RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 CAND1Q86VP6 1230 aaKnown RBP23.56■■□□□ 1.36
SRRM1-222ENST00000596378 OSTM1Q86WC4 334 aa23.56■■□□□ 1.36
SRRM1-222ENST00000596378 CRYBG2Q8N1P7 616 aa23.56■■□□□ 1.36
SRRM1-222ENST00000596378 NETO2Q8NC67 525 aa23.56■■□□□ 1.36
SRRM1-222ENST00000596378 APPL2Q8NEU8 664 aa23.56■■□□□ 1.36
SRRM1-222ENST00000596378 SERAC1Q96JX3 654 aa23.56■■□□□ 1.36
SRRM1-222ENST00000596378 ALG13Q9NP73 1137 aaKnown RBP23.56■■□□□ 1.36
SRRM1-222ENST00000596378 CACNG4Q9UBN1 327 aa23.56■■□□□ 1.36
SRRM1-222ENST00000596378 TRIM33Q9UPN9 1127 aa23.56■■□□□ 1.36
SRRM1-222ENST00000596378 STARD13Q9Y3M8 1113 aa23.56■■□□□ 1.36
SRRM1-222ENST00000596378 EDF1O60869 148 aaKnown RBP23.56■■□□□ 1.36
SRRM1-222ENST00000596378 DESP17661 470 aa23.56■■□□□ 1.36
SRRM1-222ENST00000596378 CDC42EP1Q00587 391 aa23.56■■□□□ 1.36
SRRM1-222ENST00000596378 FAAP100Q0VG06 881 aa23.56■■□□□ 1.36
SRRM1-222ENST00000596378 DPYSL2Q16555 572 aa23.56■■□□□ 1.36
SRRM1-222ENST00000596378 ICE2Q659A1 982 aa23.56■■□□□ 1.36
SRRM1-222ENST00000596378 RNF43Q68DV7 783 aa23.56■■□□□ 1.36
SRRM1-222ENST00000596378 KIF2BQ8N4N8 673 aa23.56■■□□□ 1.36
SRRM1-222ENST00000596378 BANPQ8N9N5 519 aa23.56■■□□□ 1.36
SRRM1-222ENST00000596378 CENPIQ92674 756 aaPredicted RBP23.56■■□□□ 1.36
SRRM1-222ENST00000596378 GRAMD1AQ96CP6 724 aa23.56■■□□□ 1.36
SRRM1-222ENST00000596378 UNCXA6NJT0 531 aa23.55■■□□□ 1.36
SRRM1-222ENST00000596378 F5H423 210 aaPredicted RBP23.55■■□□□ 1.36
SRRM1-222ENST00000596378 ZWINTO95229 277 aa23.55■■□□□ 1.36
SRRM1-222ENST00000596378 METTL18O95568 372 aa23.55■■□□□ 1.36
SRRM1-222ENST00000596378 CD4P01730 458 aa23.55■■□□□ 1.36
SRRM1-222ENST00000596378 ACAT1P24752 427 aaKnown RBP23.55■■□□□ 1.36
SRRM1-222ENST00000596378 SNX16P57768 344 aa23.55■■□□□ 1.36
SRRM1-222ENST00000596378 RGS9BPQ6ZS82 235 aa23.55■■□□□ 1.36
SRRM1-222ENST00000596378 ZNF75CPQ92670 426 aaPredicted RBP23.55■■□□□ 1.36
SRRM1-222ENST00000596378 TMPRSS4Q9NRS4 437 aa23.55■■□□□ 1.36
SRRM1-222ENST00000596378 IPPQ9Y573 584 aa23.55■■□□□ 1.36
SRRM1-222ENST00000596378 CLDN5O00501 218 aa23.55■■□□□ 1.36
SRRM1-222ENST00000596378 CELF2O95319 508 aaKnown RBP23.55■■□□□ 1.36
SRRM1-222ENST00000596378 ZNF865P0CJ78 1059 aaPredicted RBP23.55■■□□□ 1.36
SRRM1-222ENST00000596378 TAF6P49848 677 aa23.55■■□□□ 1.36
SRRM1-222ENST00000596378 FAM228AQ86W67 206 aa23.55■■□□□ 1.36
SRRM1-222ENST00000596378 FAM131BQ86XD5 332 aa23.55■■□□□ 1.36
SRRM1-222ENST00000596378 ADGRF2Q8IZF7 708 aa23.55■■□□□ 1.36
SRRM1-222ENST00000596378 SLC44A1Q8WWI5 657 aa23.55■■□□□ 1.36
SRRM1-222ENST00000596378 ZNF560Q96MR9 790 aa23.55■■□□□ 1.36
SRRM1-222ENST00000596378 CSPG4P5Q96PW8 444 aa23.55■■□□□ 1.36
SRRM1-222ENST00000596378 KLC2Q9H0B6 622 aa23.55■■□□□ 1.36
SRRM1-222ENST00000596378 PLAC1Q9HBJ0 212 aa23.55■■□□□ 1.36
SRRM1-222ENST00000596378 SSU72Q9NP77 194 aaKnown RBP23.55■■□□□ 1.36
SRRM1-222ENST00000596378 CEP350Q5VT06 3117 aa23.55■■□□□ 1.36
SRRM1-222ENST00000596378 ZNF638Q14966 1978 aaKnown RBP23.54■■□□□ 1.36
SRRM1-222ENST00000596378 CFAP69A5D8W1 941 aa23.54■■□□□ 1.36
SRRM1-222ENST00000596378 TSHRP16473 764 aa23.54■■□□□ 1.36
SRRM1-222ENST00000596378 PITX1P78337 314 aaPredicted RBP23.54■■□□□ 1.36
SRRM1-222ENST00000596378 SMG8Q8ND04 991 aaKnown RBP23.54■■□□□ 1.36
SRRM1-222ENST00000596378 POPDC2Q9HBU9 364 aa23.54■■□□□ 1.36
SRRM1-222ENST00000596378 GDAP2Q9NXN4 497 aa23.54■■□□□ 1.36
SRRM1-222ENST00000596378 TTLL3Q9Y4R7 772 aa23.54■■□□□ 1.36
SRRM1-222ENST00000596378 IKBKGQ9Y6K9 419 aa23.54■■□□□ 1.36
SRRM1-222ENST00000596378 SYNJ2BP-COX16A0A087WUM0 186 aa23.54■■□□□ 1.36
SRRM1-222ENST00000596378 DCAF8L1A6NGE4 600 aa23.54■■□□□ 1.36
SRRM1-222ENST00000596378 CXorf49A8MYA2 514 aaPredicted RBP23.54■■□□□ 1.36
SRRM1-222ENST00000596378 BEST1O76090 585 aa23.54■■□□□ 1.36
SRRM1-222ENST00000596378 MT-ND3P03897 115 aa23.54■■□□□ 1.36
SRRM1-222ENST00000596378 GOT1P17174 413 aa23.54■■□□□ 1.36
SRRM1-222ENST00000596378 AMPD1P23109 780 aa23.54■■□□□ 1.36
SRRM1-222ENST00000596378 SEPT7Q16181 437 aaKnown RBP23.54■■□□□ 1.36
SRRM1-222ENST00000596378 MORN1Q5T089 497 aa23.54■■□□□ 1.36
SRRM1-222ENST00000596378 KCNT2Q6UVM3 1135 aa23.54■■□□□ 1.36
SRRM1-222ENST00000596378 ZFP42Q96MM3 310 aa23.54■■□□□ 1.36
SRRM1-222ENST00000596378 PLCD4Q9BRC7 762 aa23.54■■□□□ 1.36
SRRM1-222ENST00000596378 COX16Q9P0S2 106 aa23.54■■□□□ 1.36
SRRM1-222ENST00000596378 ZC3H7BQ9UGR2 993 aaKnown RBP23.54■■□□□ 1.36
SRRM1-222ENST00000596378 C1QAP02745 245 aa23.53■■□□□ 1.36
SRRM1-222ENST00000596378 INHBAP08476 426 aa23.53■■□□□ 1.36
SRRM1-222ENST00000596378 AXLP30530 894 aa23.53■■□□□ 1.36
SRRM1-222ENST00000596378 RABGGTBP53611 331 aa23.53■■□□□ 1.36
SRRM1-222ENST00000596378 ADIGQ0VDE8 80 aa23.53■■□□□ 1.36
SRRM1-222ENST00000596378 MAP2K5Q13163 448 aa23.53■■□□□ 1.36
SRRM1-222ENST00000596378 SNCBQ16143 134 aa23.53■■□□□ 1.36
SRRM1-222ENST00000596378 OTOAQ7RTW8 1153 aa23.53■■□□□ 1.36
SRRM1-222ENST00000596378 PIGZQ86VD9 579 aa23.53■■□□□ 1.36
SRRM1-222ENST00000596378 CTAGE3PQ8IX95 158 aa23.53■■□□□ 1.36
SRRM1-222ENST00000596378 GBP7Q8N8V2 638 aaPredicted RBP23.53■■□□□ 1.36
SRRM1-222ENST00000596378 FAM149B1Q96BN6 582 aa23.53■■□□□ 1.36
SRRM1-222ENST00000596378 MYLK2Q9H1R3 596 aa23.53■■□□□ 1.36
SRRM1-222ENST00000596378 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.53■■□□□ 1.36
SRRM1-222ENST00000596378 IGF2BP3O00425 579 aaKnown RBP eCLIP23.53■■□□□ 1.36
SRRM1-222ENST00000596378 MGRN1O60291 552 aa23.53■■□□□ 1.36
SRRM1-222ENST00000596378 HUS1O60921 280 aa23.53■■□□□ 1.36
SRRM1-222ENST00000596378 KCNE1P15382 129 aa23.53■■□□□ 1.36
SRRM1-222ENST00000596378 RPL34P49207 117 aaKnown RBP23.53■■□□□ 1.36
SRRM1-222ENST00000596378 LILRA4P59901 499 aa23.53■■□□□ 1.36
SRRM1-222ENST00000596378 SLC45A4Q5BKX6 768 aa23.53■■□□□ 1.36
SRRM1-222ENST00000596378 CDKL3Q8IVW4 592 aaPredicted RBP23.53■■□□□ 1.36
SRRM1-222ENST00000596378 DEFB106AQ8N104 65 aa23.53■■□□□ 1.36
SRRM1-222ENST00000596378 ZNF276Q8N554 614 aa23.53■■□□□ 1.36
SRRM1-222ENST00000596378 PPM1NQ8N819 430 aa23.53■■□□□ 1.36
SRRM1-222ENST00000596378 MEIS3P2A8K0S8 358 aa23.52■■□□□ 1.36
SRRM1-222ENST00000596378 GRIA1P42261 906 aa23.52■■□□□ 1.36
SRRM1-222ENST00000596378 PCBP1Q15365 356 aaKnown RBP eCLIP23.52■■□□□ 1.36
SRRM1-222ENST00000596378 NCBP2-AS2Q69YL0 99 aa23.52■■□□□ 1.36
SRRM1-222ENST00000596378 VSIG1Q86XK7 387 aa23.52■■□□□ 1.36
SRRM1-222ENST00000596378 MPP5Q8N3R9 675 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms