RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 PTPRN2Q92932 1015 aa15.08■□□□□ 0.01
RETREG3-208ENST00000589797 MAML3Q96JK9 1138 aa15.08■□□□□ 0.01
RETREG3-208ENST00000589797 RPRD1AQ96P16 312 aaPredicted RBP15.08■□□□□ 0.01
RETREG3-208ENST00000589797 SLC40A1Q9NP59 571 aa15.08■□□□□ 0.01
RETREG3-208ENST00000589797 IPO11Q9UI26 975 aaKnown RBP15.08■□□□□ 0.01
RETREG3-208ENST00000589797 CHD4Q14839 1912 aa15.08■□□□□ 0
RETREG3-208ENST00000589797 WDR27A2RRH5 827 aa15.08■□□□□ 0
RETREG3-208ENST00000589797 NT5C1B-RDH14C9J2C7 533 aa15.08■□□□□ 0
RETREG3-208ENST00000589797 APOC4-APOC2K7ER74 178 aa15.08■□□□□ 0
RETREG3-208ENST00000589797 B4GALT4O60513 344 aa15.08■□□□□ 0
RETREG3-208ENST00000589797 APOC2P02655 101 aa15.08■□□□□ 0
RETREG3-208ENST00000589797 PTPN1P18031 435 aaKnown RBP15.08■□□□□ 0
RETREG3-208ENST00000589797 FLT3LGP49771 235 aa15.08■□□□□ 0
RETREG3-208ENST00000589797 ITPRIPL1Q6GPH6 555 aa15.08■□□□□ 0
RETREG3-208ENST00000589797 CHSY1Q86X52 802 aa15.08■□□□□ 0
RETREG3-208ENST00000589797 AFAP1L2Q8N4X5 818 aa15.08■□□□□ 0
RETREG3-208ENST00000589797 SLC4A11Q8NBS3 891 aa15.08■□□□□ 0
RETREG3-208ENST00000589797 TASP1Q9H6P5 420 aa15.08■□□□□ 0
RETREG3-208ENST00000589797 HEY2Q9UBP5 337 aa15.08■□□□□ 0
RETREG3-208ENST00000589797 NHSL1Q5SYE7 1610 aa15.08■□□□□ 0
RETREG3-208ENST00000589797 POLBP06746 335 aa15.08■□□□□ 0
RETREG3-208ENST00000589797 MX2P20592 715 aa15.08■□□□□ 0
RETREG3-208ENST00000589797 OCRLQ01968 901 aa15.08■□□□□ 0
RETREG3-208ENST00000589797 GBE1Q04446 702 aa15.08■□□□□ 0
RETREG3-208ENST00000589797 ZNF235Q14590 738 aa15.08■□□□□ 0
RETREG3-208ENST00000589797 PDK2Q15119 407 aa15.08■□□□□ 0
RETREG3-208ENST00000589797 RNF180Q86T96 592 aa15.08■□□□□ 0
RETREG3-208ENST00000589797 LMNTD2Q8IXW0 634 aa15.08■□□□□ 0
RETREG3-208ENST00000589797 PPTC7Q8NI37 304 aa15.08■□□□□ 0
RETREG3-208ENST00000589797 GSDMBQ8TAX9 411 aa15.08■□□□□ 0
RETREG3-208ENST00000589797 ART4Q93070 314 aa15.08■□□□□ 0
RETREG3-208ENST00000589797 GPR88Q9GZN0 384 aa15.08■□□□□ 0
RETREG3-208ENST00000589797 CNTRLQ7Z7A1 2325 aa15.08■□□□□ 0
RETREG3-208ENST00000589797 TRAPPC3O43617 180 aa15.07■□□□□ 0
RETREG3-208ENST00000589797 TSPAN1O60635 241 aa15.07■□□□□ 0
RETREG3-208ENST00000589797 HOXC6P09630 235 aa15.07■□□□□ 0
RETREG3-208ENST00000589797 MGAT1P26572 445 aa15.07■□□□□ 0
RETREG3-208ENST00000589797 ZNF143P52747 638 aaPredicted RBP15.07■□□□□ 0
RETREG3-208ENST00000589797 TAF11Q15544 211 aa15.07■□□□□ 0
RETREG3-208ENST00000589797 NBPF20Q3BBV1 942 aa15.07■□□□□ 0
RETREG3-208ENST00000589797 ACCSLQ4AC99 568 aa15.07■□□□□ 0
RETREG3-208ENST00000589797 PYROXD2Q8N2H3 581 aa15.07■□□□□ 0
RETREG3-208ENST00000589797 TBCBQ99426 244 aa15.07■□□□□ 0
RETREG3-208ENST00000589797 STXBP5LQ9Y2K9 1186 aa15.07■□□□□ 0
RETREG3-208ENST00000589797 USH1CQ9Y6N9 552 aa15.07■□□□□ 0
RETREG3-208ENST00000589797 CLGNO14967 610 aa15.07■□□□□ 0
RETREG3-208ENST00000589797 TRUB2O95900 331 aaKnown RBP15.07■□□□□ 0
RETREG3-208ENST00000589797 MT-CO1P00395 513 aa15.07■□□□□ 0
RETREG3-208ENST00000589797 NDUFV1P49821 464 aa15.07■□□□□ 0
RETREG3-208ENST00000589797 ZNF410Q86VK4 478 aa15.07■□□□□ 0
RETREG3-208ENST00000589797 B3GALNT2Q8NCR0 500 aa15.07■□□□□ 0
RETREG3-208ENST00000589797 CDHR5Q9HBB8 845 aa15.07■□□□□ 0
RETREG3-208ENST00000589797 C22orf31O95567 290 aa15.07■□□□□ 0
RETREG3-208ENST00000589797 PDHA1P08559 390 aa15.07■□□□□ 0
RETREG3-208ENST00000589797 ODC1P11926 461 aa15.07■□□□□ 0
RETREG3-208ENST00000589797 HOXD10P28358 340 aa15.07■□□□□ 0
RETREG3-208ENST00000589797 SCTRP47872 440 aa15.07■□□□□ 0
RETREG3-208ENST00000589797 RPL10AP62906 217 aaKnown RBP15.07■□□□□ 0
RETREG3-208ENST00000589797 SNX17Q15036 470 aa15.07■□□□□ 0
RETREG3-208ENST00000589797 ANO4Q32M45 955 aa15.07■□□□□ 0
RETREG3-208ENST00000589797 ILDR2Q71H61 639 aa15.07■□□□□ 0
RETREG3-208ENST00000589797 CTU1Q7Z7A3 348 aaKnown RBP15.07■□□□□ 0
RETREG3-208ENST00000589797 MTDHQ86UE4 582 aaKnown RBP15.07■□□□□ 0
RETREG3-208ENST00000589797 ZC3H15Q8WU90 426 aaKnown RBP15.07■□□□□ 0
RETREG3-208ENST00000589797 SPOCK2Q92563 424 aa15.07■□□□□ 0
RETREG3-208ENST00000589797 RNF103O00237 685 aa15.07■□□□□ 0
RETREG3-208ENST00000589797 DGKIO75912 1065 aa15.07■□□□□ 0
RETREG3-208ENST00000589797 OR4Q2P0C623 313 aa15.07■□□□□ 0
RETREG3-208ENST00000589797 HNRNPH1P31943 449 aaKnown RBP15.07■□□□□ 0
RETREG3-208ENST00000589797 COG7P83436 770 aa15.07■□□□□ 0
RETREG3-208ENST00000589797 HSP90AA5PQ58FG0 334 aa15.07■□□□□ 0
RETREG3-208ENST00000589797 E2F7Q96AV8 911 aa15.07■□□□□ 0
RETREG3-208ENST00000589797 FBXL18Q96ME1 805 aa15.07■□□□□ 0
RETREG3-208ENST00000589797 RNF157Q96PX1 679 aa15.07■□□□□ 0
RETREG3-208ENST00000589797 TMEM237Q96Q45 408 aa15.07■□□□□ 0
RETREG3-208ENST00000589797 PLCH1Q4KWH8 1693 aa15.06■□□□□ 0
RETREG3-208ENST00000589797 TYW5A2RUC4 315 aaKnown RBP15.06■□□□□ 0
RETREG3-208ENST00000589797 PQBP1O60828 265 aaKnown RBP15.06■□□□□ 0
RETREG3-208ENST00000589797 ANKRD22Q5VYY1 191 aa15.06■□□□□ 0
RETREG3-208ENST00000589797 PPWD1Q96BP3 646 aaKnown RBP15.06■□□□□ 0
RETREG3-208ENST00000589797 PGM2Q96G03 612 aa15.06■□□□□ 0
RETREG3-208ENST00000589797 FOXP3Q9BZS1 431 aa15.06■□□□□ 0
RETREG3-208ENST00000589797 TKTL2Q9H0I9 626 aa15.06■□□□□ 0
RETREG3-208ENST00000589797 ZNF112Q9UJU3 913 aa15.06■□□□□ 0
RETREG3-208ENST00000589797 SHOC2Q9UQ13 582 aa15.06■□□□□ 0
RETREG3-208ENST00000589797 CHUKO15111 745 aa15.06■□□□□ 0
RETREG3-208ENST00000589797 BUD23O43709 281 aaKnown RBP15.06■□□□□ 0
RETREG3-208ENST00000589797 CILPO75339 1184 aa15.06■□□□□ 0
RETREG3-208ENST00000589797 KCNA4P22459 653 aa15.06■□□□□ 0
RETREG3-208ENST00000589797 SH2D4BQ5SQS7 431 aa15.06■□□□□ 0
RETREG3-208ENST00000589797 MREGQ8N565 214 aa15.06■□□□□ 0
RETREG3-208ENST00000589797 ZCCHC9Q8N567 271 aaKnown RBP15.06■□□□□ 0
RETREG3-208ENST00000589797 PRDM12Q9H4Q4 367 aa15.06■□□□□ 0
RETREG3-208ENST00000589797 CHST12Q9NRB3 414 aa15.06■□□□□ 0
RETREG3-208ENST00000589797 SMPD4Q9NXE4 827 aa15.06■□□□□ 0
RETREG3-208ENST00000589797 YBX3P16989 372 aaKnown RBP eCLIP15.06■□□□□ 03e-10■■□□□ 12.4
RETREG3-208ENST00000589797 GDF10P55107 478 aa15.06■□□□□ 0
RETREG3-208ENST00000589797 SKOR1P84550 965 aa15.06■□□□□ 0
RETREG3-208ENST00000589797 OGDHQ02218 1023 aa15.06■□□□□ 0
RETREG3-208ENST00000589797 YWHAHQ04917 246 aaPredicted RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms