RNA–Protein interactions for RNA: ENST00000595343.5

PDE4C-208, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 420 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-208ENST00000595343 FAM221BA6H8Z2 402 aa19.66■□□□□ 0.74
PDE4C-208ENST00000595343 POLR2DO15514 142 aaKnown RBP19.66■□□□□ 0.74
PDE4C-208ENST00000595343 SYPP08247 313 aa19.66■□□□□ 0.74
PDE4C-208ENST00000595343 ATP5C1P36542 298 aaKnown RBP19.66■□□□□ 0.74
PDE4C-208ENST00000595343 NDST1P52848 882 aa19.66■□□□□ 0.74
PDE4C-208ENST00000595343 CHCHD4Q8N4Q1 142 aa19.66■□□□□ 0.74
PDE4C-208ENST00000595343 ZNF419Q96HQ0 510 aaPredicted RBP19.66■□□□□ 0.74
PDE4C-208ENST00000595343 ZNF396Q96N95 335 aaPredicted RBP19.66■□□□□ 0.74
PDE4C-208ENST00000595343 SLC6A17Q9H1V8 727 aa19.66■□□□□ 0.74
PDE4C-208ENST00000595343 CD93Q9NPY3 652 aa19.66■□□□□ 0.74
PDE4C-208ENST00000595343 OSER1Q9NX31 292 aa19.66■□□□□ 0.74
PDE4C-208ENST00000595343 HMGXB4Q9UGU5 601 aa19.66■□□□□ 0.74
PDE4C-208ENST00000595343 LSM7Q9UK45 103 aaKnown RBP19.66■□□□□ 0.74
PDE4C-208ENST00000595343 ANKRD11Q6UB99 2663 aaPredicted RBP19.65■□□□□ 0.74
PDE4C-208ENST00000595343 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.65■□□□□ 0.74
PDE4C-208ENST00000595343 NDUFS2O75306 463 aa19.65■□□□□ 0.74
PDE4C-208ENST00000595343 YEATS4O95619 227 aa19.65■□□□□ 0.74
PDE4C-208ENST00000595343 P4HA1P13674 534 aa19.65■□□□□ 0.74
PDE4C-208ENST00000595343 DGKGP49619 791 aa19.65■□□□□ 0.74
PDE4C-208ENST00000595343 GOLGA8FQ08AF8 430 aa19.65■□□□□ 0.74
PDE4C-208ENST00000595343 GOLGA8DPQ0D2H9 430 aa19.65■□□□□ 0.74
PDE4C-208ENST00000595343 HNRNPDQ14103 355 aaKnown RBP19.65■□□□□ 0.74
PDE4C-208ENST00000595343 SGSM1Q2NKQ1 1148 aa19.65■□□□□ 0.74
PDE4C-208ENST00000595343 GPRIN1Q7Z2K8 1008 aa19.65■□□□□ 0.74
PDE4C-208ENST00000595343 UNC93AQ86WB7 457 aa19.65■□□□□ 0.74
PDE4C-208ENST00000595343 RGL4Q8IZJ4 473 aa19.65■□□□□ 0.74
PDE4C-208ENST00000595343 C12orf29Q8N999 325 aa19.65■□□□□ 0.74
PDE4C-208ENST00000595343 GOLGA5Q8TBA6 731 aa19.65■□□□□ 0.74
PDE4C-208ENST00000595343 MRGPRX1Q96LB2 322 aa19.65■□□□□ 0.74
PDE4C-208ENST00000595343 FAM124BQ9H5Z6 455 aaPredicted RBP19.65■□□□□ 0.74
PDE4C-208ENST00000595343 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.65■□□□□ 0.74
PDE4C-208ENST00000595343 FAM49BQ9NUQ9 324 aa19.65■□□□□ 0.74
PDE4C-208ENST00000595343 DMAC2Q9NW81 257 aa19.65■□□□□ 0.74
PDE4C-208ENST00000595343 CACNA2D2Q9NY47 1150 aa19.65■□□□□ 0.74
PDE4C-208ENST00000595343 SCML2Q9UQR0 700 aa19.65■□□□□ 0.74
PDE4C-208ENST00000595343 MYH10P35580 1976 aa19.64■□□□□ 0.74
PDE4C-208ENST00000595343 WASH3PC4AMC7 463 aa19.64■□□□□ 0.73
PDE4C-208ENST00000595343 GFRA2O00451 464 aa19.64■□□□□ 0.73
PDE4C-208ENST00000595343 CYP26A1O43174 497 aa19.64■□□□□ 0.73
PDE4C-208ENST00000595343 GJB3O75712 270 aa19.64■□□□□ 0.73
PDE4C-208ENST00000595343 CISD3P0C7P0 127 aa19.64■□□□□ 0.73
PDE4C-208ENST00000595343 DLG4P78352 724 aa19.64■□□□□ 0.73
PDE4C-208ENST00000595343 RING1Q06587 406 aa19.64■□□□□ 0.73
PDE4C-208ENST00000595343 CUL4BQ13620 913 aa19.64■□□□□ 0.73
PDE4C-208ENST00000595343 ZNF423Q2M1K9 1284 aa19.64■□□□□ 0.73
PDE4C-208ENST00000595343 PLEKHG6Q3KR16 790 aa19.64■□□□□ 0.73
PDE4C-208ENST00000595343 SYCP2LQ5T4T6 812 aa19.64■□□□□ 0.73
PDE4C-208ENST00000595343 LRSAM1Q6UWE0 723 aa19.64■□□□□ 0.73
PDE4C-208ENST00000595343 RAB44Q7Z6P3 723 aaPredicted RBP19.64■□□□□ 0.73
PDE4C-208ENST00000595343 CAMK1GQ96NX5 476 aa19.64■□□□□ 0.73
PDE4C-208ENST00000595343 HHLA1C9JL84 531 aa19.63■□□□□ 0.73
PDE4C-208ENST00000595343 MDM4O15151 490 aa19.63■□□□□ 0.73
PDE4C-208ENST00000595343 SH3BP5O60239 455 aa19.63■□□□□ 0.73
PDE4C-208ENST00000595343 RPN1P04843 607 aaKnown RBP19.63■□□□□ 0.73
PDE4C-208ENST00000595343 FAM200BP0CF97 657 aa19.63■□□□□ 0.73
PDE4C-208ENST00000595343 ADORA2BP29275 332 aa19.63■□□□□ 0.73
PDE4C-208ENST00000595343 AFMP43652 599 aa19.63■□□□□ 0.73
PDE4C-208ENST00000595343 SLC14A1Q13336 389 aa19.63■□□□□ 0.73
PDE4C-208ENST00000595343 ZACNQ401N2 412 aa19.63■□□□□ 0.73
PDE4C-208ENST00000595343 KLHDC10Q6PID8 442 aa19.63■□□□□ 0.73
PDE4C-208ENST00000595343 KIAA1324Q6UXG2 1013 aaKnown RBP19.63■□□□□ 0.73
PDE4C-208ENST00000595343 Q6ZNB5 142 aa19.63■□□□□ 0.73
PDE4C-208ENST00000595343 CLEC20AQ6ZU45 233 aa19.63■□□□□ 0.73
PDE4C-208ENST00000595343 SLC9A9Q8IVB4 645 aa19.63■□□□□ 0.73
PDE4C-208ENST00000595343 FOXJ1Q92949 421 aa19.63■□□□□ 0.73
PDE4C-208ENST00000595343 BHMTQ93088 406 aa19.63■□□□□ 0.73
PDE4C-208ENST00000595343 NMUR1Q9HB89 426 aa19.63■□□□□ 0.73
PDE4C-208ENST00000595343 PLK2Q9NYY3 685 aa19.63■□□□□ 0.73
PDE4C-208ENST00000595343 SUSD2Q9UGT4 822 aa19.63■□□□□ 0.73
PDE4C-208ENST00000595343 NUDT5Q9UKK9 219 aa19.63■□□□□ 0.73
PDE4C-208ENST00000595343 LHX6Q9UPM6 363 aa19.63■□□□□ 0.73
PDE4C-208ENST00000595343 RARGP13631 454 aa19.62■□□□□ 0.73
PDE4C-208ENST00000595343 ACO1P21399 889 aaKnown RBP19.62■□□□□ 0.73
PDE4C-208ENST00000595343 MAOBP27338 520 aa19.62■□□□□ 0.73
PDE4C-208ENST00000595343 ASPAP45381 313 aa19.62■□□□□ 0.73
PDE4C-208ENST00000595343 PLA2G4AP47712 749 aa19.62■□□□□ 0.73
PDE4C-208ENST00000595343 TRIP6Q15654 476 aaKnown RBP19.62■□□□□ 0.73
PDE4C-208ENST00000595343 WDR45BQ5MNZ6 344 aa19.62■□□□□ 0.73
PDE4C-208ENST00000595343 SPOPLQ6IQ16 392 aa19.62■□□□□ 0.73
PDE4C-208ENST00000595343 TAF4BQ92750 862 aa19.62■□□□□ 0.73
PDE4C-208ENST00000595343 JAKMIP2Q96AA8 810 aa19.62■□□□□ 0.73
PDE4C-208ENST00000595343 P2RY11Q96G91 374 aa19.62■□□□□ 0.73
PDE4C-208ENST00000595343 HNRNPABQ99729 332 aaKnown RBP19.62■□□□□ 0.73
PDE4C-208ENST00000595343 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.62■□□□□ 0.73
PDE4C-208ENST00000595343 DNMT3LQ9UJW3 386 aa19.62■□□□□ 0.73
PDE4C-208ENST00000595343 FBXO10Q9UK96 956 aa19.62■□□□□ 0.73
PDE4C-208ENST00000595343 PCDHA5Q9Y5H7 936 aa19.62■□□□□ 0.73
PDE4C-208ENST00000595343 FASNP49327 2511 aaKnown RBP19.62■□□□□ 0.73
PDE4C-208ENST00000595343 A0A1W2PQH9 124 aa19.61■□□□□ 0.73
PDE4C-208ENST00000595343 TAF4O00268 1085 aa19.61■□□□□ 0.73
PDE4C-208ENST00000595343 ASS1P00966 412 aaKnown RBP19.61■□□□□ 0.73
PDE4C-208ENST00000595343 CAPNS1P04632 268 aa19.61■□□□□ 0.73
PDE4C-208ENST00000595343 GNSP15586 552 aa19.61■□□□□ 0.73
PDE4C-208ENST00000595343 CD6P30203 668 aa19.61■□□□□ 0.73
PDE4C-208ENST00000595343 STK4Q13043 487 aa19.61■□□□□ 0.73
PDE4C-208ENST00000595343 C10orf120Q5SQS8 335 aa19.61■□□□□ 0.73
PDE4C-208ENST00000595343 SV2AQ7L0J3 742 aa19.61■□□□□ 0.73
PDE4C-208ENST00000595343 GRAMD1CQ8IYS0 662 aa19.61■□□□□ 0.73
PDE4C-208ENST00000595343 TMC2Q8TDI7 906 aa19.61■□□□□ 0.73
PDE4C-208ENST00000595343 TMEM174Q8WUU8 243 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms