RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 BMPR1AP36894 532 aa21.66■■□□□ 1.06
PNKP-203ENST00000593946 CREMQ03060 361 aa21.66■■□□□ 1.06
PNKP-203ENST00000593946 DEUP1Q05D60 604 aa21.66■■□□□ 1.06
PNKP-203ENST00000593946 FAM131BQ86XD5 332 aa21.66■■□□□ 1.06
PNKP-203ENST00000593946 C12orf50Q8NA57 414 aaPredicted RBP21.66■■□□□ 1.06
PNKP-203ENST00000593946 NMUR1Q9HB89 426 aa21.66■■□□□ 1.06
PNKP-203ENST00000593946 RXFP1Q9HBX9 757 aa21.66■■□□□ 1.06
PNKP-203ENST00000593946 SSX2IPQ9Y2D8 614 aa21.66■■□□□ 1.06
PNKP-203ENST00000593946 CHD7Q9P2D1 2997 aa21.66■■□□□ 1.06
PNKP-203ENST00000593946 SEC24AO95486 1093 aa21.66■■□□□ 1.06
PNKP-203ENST00000593946 YWHAQP27348 245 aa21.66■■□□□ 1.06
PNKP-203ENST00000593946 CDH6P55285 790 aa21.66■■□□□ 1.06
PNKP-203ENST00000593946 ADCY2Q08462 1091 aa21.66■■□□□ 1.06
PNKP-203ENST00000593946 PDK2Q15119 407 aa21.66■■□□□ 1.06
PNKP-203ENST00000593946 ZC3H12AQ5D1E8 599 aaKnown RBP21.66■■□□□ 1.06
PNKP-203ENST00000593946 C9orf50Q5SZB4 431 aa21.66■■□□□ 1.06
PNKP-203ENST00000593946 COL13A1Q5TAT6 717 aaPredicted RBP21.66■■□□□ 1.06
PNKP-203ENST00000593946 VSIG1Q86XK7 387 aa21.66■■□□□ 1.06
PNKP-203ENST00000593946 CCDC185Q8N715 623 aa21.66■■□□□ 1.06
PNKP-203ENST00000593946 ADAM32Q8TC27 787 aa21.66■■□□□ 1.06
PNKP-203ENST00000593946 FAM71BQ8TC56 605 aa21.66■■□□□ 1.06
PNKP-203ENST00000593946 PNKPQ96T60 521 aa21.66■■□□□ 1.06
PNKP-203ENST00000593946 WDR6Q9NNW5 1121 aaKnown RBP21.66■■□□□ 1.06
PNKP-203ENST00000593946 GPATCH2LQ9NWQ4 482 aa21.66■■□□□ 1.06
PNKP-203ENST00000593946 A0A1W2PQH9 124 aa21.65■■□□□ 1.06
PNKP-203ENST00000593946 LINC01553A4QN01 128 aa21.65■■□□□ 1.06
PNKP-203ENST00000593946 TJP3O95049 919 aa21.65■■□□□ 1.06
PNKP-203ENST00000593946 IGLV3-25P01717 112 aa21.65■■□□□ 1.06
PNKP-203ENST00000593946 CTNNB1P35222 781 aa21.65■■□□□ 1.06
PNKP-203ENST00000593946 NME3Q13232 169 aa21.65■■□□□ 1.06
PNKP-203ENST00000593946 DPYSL3Q14195 570 aa21.65■■□□□ 1.06
PNKP-203ENST00000593946 DPYSL2Q16555 572 aa21.65■■□□□ 1.06
PNKP-203ENST00000593946 BTBD8Q5XKL5 378 aa21.65■■□□□ 1.06
PNKP-203ENST00000593946 KAZNQ674X7 775 aa21.65■■□□□ 1.06
PNKP-203ENST00000593946 ARHGAP18Q8N392 663 aa21.65■■□□□ 1.06
PNKP-203ENST00000593946 DQX1Q8TE96 717 aaKnown RBP21.65■■□□□ 1.06
PNKP-203ENST00000593946 HDAC7Q8WUI4 952 aa21.65■■□□□ 1.06
PNKP-203ENST00000593946 ANKRD7Q92527 254 aa21.65■■□□□ 1.06
PNKP-203ENST00000593946 TTLL2Q9BWV7 592 aa21.65■■□□□ 1.06
PNKP-203ENST00000593946 PARD6BQ9BYG5 372 aa21.65■■□□□ 1.06
PNKP-203ENST00000593946 LRRC19Q9H756 370 aa21.65■■□□□ 1.06
PNKP-203ENST00000593946 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.65■■□□□ 1.06
PNKP-203ENST00000593946 DDIT4Q9NX09 232 aa21.65■■□□□ 1.06
PNKP-203ENST00000593946 AP4E1Q9UPM8 1137 aa21.65■■□□□ 1.06
PNKP-203ENST00000593946 LZTS1Q9Y250 596 aa21.65■■□□□ 1.06
PNKP-203ENST00000593946 RWDD3Q9Y3V2 267 aa21.65■■□□□ 1.06
PNKP-203ENST00000593946 CHD9Q3L8U1 2897 aa21.65■■□□□ 1.06
PNKP-203ENST00000593946 TEX28O15482 410 aa21.64■■□□□ 1.06
PNKP-203ENST00000593946 RAD51CO43502 376 aa21.64■■□□□ 1.06
PNKP-203ENST00000593946 F9P00740 461 aa21.64■■□□□ 1.06
PNKP-203ENST00000593946 CHRNA3P32297 505 aa21.64■■□□□ 1.06
PNKP-203ENST00000593946 MAGEA10P43363 369 aaPredicted RBP21.64■■□□□ 1.06
PNKP-203ENST00000593946 MRPS25P82663 173 aaKnown RBP21.64■■□□□ 1.06
PNKP-203ENST00000593946 MTMR3Q13615 1198 aa21.64■■□□□ 1.06
PNKP-203ENST00000593946 CA9Q16790 459 aa21.64■■□□□ 1.06
PNKP-203ENST00000593946 TAC4Q86UU9 113 aa21.64■■□□□ 1.06
PNKP-203ENST00000593946 PSTKQ8IV42 348 aaKnown RBP21.64■■□□□ 1.06
PNKP-203ENST00000593946 MAP7D3Q8IWC1 876 aa21.64■■□□□ 1.06
PNKP-203ENST00000593946 FBXO32Q969P5 355 aa21.64■■□□□ 1.06
PNKP-203ENST00000593946 MAGOHBQ96A72 148 aaKnown RBP21.64■■□□□ 1.06
PNKP-203ENST00000593946 CALN1Q9BXU9 219 aa21.64■■□□□ 1.06
PNKP-203ENST00000593946 FAM204AQ9H8W3 233 aa21.64■■□□□ 1.06
PNKP-203ENST00000593946 PCDH18Q9HCL0 1135 aa21.64■■□□□ 1.06
PNKP-203ENST00000593946 OSER1Q9NX31 292 aa21.64■■□□□ 1.06
PNKP-203ENST00000593946 GMIPQ9P107 970 aa21.64■■□□□ 1.06
PNKP-203ENST00000593946 DMGDHQ9UI17 866 aaKnown RBP21.64■■□□□ 1.06
PNKP-203ENST00000593946 FZD10Q9ULW2 581 aa21.64■■□□□ 1.06
PNKP-203ENST00000593946 MTCL1Q9Y4B5 1905 aaKnown RBP21.64■■□□□ 1.05
PNKP-203ENST00000593946 SYNJ2BP-COX16A0A087WUM0 186 aa21.63■■□□□ 1.05
PNKP-203ENST00000593946 SLC38A8A6NNN8 435 aa21.63■■□□□ 1.05
PNKP-203ENST00000593946 ZNF487B1APH4 448 aa21.63■■□□□ 1.05
PNKP-203ENST00000593946 EIF4EBP2Q13542 120 aaPredicted RBP21.63■■□□□ 1.05
PNKP-203ENST00000593946 GIPC2Q8TF65 315 aa21.63■■□□□ 1.05
PNKP-203ENST00000593946 SMOC2Q9H3U7 446 aa21.63■■□□□ 1.05
PNKP-203ENST00000593946 COX16Q9P0S2 106 aa21.63■■□□□ 1.05
PNKP-203ENST00000593946 PCYOX1Q9UHG3 505 aa21.63■■□□□ 1.05
PNKP-203ENST00000593946 AMACRQ9UHK6 382 aa21.63■■□□□ 1.05
PNKP-203ENST00000593946 RAB21Q9UL25 225 aa21.63■■□□□ 1.05
PNKP-203ENST00000593946 MAFFQ9ULX9 164 aa21.63■■□□□ 1.05
PNKP-203ENST00000593946 R3HDM2Q9Y2K5 976 aaKnown RBP21.63■■□□□ 1.05
PNKP-203ENST00000593946 NR2E3Q9Y5X4 410 aa21.63■■□□□ 1.05
PNKP-203ENST00000593946 CNPP09543 421 aaKnown RBP21.63■■□□□ 1.05
PNKP-203ENST00000593946 IL4RP24394 825 aa21.63■■□□□ 1.05
PNKP-203ENST00000593946 L1CAMP32004 1257 aa21.63■■□□□ 1.05
PNKP-203ENST00000593946 FNTAP49354 379 aa21.63■■□□□ 1.05
PNKP-203ENST00000593946 CXCR3P49682 368 aa21.63■■□□□ 1.05
PNKP-203ENST00000593946 AIF1P55008 147 aa21.63■■□□□ 1.05
PNKP-203ENST00000593946 SLC7A5Q01650 507 aa21.63■■□□□ 1.05
PNKP-203ENST00000593946 TAF10Q12962 218 aa21.63■■□□□ 1.05
PNKP-203ENST00000593946 KRT81Q14533 505 aa21.63■■□□□ 1.05
PNKP-203ENST00000593946 TTC27Q6P3X3 843 aa21.63■■□□□ 1.05
PNKP-203ENST00000593946 BBS12Q6ZW61 710 aa21.63■■□□□ 1.05
PNKP-203ENST00000593946 CCDC26Q8TAB7 109 aa21.63■■□□□ 1.05
PNKP-203ENST00000593946 RUBCNQ92622 972 aa21.63■■□□□ 1.05
PNKP-203ENST00000593946 NTAN1Q96AB6 310 aa21.63■■□□□ 1.05
PNKP-203ENST00000593946 DCLK3Q9C098 648 aa21.63■■□□□ 1.05
PNKP-203ENST00000593946 CYP4F11Q9HBI6 524 aa21.63■■□□□ 1.05
PNKP-203ENST00000593946 HOMER3Q9NSC5 361 aa21.63■■□□□ 1.05
PNKP-203ENST00000593946 MTMR10Q9NXD2 777 aa21.63■■□□□ 1.05
PNKP-203ENST00000593946 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.63■■□□□ 1.051e-7■■■□□ 14.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms