RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 MRPL10Q7Z7H8 261 aaKnown RBP4.08□□□□□ -1.76
SMAD4-207ENST00000589076 ZDHHC17Q8IUH5 632 aa4.08□□□□□ -1.76
SMAD4-207ENST00000589076 SAMD14Q8IZD0 417 aaPredicted RBP4.08□□□□□ -1.76
SMAD4-207ENST00000589076 SPARTQ8N0X7 666 aa4.08□□□□□ -1.76
SMAD4-207ENST00000589076 FAM109AQ8N4B1 249 aa4.08□□□□□ -1.76
SMAD4-207ENST00000589076 GLIS1Q8NBF1 620 aa4.08□□□□□ -1.76
SMAD4-207ENST00000589076 MUL1Q969V5 352 aa4.08□□□□□ -1.76
SMAD4-207ENST00000589076 VPS33BQ9H267 617 aa4.08□□□□□ -1.76
SMAD4-207ENST00000589076 EBF3Q9H4W6 596 aa4.08□□□□□ -1.76
SMAD4-207ENST00000589076 ZBTB26Q9HCK0 441 aa4.08□□□□□ -1.76
SMAD4-207ENST00000589076 TMEM8AQ9HCN3 771 aa4.08□□□□□ -1.76
SMAD4-207ENST00000589076 RGL1Q9NZL6 768 aa4.08□□□□□ -1.76
SMAD4-207ENST00000589076 MRPS17Q9Y2R5 130 aaKnown RBP4.08□□□□□ -1.76
SMAD4-207ENST00000589076 A0A087WZ62 844 aa4.07□□□□□ -1.76
SMAD4-207ENST00000589076 FAM234BA2RU67 622 aa4.07□□□□□ -1.76
SMAD4-207ENST00000589076 PODXLO00592 558 aa4.07□□□□□ -1.76
SMAD4-207ENST00000589076 COQ9O75208 318 aa4.07□□□□□ -1.76
SMAD4-207ENST00000589076 PIAS2O75928 621 aa4.07□□□□□ -1.76
SMAD4-207ENST00000589076 RASAL1O95294 804 aa4.07□□□□□ -1.76
SMAD4-207ENST00000589076 CSTBP04080 98 aaKnown RBP4.07□□□□□ -1.76
SMAD4-207ENST00000589076 PRKAR1BP31321 381 aa4.07□□□□□ -1.76
SMAD4-207ENST00000589076 RAB30Q15771 203 aa4.07□□□□□ -1.76
SMAD4-207ENST00000589076 PFKFB4Q16877 469 aa4.07□□□□□ -1.76
SMAD4-207ENST00000589076 CCDC38Q502W7 563 aa4.07□□□□□ -1.76
SMAD4-207ENST00000589076 ARHGAP40Q5TG30 622 aa4.07□□□□□ -1.76
SMAD4-207ENST00000589076 CACHD1Q5VU97 1274 aa4.07□□□□□ -1.76
SMAD4-207ENST00000589076 GGT6Q6P531 493 aa4.07□□□□□ -1.76
SMAD4-207ENST00000589076 CCDC174Q6PII3 467 aa4.07□□□□□ -1.76
SMAD4-207ENST00000589076 KCTD20Q7Z5Y7 419 aa4.07□□□□□ -1.76
SMAD4-207ENST00000589076 GALNT16Q8N428 558 aa4.07□□□□□ -1.76
SMAD4-207ENST00000589076 NKAPQ8N5F7 415 aaKnown RBP4.07□□□□□ -1.76
SMAD4-207ENST00000589076 ANKRD42Q8N9B4 389 aa4.07□□□□□ -1.76
SMAD4-207ENST00000589076 SPATA5Q8NB90 893 aa4.07□□□□□ -1.76
SMAD4-207ENST00000589076 NSMCE1Q8WV22 266 aa4.07□□□□□ -1.76
SMAD4-207ENST00000589076 CCT6BQ92526 530 aa4.07□□□□□ -1.76
SMAD4-207ENST00000589076 FAM136AQ96C01 138 aa4.07□□□□□ -1.76
SMAD4-207ENST00000589076 ZNF668Q96K58 619 aaPredicted RBP4.07□□□□□ -1.76
SMAD4-207ENST00000589076 FAM227BQ96M60 508 aa4.07□□□□□ -1.76
SMAD4-207ENST00000589076 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.07□□□□□ -1.76
SMAD4-207ENST00000589076 ZCWPW1Q9H0M4 648 aa4.07□□□□□ -1.76
SMAD4-207ENST00000589076 CXorf36Q9H7Y0 433 aa4.07□□□□□ -1.76
SMAD4-207ENST00000589076 AGO4Q9HCK5 861 aaKnown RBP4.07□□□□□ -1.76
SMAD4-207ENST00000589076 TMOD4Q9NZQ9 345 aa4.07□□□□□ -1.76
SMAD4-207ENST00000589076 ZMYND8Q9ULU4 1186 aaPredicted RBP4.07□□□□□ -1.76
SMAD4-207ENST00000589076 IGKV2D-30A0A075B6S6 120 aa4.06□□□□□ -1.76
SMAD4-207ENST00000589076 CYP2D7A0A087X1C5 515 aa4.06□□□□□ -1.76
SMAD4-207ENST00000589076 TISP43B9A030 160 aa4.06□□□□□ -1.76
SMAD4-207ENST00000589076 SOCS2O14508 198 aa4.06□□□□□ -1.76
SMAD4-207ENST00000589076 NBNO60934 754 aa4.06□□□□□ -1.76
SMAD4-207ENST00000589076 EGR1P18146 543 aa4.06□□□□□ -1.76
SMAD4-207ENST00000589076 ATICP31939 592 aa4.06□□□□□ -1.76
SMAD4-207ENST00000589076 CCKARP32238 428 aa4.06□□□□□ -1.76
SMAD4-207ENST00000589076 CHKAP35790 457 aa4.06□□□□□ -1.76
SMAD4-207ENST00000589076 GRK6P43250 576 aa4.06□□□□□ -1.76
SMAD4-207ENST00000589076 CCNIQ14094 377 aa4.06□□□□□ -1.76
SMAD4-207ENST00000589076 PTK2BQ14289 1009 aa4.06□□□□□ -1.76
SMAD4-207ENST00000589076 SPARCL1Q14515 664 aa4.06□□□□□ -1.76
SMAD4-207ENST00000589076 MAPKAPK3Q16644 382 aa4.06□□□□□ -1.76
SMAD4-207ENST00000589076 PTCHD3Q3KNS1 767 aa4.06□□□□□ -1.76
SMAD4-207ENST00000589076 ZACNQ401N2 412 aa4.06□□□□□ -1.76
SMAD4-207ENST00000589076 CERKLQ49MI3 558 aaPredicted RBP4.06□□□□□ -1.76
SMAD4-207ENST00000589076 MIDNQ504T8 468 aa4.06□□□□□ -1.76
SMAD4-207ENST00000589076 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.06□□□□□ -1.76
SMAD4-207ENST00000589076 PCID2Q5JVF3 399 aa4.06□□□□□ -1.76
SMAD4-207ENST00000589076 FAXCQ5TGI0 409 aa4.06□□□□□ -1.76
SMAD4-207ENST00000589076 VPS53Q5VIR6 699 aa4.06□□□□□ -1.76
SMAD4-207ENST00000589076 MANEALQ5VSG8 457 aa4.06□□□□□ -1.76
SMAD4-207ENST00000589076 RGS7BPQ6MZT1 257 aaPredicted RBP4.06□□□□□ -1.76
SMAD4-207ENST00000589076 MRNIPQ6NTE8 343 aa4.06□□□□□ -1.76
SMAD4-207ENST00000589076 TLDC1Q6P9B6 456 aa4.06□□□□□ -1.76
SMAD4-207ENST00000589076 CRTC1Q6UUV9 634 aa4.06□□□□□ -1.76
SMAD4-207ENST00000589076 DTX2Q86UW9 622 aa4.06□□□□□ -1.76
SMAD4-207ENST00000589076 SLC15A3Q8IY34 581 aa4.06□□□□□ -1.76
SMAD4-207ENST00000589076 NANOGP1Q8N7R0 232 aa4.06□□□□□ -1.76
SMAD4-207ENST00000589076 PNLDC1Q8NA58 520 aaKnown RBP4.06□□□□□ -1.76
SMAD4-207ENST00000589076 C18orf8Q96DM3 657 aa4.06□□□□□ -1.76
SMAD4-207ENST00000589076 ASB2Q96Q27 587 aa4.06□□□□□ -1.76
SMAD4-207ENST00000589076 SPRTNQ9H040 489 aaPredicted RBP4.06□□□□□ -1.76
SMAD4-207ENST00000589076 PCDHAC1Q9H158 963 aa4.06□□□□□ -1.76
SMAD4-207ENST00000589076 OBP2BQ9NPH6 170 aa4.06□□□□□ -1.76
SMAD4-207ENST00000589076 CA14Q9ULX7 337 aa4.06□□□□□ -1.76
SMAD4-207ENST00000589076 SSX2IPQ9Y2D8 614 aa4.06□□□□□ -1.76
SMAD4-207ENST00000589076 MORC2Q9Y6X9 1032 aaPredicted RBP4.06□□□□□ -1.76
SMAD4-207ENST00000589076 SMIM35A0A1B0GVV1 85 aa4.05□□□□□ -1.76
SMAD4-207ENST00000589076 NPC1O15118 1278 aa4.05□□□□□ -1.76
SMAD4-207ENST00000589076 CD3EAPO15446 510 aaKnown RBP4.05□□□□□ -1.76
SMAD4-207ENST00000589076 CREB3O43889 395 aa4.05□□□□□ -1.76
SMAD4-207ENST00000589076 CCNT2O60583 730 aaKnown RBP4.05□□□□□ -1.76
SMAD4-207ENST00000589076 TLR5O60602 858 aa4.05□□□□□ -1.76
SMAD4-207ENST00000589076 SRGAP2O75044 1071 aa4.05□□□□□ -1.76
SMAD4-207ENST00000589076 CSF1RP07333 972 aa4.05□□□□□ -1.76
SMAD4-207ENST00000589076 PDIA3P30101 505 aaKnown RBP4.05□□□□□ -1.76
SMAD4-207ENST00000589076 CYP2C18P33260 490 aa4.05□□□□□ -1.76
SMAD4-207ENST00000589076 ARHGAP25P42331 645 aa4.05□□□□□ -1.76
SMAD4-207ENST00000589076 PDE6CP51160 858 aa4.05□□□□□ -1.76
SMAD4-207ENST00000589076 ITGA8P53708 1063 aa4.05□□□□□ -1.76
SMAD4-207ENST00000589076 BCAT1P54687 386 aa4.05□□□□□ -1.76
SMAD4-207ENST00000589076 POLE2P56282 527 aa4.05□□□□□ -1.76
SMAD4-207ENST00000589076 HOXA4Q00056 320 aaPredicted RBP4.05□□□□□ -1.76
SMAD4-207ENST00000589076 FOXO1Q12778 655 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms