RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 DDX42Q86XP3 938 aaKnown RBP eCLIP14.43□□□□□ -0.1
SHKBP1-207ENST00000595631 FMNL3Q8IVF7 1028 aa14.43□□□□□ -0.1
SHKBP1-207ENST00000595631 CPA5Q8WXQ8 436 aa14.43□□□□□ -0.1
SHKBP1-207ENST00000595631 PCDHB18PQ96TA0 734 aa14.43□□□□□ -0.1
SHKBP1-207ENST00000595631 DDX23Q9BUQ8 820 aaKnown RBP14.43□□□□□ -0.1
SHKBP1-207ENST00000595631 ABCC13Q9NSE7 274 aa14.43□□□□□ -0.1
SHKBP1-207ENST00000595631 MARCH2Q9P0N8 246 aa14.43□□□□□ -0.1
SHKBP1-207ENST00000595631 NDRG2Q9UN36 371 aaKnown RBP14.43□□□□□ -0.1
SHKBP1-207ENST00000595631 KANSL1LA0AUZ9 987 aa14.42□□□□□ -0.1
SHKBP1-207ENST00000595631 SLC12A8A0AV02 714 aa14.42□□□□□ -0.1
SHKBP1-207ENST00000595631 E2F8A0AVK6 867 aa14.42□□□□□ -0.1
SHKBP1-207ENST00000595631 SPECC1L-ADORA2AF8WAN1 911 aa14.42□□□□□ -0.1
SHKBP1-207ENST00000595631 STC2O76061 302 aa14.42□□□□□ -0.1
SHKBP1-207ENST00000595631 CYP17A1P05093 508 aa14.42□□□□□ -0.1
SHKBP1-207ENST00000595631 TARSP26639 723 aaKnown RBP14.42□□□□□ -0.1
SHKBP1-207ENST00000595631 UBXN2BQ14CS0 331 aa14.42□□□□□ -0.1
SHKBP1-207ENST00000595631 ASTLQ6HA08 431 aaPredicted RBP14.42□□□□□ -0.1
SHKBP1-207ENST00000595631 OR6B2Q6IFH4 312 aa14.42□□□□□ -0.1
SHKBP1-207ENST00000595631 TADA2BQ86TJ2 420 aa14.42□□□□□ -0.1
SHKBP1-207ENST00000595631 SUGP1Q8IWZ8 645 aaKnown RBP14.42□□□□□ -0.1
SHKBP1-207ENST00000595631 TMEM35BQ8NCS4 154 aa14.42□□□□□ -0.1
SHKBP1-207ENST00000595631 RNF139Q8WU17 664 aa14.42□□□□□ -0.1
SHKBP1-207ENST00000595631 FAM149B1Q96BN6 582 aa14.42□□□□□ -0.1
SHKBP1-207ENST00000595631 SHDQ96IW2 340 aa14.42□□□□□ -0.1
SHKBP1-207ENST00000595631 NOX5Q96PH1 765 aa14.42□□□□□ -0.1
SHKBP1-207ENST00000595631 CDK5RAP1Q96SZ6 601 aaKnown RBP14.42□□□□□ -0.1
SHKBP1-207ENST00000595631 ECT2Q9H8V3 914 aa14.42□□□□□ -0.1
SHKBP1-207ENST00000595631 LTB4R2Q9NPC1 389 aa14.42□□□□□ -0.1
SHKBP1-207ENST00000595631 NAALADL1Q9UQQ1 740 aa14.42□□□□□ -0.1
SHKBP1-207ENST00000595631 CEP83Q9Y592 693 aa14.42□□□□□ -0.1
SHKBP1-207ENST00000595631 F5P12259 2224 aa14.42□□□□□ -0.1
SHKBP1-207ENST00000595631 GRAP2O75791 330 aa14.41□□□□□ -0.1
SHKBP1-207ENST00000595631 KLKB1P03952 638 aa14.41□□□□□ -0.1
SHKBP1-207ENST00000595631 DCNP07585 359 aaKnown RBP14.41□□□□□ -0.1
SHKBP1-207ENST00000595631 NCAM1P13591 858 aa14.41□□□□□ -0.1
SHKBP1-207ENST00000595631 AOC1P19801 751 aa14.41□□□□□ -0.1
SHKBP1-207ENST00000595631 GJA4P35212 333 aa14.41□□□□□ -0.1
SHKBP1-207ENST00000595631 PITX1P78337 314 aaPredicted RBP14.41□□□□□ -0.1
SHKBP1-207ENST00000595631 PON2Q15165 354 aa14.41□□□□□ -0.1
SHKBP1-207ENST00000595631 GAB4Q2WGN9 574 aa14.41□□□□□ -0.1
SHKBP1-207ENST00000595631 SYPL2Q5VXT5 272 aa14.41□□□□□ -0.1
SHKBP1-207ENST00000595631 MSANTD2Q6P1R3 559 aa14.41□□□□□ -0.1
SHKBP1-207ENST00000595631 IRF2BP2Q7Z5L9 587 aa14.41□□□□□ -0.1
SHKBP1-207ENST00000595631 ZNF677Q86XU0 584 aa14.41□□□□□ -0.1
SHKBP1-207ENST00000595631 CCDC105Q8IYK2 499 aa14.41□□□□□ -0.1
SHKBP1-207ENST00000595631 CPA6Q8N4T0 437 aa14.41□□□□□ -0.1
SHKBP1-207ENST00000595631 PJA1Q8NG27 643 aa14.41□□□□□ -0.1
SHKBP1-207ENST00000595631 SLC30A5Q8TAD4 765 aa14.41□□□□□ -0.1
SHKBP1-207ENST00000595631 OLIG1Q8TAK6 271 aa14.41□□□□□ -0.1
SHKBP1-207ENST00000595631 ADAM32Q8TC27 787 aa14.41□□□□□ -0.1
SHKBP1-207ENST00000595631 IPO4Q8TEX9 1081 aaKnown RBP14.41□□□□□ -0.1
SHKBP1-207ENST00000595631 CPLX3Q8WVH0 158 aa14.41□□□□□ -0.1
SHKBP1-207ENST00000595631 FAM3CQ92520 227 aa14.41□□□□□ -0.1
SHKBP1-207ENST00000595631 ATP2A3Q93084 1043 aa14.41□□□□□ -0.1
SHKBP1-207ENST00000595631 RBSNQ9H1K0 784 aa14.41□□□□□ -0.1
SHKBP1-207ENST00000595631 SYNCQ9H7C4 482 aa14.41□□□□□ -0.1
SHKBP1-207ENST00000595631 OLA1Q9NTK5 396 aaKnown RBP14.41□□□□□ -0.1
SHKBP1-207ENST00000595631 RAPGEFL1Q9UHV5 662 aa14.41□□□□□ -0.1
SHKBP1-207ENST00000595631 ZDBF2Q9HCK1 2354 aa14.41□□□□□ -0.1
SHKBP1-207ENST00000595631 FAM170BA6NMN3 283 aa14.4□□□□□ -0.1
SHKBP1-207ENST00000595631 AP5Z1O43299 807 aa14.4□□□□□ -0.1
SHKBP1-207ENST00000595631 NFATC1O95644 943 aa14.4□□□□□ -0.1
SHKBP1-207ENST00000595631 LSM8O95777 96 aaKnown RBP14.4□□□□□ -0.1
SHKBP1-207ENST00000595631 CYP1A1P04798 512 aaPredicted RBP14.4□□□□□ -0.1
SHKBP1-207ENST00000595631 GLULP15104 373 aa14.4□□□□□ -0.1
SHKBP1-207ENST00000595631 FERP16591 822 aa14.4□□□□□ -0.1
SHKBP1-207ENST00000595631 AVPR2P30518 371 aa14.4□□□□□ -0.1
SHKBP1-207ENST00000595631 CORO1AP31146 461 aaKnown RBP14.4□□□□□ -0.1
SHKBP1-207ENST00000595631 CLCN5P51795 746 aa14.4□□□□□ -0.1
SHKBP1-207ENST00000595631 GOLGA8FQ08AF8 430 aa14.4□□□□□ -0.1
SHKBP1-207ENST00000595631 GOLGA8DPQ0D2H9 430 aa14.4□□□□□ -0.1
SHKBP1-207ENST00000595631 DHCR24Q15392 516 aa14.4□□□□□ -0.1
SHKBP1-207ENST00000595631 ASIC2Q16515 512 aa14.4□□□□□ -0.1
SHKBP1-207ENST00000595631 OLFML1Q6UWY5 402 aa14.4□□□□□ -0.1
SHKBP1-207ENST00000595631 ZNF852Q6ZMS4 543 aa14.4□□□□□ -0.1
SHKBP1-207ENST00000595631 Q6ZNB5 142 aa14.4□□□□□ -0.1
SHKBP1-207ENST00000595631 HTR3DQ70Z44 454 aa14.4□□□□□ -0.1
SHKBP1-207ENST00000595631 PHLDB2Q86SQ0 1253 aa14.4□□□□□ -0.1
SHKBP1-207ENST00000595631 RALGPS2Q86X27 583 aaPredicted RBP14.4□□□□□ -0.1
SHKBP1-207ENST00000595631 ERICH1Q86X53 443 aa14.4□□□□□ -0.1
SHKBP1-207ENST00000595631 GAS2L3Q86XJ1 694 aa14.4□□□□□ -0.1
SHKBP1-207ENST00000595631 ADGRG2Q8IZP9 1017 aa14.4□□□□□ -0.1
SHKBP1-207ENST00000595631 ZNF687Q8N1G0 1237 aa14.4□□□□□ -0.1
SHKBP1-207ENST00000595631 DQX1Q8TE96 717 aaKnown RBP14.4□□□□□ -0.1
SHKBP1-207ENST00000595631 GOLGA1Q92805 767 aa14.4□□□□□ -0.1
SHKBP1-207ENST00000595631 AGPAT1Q99943 283 aa14.4□□□□□ -0.1
SHKBP1-207ENST00000595631 C8orf33Q9H7E9 229 aaPredicted RBP14.4□□□□□ -0.1
SHKBP1-207ENST00000595631 SEPT11Q9NVA2 429 aaKnown RBP14.4□□□□□ -0.1
SHKBP1-207ENST00000595631 LSM7Q9UK45 103 aaKnown RBP14.4□□□□□ -0.1
SHKBP1-207ENST00000595631 STRIP2Q9ULQ0 834 aa14.4□□□□□ -0.1
SHKBP1-207ENST00000595631 GOLGA8SH3BPF8 625 aa14.39□□□□□ -0.11
SHKBP1-207ENST00000595631 SLC9A3R1O14745 358 aaPredicted RBP14.39□□□□□ -0.11
SHKBP1-207ENST00000595631 SART1O43290 800 aaKnown RBP14.39□□□□□ -0.11
SHKBP1-207ENST00000595631 SKILP12757 684 aa14.39□□□□□ -0.11
SHKBP1-207ENST00000595631 YWHAZP63104 245 aaKnown RBP14.39□□□□□ -0.11
SHKBP1-207ENST00000595631 COG7P83436 770 aa14.39□□□□□ -0.11
SHKBP1-207ENST00000595631 SLC6A3Q01959 620 aa14.39□□□□□ -0.11
SHKBP1-207ENST00000595631 FZD5Q13467 585 aa14.39□□□□□ -0.11
SHKBP1-207ENST00000595631 CLEC16AQ2KHT3 1053 aa14.39□□□□□ -0.11
SHKBP1-207ENST00000595631 FIGNQ5HY92 759 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms