57 917 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 PAPSS1O43252 624 aaPredicted RBP15.7■□□□□ 0.1
TRIM28-207ENST00000597136 TLR5O60602 858 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 OLFM2O95897 454 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 VAV2P52735 878 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 YWHAGP61981 247 aaKnown RBP eCLIP15.7■□□□□ 0.1
TRIM28-207ENST00000597136 C2CD6Q53TS8 623 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 KIAA1328Q86T90 577 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 MFSD6LQ8IWD5 586 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 KIAA1524Q8TCG1 905 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 EDEM1Q92611 657 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 ZFYVE19Q96K21 471 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 CYLDQ9NQC7 956 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 CNGB3Q9NQW8 809 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 SMPD4Q9NXE4 827 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 TFR2Q9UP52 801 aa15.7■□□□□ 0.1
TRIM28-207ENST00000597136 A0A0U1RQJ8 604 aa15.69■□□□□ 0.1
TRIM28-207ENST00000597136 DLL1O00548 723 aa15.69■□□□□ 0.1
TRIM28-207ENST00000597136 SCAMP3O14828 347 aaKnown RBP15.69■□□□□ 0.1
TRIM28-207ENST00000597136 MBL2P11226 248 aaPredicted RBP15.69■□□□□ 0.1
TRIM28-207ENST00000597136 ABCB4P21439 1286 aa15.69■□□□□ 0.1
TRIM28-207ENST00000597136 GABRB2P47870 512 aa15.69■□□□□ 0.1
TRIM28-207ENST00000597136 ZXDAP98168 799 aa15.69■□□□□ 0.1
TRIM28-207ENST00000597136 TAF5Q15542 800 aa15.69■□□□□ 0.1
TRIM28-207ENST00000597136 BSPRYQ5W0U4 402 aa15.69■□□□□ 0.1
TRIM28-207ENST00000597136 CELF5Q8N6W0 485 aaKnown RBP15.69■□□□□ 0.1
TRIM28-207ENST00000597136 MSANTD4Q8NCY6 345 aa15.69■□□□□ 0.1
TRIM28-207ENST00000597136 ATRIPQ8WXE1 791 aa15.69■□□□□ 0.1
TRIM28-207ENST00000597136 C18orf8Q96DM3 657 aa15.69■□□□□ 0.1
TRIM28-207ENST00000597136 PIWIL1Q96J94 861 aaKnown RBP15.69■□□□□ 0.1
TRIM28-207ENST00000597136 ZFRQ96KR1 1074 aaKnown RBP15.69■□□□□ 0.1
TRIM28-207ENST00000597136 C11orf70Q9BRQ4 267 aa15.69■□□□□ 0.1
TRIM28-207ENST00000597136 LACRTQ9GZZ8 138 aa15.69■□□□□ 0.1
TRIM28-207ENST00000597136 THAP2Q9H0W7 228 aa15.69■□□□□ 0.1
TRIM28-207ENST00000597136 CPQQ9Y646 472 aa15.69■□□□□ 0.1
TRIM28-207ENST00000597136 DPYSL4O14531 572 aa15.68■□□□□ 0.1
TRIM28-207ENST00000597136 PJA2O43164 708 aa15.68■□□□□ 0.1
TRIM28-207ENST00000597136 DCXO43602 365 aa15.68■□□□□ 0.1
TRIM28-207ENST00000597136 ERBB2P04626 1255 aa15.68■□□□□ 0.1
TRIM28-207ENST00000597136 CALB1P05937 261 aa15.68■□□□□ 0.1
TRIM28-207ENST00000597136 FYNP06241 537 aa15.68■□□□□ 0.1
TRIM28-207ENST00000597136 TMEM253P0C7T8 217 aa15.68■□□□□ 0.1
TRIM28-207ENST00000597136 MYBL1P10243 752 aa15.68■□□□□ 0.1
TRIM28-207ENST00000597136 PSMC3P17980 439 aa15.68■□□□□ 0.1
TRIM28-207ENST00000597136 GDI1P31150 447 aa15.68■□□□□ 0.1
TRIM28-207ENST00000597136 ACADSBP45954 432 aa15.68■□□□□ 0.1
TRIM28-207ENST00000597136 SLC7A9P82251 487 aa15.68■□□□□ 0.1
TRIM28-207ENST00000597136 SCML4Q8N228 414 aa15.68■□□□□ 0.1
TRIM28-207ENST00000597136 SH3RF2Q8TEC5 729 aa15.68■□□□□ 0.1
TRIM28-207ENST00000597136 CTNNBL1Q8WYA6 563 aaPredicted RBP15.68■□□□□ 0.1
TRIM28-207ENST00000597136 TRIM11Q96F44 468 aa15.68■□□□□ 0.1
TRIM28-207ENST00000597136 ASIC4Q96FT7 647 aa15.68■□□□□ 0.1
TRIM28-207ENST00000597136 SYNCQ9H7C4 482 aa15.68■□□□□ 0.1
TRIM28-207ENST00000597136 ZMYM5Q9UJ78 669 aa15.68■□□□□ 0.1
TRIM28-207ENST00000597136 CACNA1IQ9P0X4 2223 aa15.68■□□□□ 0.1
TRIM28-207ENST00000597136 PI4K2BG5E9Z4 385 aa15.67■□□□□ 0.1
TRIM28-207ENST00000597136 LEFTY2O00292 366 aa15.67■□□□□ 0.1
TRIM28-207ENST00000597136 ZSCAN12O43309 604 aa15.67■□□□□ 0.1
TRIM28-207ENST00000597136 CYP1A2P05177 515 aa15.67■□□□□ 0.1
TRIM28-207ENST00000597136 ATP5C1P36542 298 aaKnown RBP15.67■□□□□ 0.1
TRIM28-207ENST00000597136 TUBP50607 506 aa15.67■□□□□ 0.1
TRIM28-207ENST00000597136 SNX16P57768 344 aa15.67■□□□□ 0.1
TRIM28-207ENST00000597136 ZNF268Q14587 947 aaPredicted RBP15.67■□□□□ 0.1
TRIM28-207ENST00000597136 C10orf120Q5SQS8 335 aa15.67■□□□□ 0.1
TRIM28-207ENST00000597136 BTBD8Q5XKL5 378 aa15.67■□□□□ 0.1
TRIM28-207ENST00000597136 XYLT1Q86Y38 959 aa15.67■□□□□ 0.1
TRIM28-207ENST00000597136 REXO1L1PQ8IX06 675 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms