RNA–Protein interactions for RNA: ENST00000591548.5

TUBD1-211, Transcript of tubulin delta 1, humanhuman

TSL 1 (best)

Gene TUBD1, Length 1,577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-211ENST00000591548 ARHGEF15O94989 841 aa11.86□□□□□ -0.51
TUBD1-211ENST00000591548 CTSAP10619 480 aa11.86□□□□□ -0.51
TUBD1-211ENST00000591548 IL4RP24394 825 aa11.86□□□□□ -0.51
TUBD1-211ENST00000591548 RDXP35241 583 aaKnown RBP11.86□□□□□ -0.51
TUBD1-211ENST00000591548 CETN2P41208 172 aa11.86□□□□□ -0.51
TUBD1-211ENST00000591548 TUFMP49411 452 aaKnown RBP11.86□□□□□ -0.51
TUBD1-211ENST00000591548 CDH6P55285 790 aa11.86□□□□□ -0.51
TUBD1-211ENST00000591548 SLC7A5Q01650 507 aa11.86□□□□□ -0.51
TUBD1-211ENST00000591548 DEUP1Q05D60 604 aa11.86□□□□□ -0.51
TUBD1-211ENST00000591548 NME3Q13232 169 aa11.86□□□□□ -0.51
TUBD1-211ENST00000591548 PPP2R5EQ16537 467 aa11.86□□□□□ -0.51
TUBD1-211ENST00000591548 GLE1Q53GS7 698 aaKnown RBP11.86□□□□□ -0.51
TUBD1-211ENST00000591548 ODF2Q5BJF6 829 aa11.86□□□□□ -0.51
TUBD1-211ENST00000591548 KAZNQ674X7 775 aa11.86□□□□□ -0.51
TUBD1-211ENST00000591548 FAM109BQ6ICB4 259 aaPredicted RBP11.86□□□□□ -0.51
TUBD1-211ENST00000591548 C8orf74Q6P047 294 aa11.86□□□□□ -0.51
TUBD1-211ENST00000591548 TTC27Q6P3X3 843 aa11.86□□□□□ -0.51
TUBD1-211ENST00000591548 SPRED2Q7Z698 418 aa11.86□□□□□ -0.51
TUBD1-211ENST00000591548 MON1AQ86VX9 555 aa11.86□□□□□ -0.51
TUBD1-211ENST00000591548 FAM71BQ8TC56 605 aa11.86□□□□□ -0.51
TUBD1-211ENST00000591548 GIPC2Q8TF65 315 aa11.86□□□□□ -0.51
TUBD1-211ENST00000591548 HINFPQ9BQA5 517 aa11.86□□□□□ -0.51
TUBD1-211ENST00000591548 RXFP1Q9HBX9 757 aa11.86□□□□□ -0.51
TUBD1-211ENST00000591548 WDR6Q9NNW5 1121 aaKnown RBP11.86□□□□□ -0.51
TUBD1-211ENST00000591548 ABCC13Q9NSE7 274 aa11.86□□□□□ -0.51
TUBD1-211ENST00000591548 RRN3Q9NYV6 651 aa11.86□□□□□ -0.51
TUBD1-211ENST00000591548 COX16Q9P0S2 106 aa11.86□□□□□ -0.51
TUBD1-211ENST00000591548 FNIP2Q9P278 1114 aa11.86□□□□□ -0.51
TUBD1-211ENST00000591548 HSFX1Q9UBD0 423 aa11.86□□□□□ -0.51
TUBD1-211ENST00000591548 STK39Q9UEW8 545 aa11.86□□□□□ -0.51
TUBD1-211ENST00000591548 AMACRQ9UHK6 382 aa11.86□□□□□ -0.51
TUBD1-211ENST00000591548 MTUS1Q9ULD2 1270 aa11.86□□□□□ -0.51
TUBD1-211ENST00000591548 PLXNA4Q9HCM2 1894 aa11.86□□□□□ -0.51
TUBD1-211ENST00000591548 PLXNA3P51805 1871 aa11.85□□□□□ -0.51
TUBD1-211ENST00000591548 TARSL2A2RTX5 802 aaKnown RBP11.85□□□□□ -0.51
TUBD1-211ENST00000591548 LINC01553A4QN01 128 aa11.85□□□□□ -0.51
TUBD1-211ENST00000591548 CCDC85CA6NKD9 419 aa11.85□□□□□ -0.51
TUBD1-211ENST00000591548 SLC38A8A6NNN8 435 aa11.85□□□□□ -0.51
TUBD1-211ENST00000591548 GRXCR1A8MXD5 290 aa11.85□□□□□ -0.51
TUBD1-211ENST00000591548 I6L893 689 aaPredicted RBP11.85□□□□□ -0.51
TUBD1-211ENST00000591548 RTN3O95197 1032 aaPredicted RBP11.85□□□□□ -0.51
TUBD1-211ENST00000591548 IGLV3-25P01717 112 aa11.85□□□□□ -0.51
TUBD1-211ENST00000591548 MYOGP15173 224 aa11.85□□□□□ -0.51
TUBD1-211ENST00000591548 YWHAQP27348 245 aa11.85□□□□□ -0.51
TUBD1-211ENST00000591548 L1CAMP32004 1257 aa11.85□□□□□ -0.51
TUBD1-211ENST00000591548 MAGEA10P43363 369 aaPredicted RBP11.85□□□□□ -0.51
TUBD1-211ENST00000591548 MMRN1Q13201 1228 aa11.85□□□□□ -0.51
TUBD1-211ENST00000591548 EIF4EBP2Q13542 120 aaPredicted RBP11.85□□□□□ -0.51
TUBD1-211ENST00000591548 DPYSL3Q14195 570 aa11.85□□□□□ -0.51
TUBD1-211ENST00000591548 KCTD19Q17RG1 926 aaPredicted RBP11.85□□□□□ -0.51
TUBD1-211ENST00000591548 BTBD8Q5XKL5 378 aa11.85□□□□□ -0.51
TUBD1-211ENST00000591548 TAC4Q86UU9 113 aa11.85□□□□□ -0.51
TUBD1-211ENST00000591548 C12orf50Q8NA57 414 aaPredicted RBP11.85□□□□□ -0.51
TUBD1-211ENST00000591548 DQX1Q8TE96 717 aaKnown RBP11.85□□□□□ -0.51
TUBD1-211ENST00000591548 MAIP1Q8WWC4 291 aa11.85□□□□□ -0.51
TUBD1-211ENST00000591548 C1orf54Q8WWF1 131 aa11.85□□□□□ -0.51
TUBD1-211ENST00000591548 ATG4AQ8WYN0 398 aa11.85□□□□□ -0.51
TUBD1-211ENST00000591548 ANKRD7Q92527 254 aa11.85□□□□□ -0.51
TUBD1-211ENST00000591548 MAGOHBQ96A72 148 aaKnown RBP11.85□□□□□ -0.51
TUBD1-211ENST00000591548 C17orf80Q9BSJ5 609 aa11.85□□□□□ -0.51
TUBD1-211ENST00000591548 TRIM62Q9BVG3 475 aa11.85□□□□□ -0.51
TUBD1-211ENST00000591548 CALN1Q9BXU9 219 aa11.85□□□□□ -0.51
TUBD1-211ENST00000591548 PLEKHA4Q9H4M7 779 aa11.85□□□□□ -0.51
TUBD1-211ENST00000591548 SLITRK6Q9H5Y7 841 aa11.85□□□□□ -0.51
TUBD1-211ENST00000591548 LRRC19Q9H756 370 aa11.85□□□□□ -0.51
TUBD1-211ENST00000591548 CYP4F11Q9HBI6 524 aa11.85□□□□□ -0.51
TUBD1-211ENST00000591548 PCDH18Q9HCL0 1135 aa11.85□□□□□ -0.51
TUBD1-211ENST00000591548 ALG13Q9NP73 1137 aaKnown RBP11.85□□□□□ -0.51
TUBD1-211ENST00000591548 ANLNQ9NQW6 1124 aa11.85□□□□□ -0.51
TUBD1-211ENST00000591548 TMPRSS4Q9NRS4 437 aa11.85□□□□□ -0.51
TUBD1-211ENST00000591548 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.85□□□□□ -0.51
TUBD1-211ENST00000591548 DDIT4Q9NX09 232 aa11.85□□□□□ -0.51
TUBD1-211ENST00000591548 MTMR10Q9NXD2 777 aa11.85□□□□□ -0.51
TUBD1-211ENST00000591548 GMIPQ9P107 970 aa11.85□□□□□ -0.51
TUBD1-211ENST00000591548 FZD10Q9ULW2 581 aa11.85□□□□□ -0.51
TUBD1-211ENST00000591548 AP4E1Q9UPM8 1137 aa11.85□□□□□ -0.51
TUBD1-211ENST00000591548 EFR3BQ9Y2G0 817 aa11.85□□□□□ -0.51
TUBD1-211ENST00000591548 GREB1Q4ZG55 1949 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 CHD9Q3L8U1 2897 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 ZMYND10O75800 440 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 TJP3O95049 919 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 F9P00740 461 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 CNPP09543 421 aaKnown RBP11.84□□□□□ -0.51
TUBD1-211ENST00000591548 CHRNA3P32297 505 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 CTNNB1P35222 781 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 COILP38432 576 aaPredicted RBP11.84□□□□□ -0.51
TUBD1-211ENST00000591548 CXCR3P49682 368 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 ERVFC1P60507 584 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 TAF10Q12962 218 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 PDK2Q15119 407 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 SHHQ15465 462 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 DPYSL2Q16555 572 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 PYROXD2Q8N2H3 581 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 FBXO32Q969P5 355 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 CEP295NLQ96MC4 621 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 FAM118BQ9BPY3 351 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 TTLL2Q9BWV7 592 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 DCLK3Q9C098 648 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 DHX35Q9H5Z1 703 aaKnown RBP11.84□□□□□ -0.51
TUBD1-211ENST00000591548 FAM204AQ9H8W3 233 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms