RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 CSGALNACT1Q8TDX6 532 aa15.02■□□□□ -0
LIG1-208ENST00000595758 OSCP1Q8WVF1 389 aa15.02■□□□□ -0
LIG1-208ENST00000595758 ASIC4Q96FT7 647 aa15.02■□□□□ -0
LIG1-208ENST00000595758 HAUS4Q9H6D7 363 aa15.02■□□□□ -0
LIG1-208ENST00000595758 CA14Q9ULX7 337 aa15.02■□□□□ -0
LIG1-208ENST00000595758 WNT6Q9Y6F9 365 aa15.02■□□□□ -0
LIG1-208ENST00000595758 SLC12A8A0AV02 714 aa15.01□□□□□ -0.01
LIG1-208ENST00000595758 TMEM221A6NGB7 291 aa15.01□□□□□ -0.01
LIG1-208ENST00000595758 M0R296 226 aa15.01□□□□□ -0.01
LIG1-208ENST00000595758 ARNTLO00327 626 aa15.01□□□□□ -0.01
LIG1-208ENST00000595758 SLC9A3R1O14745 358 aaPredicted RBP15.01□□□□□ -0.01
LIG1-208ENST00000595758 CAPN9O14815 690 aa15.01□□□□□ -0.01
LIG1-208ENST00000595758 SCAMP3O14828 347 aaKnown RBP15.01□□□□□ -0.01
LIG1-208ENST00000595758 FYNP06241 537 aa15.01□□□□□ -0.01
LIG1-208ENST00000595758 GLI1P08151 1106 aa15.01□□□□□ -0.01
LIG1-208ENST00000595758 SKILP12757 684 aa15.01□□□□□ -0.01
LIG1-208ENST00000595758 UNGP13051 313 aaPredicted RBP15.01□□□□□ -0.01
LIG1-208ENST00000595758 MMP8P22894 467 aa15.01□□□□□ -0.01
LIG1-208ENST00000595758 NSFP46459 744 aaKnown RBP15.01□□□□□ -0.01
LIG1-208ENST00000595758 TNK2Q07912 1038 aa15.01□□□□□ -0.01
LIG1-208ENST00000595758 TRIM68Q6AZZ1 485 aa15.01□□□□□ -0.01
LIG1-208ENST00000595758 MSANTD2Q6P1R3 559 aa15.01□□□□□ -0.01
LIG1-208ENST00000595758 OLFML1Q6UWY5 402 aa15.01□□□□□ -0.01
LIG1-208ENST00000595758 MMS22LQ6ZRQ5 1243 aa15.01□□□□□ -0.01
LIG1-208ENST00000595758 ZNF571Q7Z3V5 609 aaPredicted RBP15.01□□□□□ -0.01
LIG1-208ENST00000595758 SIX5Q8N196 739 aa15.01□□□□□ -0.01
LIG1-208ENST00000595758 SLC30A5Q8TAD4 765 aa15.01□□□□□ -0.01
LIG1-208ENST00000595758 WBP2Q969T9 261 aa15.01□□□□□ -0.01
LIG1-208ENST00000595758 SYT11Q9BT88 431 aa15.01□□□□□ -0.01
LIG1-208ENST00000595758 LINC00597Q9H2U6 94 aa15.01□□□□□ -0.01
LIG1-208ENST00000595758 EBF3Q9H4W6 596 aa15.01□□□□□ -0.01
LIG1-208ENST00000595758 POPDC2Q9HBU9 364 aa15.01□□□□□ -0.01
LIG1-208ENST00000595758 ARHGEF3Q9NR81 526 aa15.01□□□□□ -0.01
LIG1-208ENST00000595758 ASNSD1Q9NWL6 643 aa15.01□□□□□ -0.01
LIG1-208ENST00000595758 TBC1D14Q9P2M4 693 aa15.01□□□□□ -0.01
LIG1-208ENST00000595758 SFMBT1Q9UHJ3 866 aa15.01□□□□□ -0.01
LIG1-208ENST00000595758 NAALADL1Q9UQQ1 740 aa15.01□□□□□ -0.01
LIG1-208ENST00000595758 BZW2Q9Y6E2 419 aaKnown RBP15.01□□□□□ -0.01
LIG1-208ENST00000595758 TECTAO75443 2155 aa15□□□□□ -0.01
LIG1-208ENST00000595758 HSF2BPO75031 334 aa15□□□□□ -0.01
LIG1-208ENST00000595758 HMBSP08397 361 aa15□□□□□ -0.01
LIG1-208ENST00000595758 ARSAP15289 507 aa15□□□□□ -0.01
LIG1-208ENST00000595758 ZNF75DP51815 510 aa15□□□□□ -0.01
LIG1-208ENST00000595758 KPNA1P52294 538 aaPredicted RBP15□□□□□ -0.01
LIG1-208ENST00000595758 CENPCQ03188 943 aa15□□□□□ -0.01
LIG1-208ENST00000595758 RUNX3Q13761 415 aa15□□□□□ -0.01
LIG1-208ENST00000595758 MLF2Q15773 248 aaPredicted RBP15□□□□□ -0.01
LIG1-208ENST00000595758 ITPRIPL2Q3MIP1 535 aa15□□□□□ -0.01
LIG1-208ENST00000595758 C2CD6Q53TS8 623 aa15□□□□□ -0.01
LIG1-208ENST00000595758 IER5LQ5T953 404 aa15□□□□□ -0.01
LIG1-208ENST00000595758 HTR3DQ70Z44 454 aa15□□□□□ -0.01
LIG1-208ENST00000595758 SLC26A9Q7LBE3 791 aa15□□□□□ -0.01
LIG1-208ENST00000595758 XYLT1Q86Y38 959 aa15□□□□□ -0.01
LIG1-208ENST00000595758 TTC8Q8TAM2 541 aa15□□□□□ -0.01
LIG1-208ENST00000595758 ATP2A3Q93084 1043 aa15□□□□□ -0.01
LIG1-208ENST00000595758 SHDQ96IW2 340 aa15□□□□□ -0.01
LIG1-208ENST00000595758 PIWIL1Q96J94 861 aaKnown RBP15□□□□□ -0.01
LIG1-208ENST00000595758 HPS4Q9NQG7 708 aa15□□□□□ -0.01
LIG1-208ENST00000595758 HEBP1Q9NRV9 189 aa15□□□□□ -0.01
LIG1-208ENST00000595758 GTSE1Q9NYZ3 720 aa15□□□□□ -0.01
LIG1-208ENST00000595758 ADAM22Q9P0K1 906 aa15□□□□□ -0.01
LIG1-208ENST00000595758 LSM7Q9UK45 103 aaKnown RBP15□□□□□ -0.01
LIG1-208ENST00000595758 HBS1LQ9Y450 684 aaKnown RBP15□□□□□ -0.01
LIG1-208ENST00000595758 KRBA1A5PL33 1030 aa14.99□□□□□ -0.01
LIG1-208ENST00000595758 GOLGA8SH3BPF8 625 aa14.99□□□□□ -0.01
LIG1-208ENST00000595758 GREM1O60565 184 aa14.99□□□□□ -0.01
LIG1-208ENST00000595758 GRAP2O75791 330 aa14.99□□□□□ -0.01
LIG1-208ENST00000595758 STC2O76061 302 aa14.99□□□□□ -0.01
LIG1-208ENST00000595758 SERPING1P05155 500 aa14.99□□□□□ -0.01
LIG1-208ENST00000595758 GLULP15104 373 aa14.99□□□□□ -0.01
LIG1-208ENST00000595758 SCNN1AP37088 669 aa14.99□□□□□ -0.01
LIG1-208ENST00000595758 PRKCQQ04759 706 aa14.99□□□□□ -0.01
LIG1-208ENST00000595758 TSR1Q2NL82 804 aaKnown RBP14.99□□□□□ -0.01
LIG1-208ENST00000595758 EML3Q32P44 896 aa14.99□□□□□ -0.01
LIG1-208ENST00000595758 TDRD12Q587J7 1177 aaKnown RBP14.99□□□□□ -0.01
LIG1-208ENST00000595758 DCAF6Q58WW2 860 aa14.99□□□□□ -0.01
LIG1-208ENST00000595758 FAM102AQ5T9C2 384 aaPredicted RBP14.99□□□□□ -0.01
LIG1-208ENST00000595758 SYPL2Q5VXT5 272 aa14.99□□□□□ -0.01
LIG1-208ENST00000595758 HGSNATQ68CP4 663 aa14.99□□□□□ -0.01
LIG1-208ENST00000595758 ACAD10Q6JQN1 1059 aa14.99□□□□□ -0.01
LIG1-208ENST00000595758 TMC6Q7Z403 805 aa14.99□□□□□ -0.01
LIG1-208ENST00000595758 PHF13Q86YI8 300 aaPredicted RBP14.99□□□□□ -0.01
LIG1-208ENST00000595758 DEFB106AQ8N104 65 aa14.99□□□□□ -0.01
LIG1-208ENST00000595758 CPA6Q8N4T0 437 aa14.99□□□□□ -0.01
LIG1-208ENST00000595758 OR8K1Q8NGG5 319 aa14.99□□□□□ -0.01
LIG1-208ENST00000595758 DQX1Q8TE96 717 aaKnown RBP14.99□□□□□ -0.01
LIG1-208ENST00000595758 PLD4Q96BZ4 506 aa14.99□□□□□ -0.01
LIG1-208ENST00000595758 OTUB2Q96DC9 234 aa14.99□□□□□ -0.01
LIG1-208ENST00000595758 MRFAP1L1Q96HT8 127 aa14.99□□□□□ -0.01
LIG1-208ENST00000595758 SLC2A13Q96QE2 648 aa14.99□□□□□ -0.01
LIG1-208ENST00000595758 C11orf70Q9BRQ4 267 aa14.99□□□□□ -0.01
LIG1-208ENST00000595758 C1QTNF1Q9BXJ1 281 aa14.99□□□□□ -0.01
LIG1-208ENST00000595758 DCLK3Q9C098 648 aa14.99□□□□□ -0.01
LIG1-208ENST00000595758 MFSD1Q9H3U5 465 aa14.99□□□□□ -0.01
LIG1-208ENST00000595758 PIAS3Q9Y6X2 628 aa14.99□□□□□ -0.01
LIG1-208ENST00000595758 TRIOO75962 3097 aa14.99□□□□□ -0.01
LIG1-208ENST00000595758 HELZP42694 1942 aaKnown RBP14.99□□□□□ -0.01
LIG1-208ENST00000595758 FAM86C2PA6NEL3 165 aa14.98□□□□□ -0.01
LIG1-208ENST00000595758 DDX3XO00571 662 aaKnown RBP eCLIP14.98□□□□□ -0.01
LIG1-208ENST00000595758 MSI1O43347 362 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms