RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 SGK1O00141 431 aa13.6□□□□□ -0.23
SCAF1-202ENST00000595242 ATXN7O15265 892 aaPredicted RBP13.6□□□□□ -0.23
SCAF1-202ENST00000595242 GJB3O75712 270 aa13.6□□□□□ -0.23
SCAF1-202ENST00000595242 NDUFA10O95299 355 aa13.6□□□□□ -0.23
SCAF1-202ENST00000595242 KLF8O95600 359 aaPredicted RBP13.6□□□□□ -0.23
SCAF1-202ENST00000595242 CXCL8P10145 99 aa13.6□□□□□ -0.23
SCAF1-202ENST00000595242 HAPLN1P10915 354 aaPredicted RBP13.6□□□□□ -0.23
SCAF1-202ENST00000595242 CYP3A5P20815 502 aa13.6□□□□□ -0.23
SCAF1-202ENST00000595242 KLK7P49862 253 aa13.6□□□□□ -0.23
SCAF1-202ENST00000595242 LILRA4P59901 499 aa13.6□□□□□ -0.23
SCAF1-202ENST00000595242 MCCD1P59942 119 aaPredicted RBP13.6□□□□□ -0.23
SCAF1-202ENST00000595242 SNRPFP62306 86 aaKnown RBP13.6□□□□□ -0.23
SCAF1-202ENST00000595242 ZNF33AQ06730 810 aa13.6□□□□□ -0.23
SCAF1-202ENST00000595242 TSR1Q2NL82 804 aaKnown RBP13.6□□□□□ -0.23
SCAF1-202ENST00000595242 TMPRSS7Q7RTY8 843 aa13.6□□□□□ -0.23
SCAF1-202ENST00000595242 CCDC170Q8IYT3 715 aa13.6□□□□□ -0.23
SCAF1-202ENST00000595242 IL17RCQ8NAC3 791 aa13.6□□□□□ -0.23
SCAF1-202ENST00000595242 C2orf15Q8WU43 125 aaKnown RBP13.6□□□□□ -0.23
SCAF1-202ENST00000595242 BAP1Q92560 729 aa13.6□□□□□ -0.23
SCAF1-202ENST00000595242 KCNN1Q92952 543 aa13.6□□□□□ -0.23
SCAF1-202ENST00000595242 HVCN1Q96D96 273 aa13.6□□□□□ -0.23
SCAF1-202ENST00000595242 DRC1Q96MC2 740 aa13.6□□□□□ -0.23
SCAF1-202ENST00000595242 SLC22A12Q96S37 553 aa13.6□□□□□ -0.23
SCAF1-202ENST00000595242 DESI2Q9BSY9 194 aa13.6□□□□□ -0.23
SCAF1-202ENST00000595242 NUCKS1Q9H1E3 243 aaKnown RBP13.6□□□□□ -0.23
SCAF1-202ENST00000595242 PLEKHA5Q9HAU0 1116 aa13.6□□□□□ -0.23
SCAF1-202ENST00000595242 DMAC2Q9NW81 257 aa13.6□□□□□ -0.23
SCAF1-202ENST00000595242 KIAA1522Q9P206 1035 aaPredicted RBP13.6□□□□□ -0.23
SCAF1-202ENST00000595242 CGNQ9P2M7 1197 aaKnown RBP13.6□□□□□ -0.23
SCAF1-202ENST00000595242 UBQLN1Q9UMX0 589 aaKnown RBP13.6□□□□□ -0.23
SCAF1-202ENST00000595242 MUC22E2RYF6 1773 aaPredicted RBP13.6□□□□□ -0.23
SCAF1-202ENST00000595242 ATMQ13315 3056 aa13.6□□□□□ -0.23
SCAF1-202ENST00000595242 HECTD1Q9ULT8 2610 aa13.6□□□□□ -0.23
SCAF1-202ENST00000595242 COL6A6A6NMZ7 2263 aa13.59□□□□□ -0.23
SCAF1-202ENST00000595242 GTPBP10A4D1E9 387 aaKnown RBP13.59□□□□□ -0.23
SCAF1-202ENST00000595242 TRABD2BA6NFA1 517 aa13.59□□□□□ -0.23
SCAF1-202ENST00000595242 PPEF2O14830 753 aa13.59□□□□□ -0.23
SCAF1-202ENST00000595242 PLS3P13797 630 aa13.59□□□□□ -0.23
SCAF1-202ENST00000595242 TIE1P35590 1138 aa13.59□□□□□ -0.23
SCAF1-202ENST00000595242 GUCY2FP51841 1108 aa13.59□□□□□ -0.23
SCAF1-202ENST00000595242 NCKAP1LP55160 1127 aa13.59□□□□□ -0.23
SCAF1-202ENST00000595242 EOGTQ5NDL2 527 aa13.59□□□□□ -0.23
SCAF1-202ENST00000595242 SYT10Q6XYQ8 523 aa13.59□□□□□ -0.23
SCAF1-202ENST00000595242 GLRX5Q86SX6 157 aa13.59□□□□□ -0.23
SCAF1-202ENST00000595242 LRRTM3Q86VH5 581 aa13.59□□□□□ -0.23
SCAF1-202ENST00000595242 STKLD1Q8NE28 680 aa13.59□□□□□ -0.23
SCAF1-202ENST00000595242 PIP4K2CQ8TBX8 421 aa13.59□□□□□ -0.23
SCAF1-202ENST00000595242 SPPL2BQ8TCT7 592 aa13.59□□□□□ -0.23
SCAF1-202ENST00000595242 SYN2Q92777 582 aaPredicted RBP13.59□□□□□ -0.23
SCAF1-202ENST00000595242 CHP1Q99653 195 aa13.59□□□□□ -0.23
SCAF1-202ENST00000595242 TRPC7Q9HCX4 862 aa13.59□□□□□ -0.23
SCAF1-202ENST00000595242 PLCB1Q9NQ66 1216 aa13.59□□□□□ -0.23
SCAF1-202ENST00000595242 KMT5AQ9NQR1 393 aa13.59□□□□□ -0.23
SCAF1-202ENST00000595242 ZNHIT6Q9NWK9 470 aaKnown RBP13.59□□□□□ -0.23
SCAF1-202ENST00000595242 ABI2Q9NYB9 513 aaPredicted RBP13.59□□□□□ -0.23
SCAF1-202ENST00000595242 ARHGAP28Q9P2N2 729 aa13.59□□□□□ -0.23
SCAF1-202ENST00000595242 ARMCX3Q9UH62 379 aaPredicted RBP13.59□□□□□ -0.23
SCAF1-202ENST00000595242 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.59□□□□□ -0.23
SCAF1-202ENST00000595242 EPN1Q9Y6I3 576 aaPredicted RBP13.59□□□□□ -0.23
SCAF1-202ENST00000595242 MYH10P35580 1976 aa13.59□□□□□ -0.23
SCAF1-202ENST00000595242 TMEM131Q92545 1883 aa13.59□□□□□ -0.23
SCAF1-202ENST00000595242 MGAQ8IWI9 3026 aa13.58□□□□□ -0.24
SCAF1-202ENST00000595242 TRAV19A0A0A6YYK7 116 aa13.58□□□□□ -0.24
SCAF1-202ENST00000595242 TCRBV21S2A2A0A5A6 115 aa13.58□□□□□ -0.24
SCAF1-202ENST00000595242 SFI1A8K8P3 1242 aa13.58□□□□□ -0.24
SCAF1-202ENST00000595242 EIF3CLB5ME19 914 aaKnown RBP13.58□□□□□ -0.24
SCAF1-202ENST00000595242 EPHB6O15197 1021 aa13.58□□□□□ -0.24
SCAF1-202ENST00000595242 FANCGO15287 622 aa13.58□□□□□ -0.24
SCAF1-202ENST00000595242 CBFA2T3O75081 653 aa13.58□□□□□ -0.24
SCAF1-202ENST00000595242 TOM1L1O75674 476 aa13.58□□□□□ -0.24
SCAF1-202ENST00000595242 NFATC1O95644 943 aa13.58□□□□□ -0.24
SCAF1-202ENST00000595242 CKMP06732 381 aa13.58□□□□□ -0.24
SCAF1-202ENST00000595242 USP17L7P0C7H9 530 aa13.58□□□□□ -0.24
SCAF1-202ENST00000595242 EPB41P11171 864 aaKnown RBP13.58□□□□□ -0.24
SCAF1-202ENST00000595242 CYLC1P35663 651 aaPredicted RBP13.58□□□□□ -0.24
SCAF1-202ENST00000595242 ABCG1P45844 678 aa13.58□□□□□ -0.24
SCAF1-202ENST00000595242 GTF2BQ00403 316 aa13.58□□□□□ -0.24
SCAF1-202ENST00000595242 KCNA1Q09470 495 aa13.58□□□□□ -0.24
SCAF1-202ENST00000595242 SMARCB1Q12824 385 aa13.58□□□□□ -0.24
SCAF1-202ENST00000595242 USP4Q13107 963 aa13.58□□□□□ -0.24
SCAF1-202ENST00000595242 GAB4Q2WGN9 574 aa13.58□□□□□ -0.24
SCAF1-202ENST00000595242 PLEKHG6Q3KR16 790 aa13.58□□□□□ -0.24
SCAF1-202ENST00000595242 HSF5Q4G112 596 aaPredicted RBP13.58□□□□□ -0.24
SCAF1-202ENST00000595242 ZC2HC1CQ53FD0 456 aaPredicted RBP13.58□□□□□ -0.24
SCAF1-202ENST00000595242 DPY19L2P1Q6NXN4 242 aa13.58□□□□□ -0.24
SCAF1-202ENST00000595242 SLC36A4Q6YBV0 504 aa13.58□□□□□ -0.24
SCAF1-202ENST00000595242 HS2ST1Q7LGA3 356 aa13.58□□□□□ -0.24
SCAF1-202ENST00000595242 MARCH9Q86YJ5 346 aa13.58□□□□□ -0.24
SCAF1-202ENST00000595242 SFTPA1Q8IWL2 248 aa13.58□□□□□ -0.24
SCAF1-202ENST00000595242 ZNF843Q8N446 348 aa13.58□□□□□ -0.24
SCAF1-202ENST00000595242 NEK11Q8NG66 645 aa13.58□□□□□ -0.24
SCAF1-202ENST00000595242 PCMTD1Q96MG8 357 aaPredicted RBP13.58□□□□□ -0.24
SCAF1-202ENST00000595242 DCBLD2Q96PD2 775 aa13.58□□□□□ -0.24
SCAF1-202ENST00000595242 EIF3CQ99613 913 aaKnown RBP13.58□□□□□ -0.24
SCAF1-202ENST00000595242 TMEM206Q9H813 350 aa13.58□□□□□ -0.24
SCAF1-202ENST00000595242 C17orf75Q9HAS0 396 aa13.58□□□□□ -0.24
SCAF1-202ENST00000595242 AGPAT3Q9NRZ7 376 aa13.58□□□□□ -0.24
SCAF1-202ENST00000595242 MYO1AQ9UBC5 1043 aa13.58□□□□□ -0.24
SCAF1-202ENST00000595242 REXO2Q9Y3B8 237 aaKnown RBP13.58□□□□□ -0.24
SCAF1-202ENST00000595242 MYLKQ15746 1914 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms