RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 SCOCQ9UIL1 159 aa17.12■□□□□ 0.33
LIG1-206ENST00000594067 SSC5DA1L4H1 1573 aa17.12■□□□□ 0.33
LIG1-206ENST00000594067 CCDC195A0A1B0GUA6 201 aa17.12■□□□□ 0.33
LIG1-206ENST00000594067 ANKRD33BA6NCL7 494 aa17.12■□□□□ 0.33
LIG1-206ENST00000594067 SNRPAP09012 282 aaKnown RBP17.12■□□□□ 0.33
LIG1-206ENST00000594067 OSBPP22059 807 aa17.12■□□□□ 0.33
LIG1-206ENST00000594067 CPA2P48052 419 aa17.12■□□□□ 0.33
LIG1-206ENST00000594067 BCAR1P56945 870 aa17.12■□□□□ 0.33
LIG1-206ENST00000594067 ROR2Q01974 943 aaKnown RBP17.12■□□□□ 0.33
LIG1-206ENST00000594067 AP1B1Q10567 949 aa17.12■□□□□ 0.33
LIG1-206ENST00000594067 RBBP5Q15291 538 aaKnown RBP17.12■□□□□ 0.33
LIG1-206ENST00000594067 CCDC14Q49A88 953 aa17.12■□□□□ 0.33
LIG1-206ENST00000594067 NOL9Q5SY16 702 aaKnown RBP17.12■□□□□ 0.33
LIG1-206ENST00000594067 CCDC62Q6P9F0 684 aa17.12■□□□□ 0.33
LIG1-206ENST00000594067 PLPPR4Q7Z2D5 763 aa17.12■□□□□ 0.33
LIG1-206ENST00000594067 MFN1Q8IWA4 741 aa17.12■□□□□ 0.33
LIG1-206ENST00000594067 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.12■□□□□ 0.33
LIG1-206ENST00000594067 CCDC110Q8TBZ0 833 aa17.12■□□□□ 0.33
LIG1-206ENST00000594067 GATA6Q92908 595 aa17.12■□□□□ 0.33
LIG1-206ENST00000594067 NMUR2Q9GZQ4 415 aa17.12■□□□□ 0.33
LIG1-206ENST00000594067 ZNF395Q9H8N7 513 aaPredicted RBP17.12■□□□□ 0.33
LIG1-206ENST00000594067 ETNK2Q9NVF9 386 aa17.12■□□□□ 0.33
LIG1-206ENST00000594067 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.12■□□□□ 0.33
LIG1-206ENST00000594067 SOCS7O14512 581 aa17.11■□□□□ 0.33
LIG1-206ENST00000594067 APOL1O14791 398 aa17.11■□□□□ 0.33
LIG1-206ENST00000594067 KRT37O76014 449 aa17.11■□□□□ 0.33
LIG1-206ENST00000594067 FOXB2Q5VYV0 432 aa17.11■□□□□ 0.33
LIG1-206ENST00000594067 MAP7D3Q8IWC1 876 aa17.11■□□□□ 0.33
LIG1-206ENST00000594067 EXOC8Q8IYI6 725 aa17.11■□□□□ 0.33
LIG1-206ENST00000594067 CYP3A43Q9HB55 503 aa17.11■□□□□ 0.33
LIG1-206ENST00000594067 ARHGEF4Q9NR80 690 aa17.11■□□□□ 0.33
LIG1-206ENST00000594067 KRT82Q9NSB4 513 aa17.11■□□□□ 0.33
LIG1-206ENST00000594067 CYB561D2O14569 222 aa17.11■□□□□ 0.33
LIG1-206ENST00000594067 VGLL4Q14135 290 aa17.11■□□□□ 0.33
LIG1-206ENST00000594067 GADL1Q6ZQY3 521 aa17.11■□□□□ 0.33
LIG1-206ENST00000594067 FBXO16Q8IX29 292 aaPredicted RBP17.11■□□□□ 0.33
LIG1-206ENST00000594067 KBTBD2Q8IY47 623 aa17.11■□□□□ 0.33
LIG1-206ENST00000594067 CCDC33Q8N5R6 958 aa17.11■□□□□ 0.33
LIG1-206ENST00000594067 PCDH19Q8TAB3 1148 aa17.11■□□□□ 0.33
LIG1-206ENST00000594067 PCDH18Q9HCL0 1135 aa17.11■□□□□ 0.33
LIG1-206ENST00000594067 ZNF212Q9UDV6 495 aa17.11■□□□□ 0.33
LIG1-206ENST00000594067 BARX2Q9UMQ3 279 aaPredicted RBP17.11■□□□□ 0.33
LIG1-206ENST00000594067 PLLPQ9Y342 182 aa17.11■□□□□ 0.33
LIG1-206ENST00000594067 ANK1P16157 1881 aa17.1■□□□□ 0.33
LIG1-206ENST00000594067 USP2O75604 605 aaPredicted RBP17.1■□□□□ 0.33
LIG1-206ENST00000594067 RAB27AP51159 221 aa17.1■□□□□ 0.33
LIG1-206ENST00000594067 MRPS5P82675 430 aaKnown RBP17.1■□□□□ 0.33
LIG1-206ENST00000594067 TMPRSS15P98073 1019 aa17.1■□□□□ 0.33
LIG1-206ENST00000594067 BST1Q10588 318 aa17.1■□□□□ 0.33
LIG1-206ENST00000594067 THOC5Q13769 683 aaKnown RBP17.1■□□□□ 0.33
LIG1-206ENST00000594067 SLC10A6Q3KNW5 377 aa17.1■□□□□ 0.33
LIG1-206ENST00000594067 CES4AQ5XG92 561 aa17.1■□□□□ 0.33
LIG1-206ENST00000594067 FAM172AQ8WUF8 416 aa17.1■□□□□ 0.33
LIG1-206ENST00000594067 STMN2Q93045 179 aa17.1■□□□□ 0.33
LIG1-206ENST00000594067 KLC2Q9H0B6 622 aa17.1■□□□□ 0.33
LIG1-206ENST00000594067 IFT122Q9HBG6 1241 aa17.1■□□□□ 0.33
LIG1-206ENST00000594067 WASF2Q9Y6W5 498 aa17.1■□□□□ 0.33
LIG1-206ENST00000594067 LOC285556D6RIA3 1793 aa17.1■□□□□ 0.33
LIG1-206ENST00000594067 FZD9O00144 591 aa17.1■□□□□ 0.33
LIG1-206ENST00000594067 RFPL1O75677 317 aa17.1■□□□□ 0.33
LIG1-206ENST00000594067 AP1G2O75843 785 aa17.1■□□□□ 0.33
LIG1-206ENST00000594067 PFKMP08237 780 aa17.1■□□□□ 0.33
LIG1-206ENST00000594067 CSH1P0DML2 217 aa17.1■□□□□ 0.33
LIG1-206ENST00000594067 CSH2P0DML3 217 aa17.1■□□□□ 0.33
LIG1-206ENST00000594067 P4HA1P13674 534 aa17.1■□□□□ 0.33
LIG1-206ENST00000594067 AMPD1P23109 780 aa17.1■□□□□ 0.33
LIG1-206ENST00000594067 ATICP31939 592 aa17.1■□□□□ 0.33
LIG1-206ENST00000594067 GOLGA7BQ2TAP0 167 aa17.1■□□□□ 0.33
LIG1-206ENST00000594067 PPP6R3Q5H9R7 873 aaPredicted RBP17.1■□□□□ 0.33
LIG1-206ENST00000594067 MDH1BQ5I0G3 518 aa17.1■□□□□ 0.33
LIG1-206ENST00000594067 FAM91A1Q658Y4 838 aa17.1■□□□□ 0.33
LIG1-206ENST00000594067 PDCD7Q8N8D1 485 aaKnown RBP17.1■□□□□ 0.33
LIG1-206ENST00000594067 PPFIBP2Q8ND30 876 aa17.1■□□□□ 0.33
LIG1-206ENST00000594067 ZFAND2BQ8WV99 257 aa17.1■□□□□ 0.33
LIG1-206ENST00000594067 RNPEPQ9H4A4 650 aa17.1■□□□□ 0.33
LIG1-206ENST00000594067 MAD1L1Q9Y6D9 718 aa17.1■□□□□ 0.33
LIG1-206ENST00000594067 A0A087WZ62 844 aa17.09■□□□□ 0.33
LIG1-206ENST00000594067 I3L4J1 428 aa17.09■□□□□ 0.33
LIG1-206ENST00000594067 GSTA2P09210 222 aa17.09■□□□□ 0.33
LIG1-206ENST00000594067 KITP10721 976 aa17.09■□□□□ 0.33
LIG1-206ENST00000594067 PGM1P36871 562 aa17.09■□□□□ 0.33
LIG1-206ENST00000594067 HSF5Q4G112 596 aaPredicted RBP17.09■□□□□ 0.33
LIG1-206ENST00000594067 TRMT10BQ6PF06 316 aaKnown RBP17.09■□□□□ 0.33
LIG1-206ENST00000594067 ILDR2Q71H61 639 aa17.09■□□□□ 0.33
LIG1-206ENST00000594067 ARID3BQ8IVW6 561 aaPredicted RBP17.09■□□□□ 0.33
LIG1-206ENST00000594067 RTP4Q96DX8 246 aa17.09■□□□□ 0.33
LIG1-206ENST00000594067 FGD4Q96M96 766 aa17.09■□□□□ 0.33
LIG1-206ENST00000594067 FDXACB1Q9BRP7 624 aaPredicted RBP17.09■□□□□ 0.33
LIG1-206ENST00000594067 SNRNP25Q9BV90 132 aaKnown RBP17.09■□□□□ 0.33
LIG1-206ENST00000594067 GBA2Q9HCG7 927 aaPredicted RBP17.09■□□□□ 0.33
LIG1-206ENST00000594067 PRMT7Q9NVM4 692 aaPredicted RBP17.09■□□□□ 0.33
LIG1-206ENST00000594067 MARCOQ9UEW3 520 aaPredicted RBP17.09■□□□□ 0.33
LIG1-206ENST00000594067 KAT6AQ92794 2004 aa17.09■□□□□ 0.33
LIG1-206ENST00000594067 SLC15A5A6NIM6 579 aa17.09■□□□□ 0.33
LIG1-206ENST00000594067 A8MXQ7 604 aa17.09■□□□□ 0.33
LIG1-206ENST00000594067 KLF11O14901 512 aa17.09■□□□□ 0.33
LIG1-206ENST00000594067 IL1BP01584 269 aa17.09■□□□□ 0.33
LIG1-206ENST00000594067 TGM2P21980 687 aa17.09■□□□□ 0.33
LIG1-206ENST00000594067 PRKCHP24723 683 aa17.09■□□□□ 0.33
LIG1-206ENST00000594067 RAP1GDS1P52306 607 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms