RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 HFE2Q6ZVN8 426 aa12.42□□□□□ -0.42
NPC1-214ENST00000593280 PCGF5Q86SE9 256 aa12.42□□□□□ -0.42
NPC1-214ENST00000593280 FAM131BQ86XD5 332 aa12.42□□□□□ -0.42
NPC1-214ENST00000593280 PSTKQ8IV42 348 aaKnown RBP12.42□□□□□ -0.42
NPC1-214ENST00000593280 SH2D3CQ8N5H7 860 aa12.42□□□□□ -0.42
NPC1-214ENST00000593280 PLD5Q8N7P1 536 aa12.42□□□□□ -0.42
NPC1-214ENST00000593280 DBF4BQ8NFT6 615 aa12.42□□□□□ -0.42
NPC1-214ENST00000593280 PCDH19Q8TAB3 1148 aa12.42□□□□□ -0.42
NPC1-214ENST00000593280 APBB2Q92870 758 aa12.42□□□□□ -0.42
NPC1-214ENST00000593280 NT5C3BQ969T7 300 aa12.42□□□□□ -0.42
NPC1-214ENST00000593280 KCTD15Q96SI1 283 aaPredicted RBP12.42□□□□□ -0.42
NPC1-214ENST00000593280 TMEM209Q96SK2 561 aa12.42□□□□□ -0.42
NPC1-214ENST00000593280 BEGAINQ9BUH8 593 aa12.42□□□□□ -0.42
NPC1-214ENST00000593280 C10orf88Q9H8K7 445 aa12.42□□□□□ -0.42
NPC1-214ENST00000593280 TMLHEQ9NVH6 421 aa12.42□□□□□ -0.42
NPC1-214ENST00000593280 CALCOCO1Q9P1Z2 691 aa12.42□□□□□ -0.42
NPC1-214ENST00000593280 SHOC2Q9UQ13 582 aa12.42□□□□□ -0.42
NPC1-214ENST00000593280 PCDHB7Q9Y5E2 793 aa12.42□□□□□ -0.42
NPC1-214ENST00000593280 SYNJ2BP-COX16A0A087WUM0 186 aa12.41□□□□□ -0.42
NPC1-214ENST00000593280 YJEFN3A6XGL0 299 aa12.41□□□□□ -0.42
NPC1-214ENST00000593280 E7ENQ6 273 aa12.41□□□□□ -0.42
NPC1-214ENST00000593280 H7C0C1 242 aa12.41□□□□□ -0.42
NPC1-214ENST00000593280 ENPP3O14638 875 aa12.41□□□□□ -0.42
NPC1-214ENST00000593280 TRAPPC3O43617 180 aa12.41□□□□□ -0.42
NPC1-214ENST00000593280 LTFP02788 710 aa12.41□□□□□ -0.42
NPC1-214ENST00000593280 CCL5P13501 91 aa12.41□□□□□ -0.42
NPC1-214ENST00000593280 ZFXP17010 805 aaPredicted RBP12.41□□□□□ -0.42
NPC1-214ENST00000593280 ATP5OP48047 213 aa12.41□□□□□ -0.42
NPC1-214ENST00000593280 LMAN1P49257 510 aa12.41□□□□□ -0.42
NPC1-214ENST00000593280 DEUP1Q05D60 604 aa12.41□□□□□ -0.42
NPC1-214ENST00000593280 MTFR1Q15390 333 aa12.41□□□□□ -0.42
NPC1-214ENST00000593280 GLIPR1L2Q4G1C9 344 aa12.41□□□□□ -0.42
NPC1-214ENST00000593280 RNASEH2BQ5TBB1 312 aaKnown RBP12.41□□□□□ -0.42
NPC1-214ENST00000593280 C4orf50Q6ZRC1 276 aa12.41□□□□□ -0.42
NPC1-214ENST00000593280 BNIPLQ7Z465 357 aa12.41□□□□□ -0.42
NPC1-214ENST00000593280 CROCCP2Q86T23 111 aa12.41□□□□□ -0.42
NPC1-214ENST00000593280 LRRTM3Q86VH5 581 aa12.41□□□□□ -0.42
NPC1-214ENST00000593280 ZC3H18Q86VM9 953 aaKnown RBP12.41□□□□□ -0.42
NPC1-214ENST00000593280 SPATA2LQ8IUW3 424 aaPredicted RBP12.41□□□□□ -0.42
NPC1-214ENST00000593280 UNC45BQ8IWX7 931 aa12.41□□□□□ -0.42
NPC1-214ENST00000593280 FAM71DQ8N9W8 422 aa12.41□□□□□ -0.42
NPC1-214ENST00000593280 SLC7A14Q8TBB6 771 aa12.41□□□□□ -0.42
NPC1-214ENST00000593280 IRGQQ8WZA9 623 aa12.41□□□□□ -0.42
NPC1-214ENST00000593280 RNF208Q9H0X6 261 aa12.41□□□□□ -0.42
NPC1-214ENST00000593280 NRDE2Q9H7Z3 1164 aa12.41□□□□□ -0.42
NPC1-214ENST00000593280 PNPLA8Q9NP80 782 aa12.41□□□□□ -0.42
NPC1-214ENST00000593280 DNAJC17Q9NVM6 304 aaKnown RBP12.41□□□□□ -0.42
NPC1-214ENST00000593280 COX16Q9P0S2 106 aa12.41□□□□□ -0.42
NPC1-214ENST00000593280 OGDHLQ9ULD0 1010 aa12.41□□□□□ -0.42
NPC1-214ENST00000593280 LRFN2Q9ULH4 789 aa12.41□□□□□ -0.42
NPC1-214ENST00000593280 FZD10Q9ULW2 581 aa12.41□□□□□ -0.42
NPC1-214ENST00000593280 NAALADL1Q9UQQ1 740 aa12.41□□□□□ -0.42
NPC1-214ENST00000593280 PRG3Q9Y2Y8 225 aaPredicted RBP12.41□□□□□ -0.42
NPC1-214ENST00000593280 HEY1Q9Y5J3 304 aa12.41□□□□□ -0.42
NPC1-214ENST00000593280 COL4A4P53420 1690 aaPredicted RBP12.41□□□□□ -0.42
NPC1-214ENST00000593280 MYO16Q9Y6X6 1858 aa12.41□□□□□ -0.42
NPC1-214ENST00000593280 CFAP69A5D8W1 941 aa12.4□□□□□ -0.42
NPC1-214ENST00000593280 ACSL3O95573 720 aa12.4□□□□□ -0.42
NPC1-214ENST00000593280 RPL22P35268 128 aaKnown RBP12.4□□□□□ -0.42
NPC1-214ENST00000593280 ARL4AP40617 200 aa12.4□□□□□ -0.42
NPC1-214ENST00000593280 CTCFP49711 727 aaPredicted RBP12.4□□□□□ -0.42
NPC1-214ENST00000593280 PITX1P78337 314 aaPredicted RBP12.4□□□□□ -0.42
NPC1-214ENST00000593280 NME3Q13232 169 aa12.4□□□□□ -0.42
NPC1-214ENST00000593280 SCN5AQ14524 2016 aa12.4□□□□□ -0.42
NPC1-214ENST00000593280 GPNMBQ14956 572 aa12.4□□□□□ -0.42
NPC1-214ENST00000593280 UBAP2Q5T6F2 1119 aaKnown RBP12.4□□□□□ -0.42
NPC1-214ENST00000593280 SYPL2Q5VXT5 272 aa12.4□□□□□ -0.42
NPC1-214ENST00000593280 PWWP2AQ96N64 755 aa12.4□□□□□ -0.42
NPC1-214ENST00000593280 CSPG4P5Q96PW8 444 aa12.4□□□□□ -0.42
NPC1-214ENST00000593280 MTMR10Q9NXD2 777 aa12.4□□□□□ -0.42
NPC1-214ENST00000593280 RRN3Q9NYV6 651 aa12.4□□□□□ -0.42
NPC1-214ENST00000593280 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.4□□□□□ -0.42
NPC1-214ENST00000593280 BCCIPQ9P287 314 aaKnown RBP eCLIP12.4□□□□□ -0.42
NPC1-214ENST00000593280 RCOR3Q9P2K3 495 aaPredicted RBP12.4□□□□□ -0.42
NPC1-214ENST00000593280 DNAJB4Q9UDY4 337 aa12.4□□□□□ -0.42
NPC1-214ENST00000593280 H3BRJ5 948 aa12.4□□□□□ -0.42
NPC1-214ENST00000593280 TADA2AO75478 443 aa12.4□□□□□ -0.42
NPC1-214ENST00000593280 TTC4O95801 387 aa12.4□□□□□ -0.42
NPC1-214ENST00000593280 FYNP06241 537 aa12.4□□□□□ -0.42
NPC1-214ENST00000593280 NCAM1P13591 858 aa12.4□□□□□ -0.42
NPC1-214ENST00000593280 NR1D1P20393 614 aa12.4□□□□□ -0.42
NPC1-214ENST00000593280 STIP1P31948 543 aaKnown RBP12.4□□□□□ -0.42
NPC1-214ENST00000593280 AIF1P55008 147 aa12.4□□□□□ -0.42
NPC1-214ENST00000593280 DNAJC21Q5F1R6 531 aaKnown RBP12.4□□□□□ -0.42
NPC1-214ENST00000593280 EFHC2Q5JST6 749 aa12.4□□□□□ -0.42
NPC1-214ENST00000593280 KDM7AQ6ZMT4 941 aa12.4□□□□□ -0.42
NPC1-214ENST00000593280 ZNF771Q7L3S4 317 aaPredicted RBP12.4□□□□□ -0.42
NPC1-214ENST00000593280 RELL1Q8IUW5 271 aa12.4□□□□□ -0.42
NPC1-214ENST00000593280 CDKL3Q8IVW4 592 aaPredicted RBP12.4□□□□□ -0.42
NPC1-214ENST00000593280 PPIL6Q8IXY8 311 aa12.4□□□□□ -0.42
NPC1-214ENST00000593280 DCP1BQ8IZD4 617 aaKnown RBP12.4□□□□□ -0.42
NPC1-214ENST00000593280 SCML4Q8N228 414 aa12.4□□□□□ -0.42
NPC1-214ENST00000593280 UHMK1Q8TAS1 419 aaKnown RBP12.4□□□□□ -0.42
NPC1-214ENST00000593280 PRCCQ92733 491 aaPredicted RBP12.4□□□□□ -0.42
NPC1-214ENST00000593280 RBM15Q96T37 977 aaKnown RBP eCLIP12.4□□□□□ -0.42
NPC1-214ENST00000593280 TMEM109Q9BVC6 243 aa12.4□□□□□ -0.42
NPC1-214ENST00000593280 TRIM62Q9BVG3 475 aa12.4□□□□□ -0.42
NPC1-214ENST00000593280 PRDM16Q9HAZ2 1276 aa12.4□□□□□ -0.42
NPC1-214ENST00000593280 PIGVQ9NUD9 493 aa12.4□□□□□ -0.42
NPC1-214ENST00000593280 NINJ2Q9NZG7 142 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms