RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 OSBPL9Q96SU4 736 aa15.13■□□□□ 0.01
NPC1-207ENST00000588867 FAM204AQ9H8W3 233 aa15.13■□□□□ 0.01
NPC1-207ENST00000588867 DDIT4Q9NX09 232 aa15.13■□□□□ 0.01
NPC1-207ENST00000588867 RRN3Q9NYV6 651 aa15.13■□□□□ 0.01
NPC1-207ENST00000588867 TRPM5Q9NZQ8 1165 aa15.13■□□□□ 0.01
NPC1-207ENST00000588867 CALCOCO1Q9P1Z2 691 aa15.13■□□□□ 0.01
NPC1-207ENST00000588867 UXTQ9UBK9 157 aaPredicted RBP15.13■□□□□ 0.01
NPC1-207ENST00000588867 SFMBT1Q9UHJ3 866 aa15.13■□□□□ 0.01
NPC1-207ENST00000588867 DPP7Q9UHL4 492 aa15.13■□□□□ 0.01
NPC1-207ENST00000588867 PRPSAP2O60256 369 aa15.12■□□□□ 0.01
NPC1-207ENST00000588867 ZMYND10O75800 440 aa15.12■□□□□ 0.01
NPC1-207ENST00000588867 TRUB2O95900 331 aaKnown RBP15.12■□□□□ 0.01
NPC1-207ENST00000588867 C1RP00736 705 aa15.12■□□□□ 0.01
NPC1-207ENST00000588867 CTNNA2P26232 953 aa15.12■□□□□ 0.01
NPC1-207ENST00000588867 PCK1P35558 622 aa15.12■□□□□ 0.01
NPC1-207ENST00000588867 DUSP6Q16828 381 aa15.12■□□□□ 0.01
NPC1-207ENST00000588867 ATP13A4Q4VNC1 1196 aa15.12■□□□□ 0.01
NPC1-207ENST00000588867 TXNRD3NBQ6F5E7 133 aa15.12■□□□□ 0.01
NPC1-207ENST00000588867 STRADAQ7RTN6 431 aa15.12■□□□□ 0.01
NPC1-207ENST00000588867 DQX1Q8TE96 717 aaKnown RBP15.12■□□□□ 0.01
NPC1-207ENST00000588867 ALG3Q92685 438 aa15.12■□□□□ 0.01
NPC1-207ENST00000588867 PPP2R3CQ969Q6 453 aa15.12■□□□□ 0.01
NPC1-207ENST00000588867 ZNF334Q9HCZ1 680 aaPredicted RBP15.12■□□□□ 0.01
NPC1-207ENST00000588867 CLIC5Q9NZA1 410 aa15.12■□□□□ 0.01
NPC1-207ENST00000588867 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.12■□□□□ 0.01
NPC1-207ENST00000588867 ATG2AQ2TAZ0 1938 aa15.12■□□□□ 0.01
NPC1-207ENST00000588867 A0A1W2PPC1 479 aa15.12■□□□□ 0.01
NPC1-207ENST00000588867 ZNF185O15231 689 aa15.12■□□□□ 0.01
NPC1-207ENST00000588867 TBX18O95935 607 aa15.12■□□□□ 0.01
NPC1-207ENST00000588867 IL1R2P27930 398 aa15.12■□□□□ 0.01
NPC1-207ENST00000588867 GBP1P32455 592 aa15.12■□□□□ 0.01
NPC1-207ENST00000588867 GTF2F1P35269 517 aaKnown RBP eCLIP15.12■□□□□ 0.01
NPC1-207ENST00000588867 PEX5P50542 639 aa15.12■□□□□ 0.01
NPC1-207ENST00000588867 RWDD2BP57060 319 aa15.12■□□□□ 0.01
NPC1-207ENST00000588867 EFEMP1Q12805 493 aa15.12■□□□□ 0.01
NPC1-207ENST00000588867 SMTNL2Q2TAL5 461 aa15.12■□□□□ 0.01
NPC1-207ENST00000588867 ODF2Q5BJF6 829 aa15.12■□□□□ 0.01
NPC1-207ENST00000588867 KCNT1Q5JUK3 1230 aa15.12■□□□□ 0.01
NPC1-207ENST00000588867 C10orf120Q5SQS8 335 aa15.12■□□□□ 0.01
NPC1-207ENST00000588867 ELMSAN1Q6PJG2 1045 aa15.12■□□□□ 0.01
NPC1-207ENST00000588867 TAC4Q86UU9 113 aa15.12■□□□□ 0.01
NPC1-207ENST00000588867 FAM131BQ86XD5 332 aa15.12■□□□□ 0.01
NPC1-207ENST00000588867 HS6ST3Q8IZP7 471 aa15.12■□□□□ 0.01
NPC1-207ENST00000588867 UBE2Q2Q8WVN8 375 aa15.12■□□□□ 0.01
NPC1-207ENST00000588867 OVCA2Q8WZ82 227 aa15.12■□□□□ 0.01
NPC1-207ENST00000588867 CASP10Q92851 521 aa15.12■□□□□ 0.01
NPC1-207ENST00000588867 ACSF2Q96CM8 615 aaPredicted RBP15.12■□□□□ 0.01
NPC1-207ENST00000588867 CAPZA3Q96KX2 299 aa15.12■□□□□ 0.01
NPC1-207ENST00000588867 NCAPGQ9BPX3 1015 aa15.12■□□□□ 0.01
NPC1-207ENST00000588867 CORO1BQ9BR76 489 aa15.12■□□□□ 0.01
NPC1-207ENST00000588867 CCSER2Q9H7U1 834 aa15.12■□□□□ 0.01
NPC1-207ENST00000588867 KLHL11Q9NVR0 708 aa15.12■□□□□ 0.01
NPC1-207ENST00000588867 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.12■□□□□ 0.01
NPC1-207ENST00000588867 COL4A4P53420 1690 aaPredicted RBP15.11■□□□□ 0.01
NPC1-207ENST00000588867 ZNF840PA6NDX5 716 aa15.11■□□□□ 0.01
NPC1-207ENST00000588867 PSTPIP1O43586 416 aa15.11■□□□□ 0.01
NPC1-207ENST00000588867 KRT7P08729 469 aa15.11■□□□□ 0.01
NPC1-207ENST00000588867 ZDHHC11BP0C7U3 371 aa15.11■□□□□ 0.01
NPC1-207ENST00000588867 PRLRP16471 622 aa15.11■□□□□ 0.01
NPC1-207ENST00000588867 TCP1P17987 556 aaKnown RBP15.11■□□□□ 0.01
NPC1-207ENST00000588867 RDXP35241 583 aaKnown RBP15.11■□□□□ 0.01
NPC1-207ENST00000588867 AMPD2Q01433 879 aa15.11■□□□□ 0.01
NPC1-207ENST00000588867 SLC25A11Q02978 314 aaKnown RBP15.11■□□□□ 0.01
NPC1-207ENST00000588867 ZNF211Q13398 564 aaPredicted RBP15.11■□□□□ 0.01
NPC1-207ENST00000588867 OTUD1Q5VV17 481 aaPredicted RBP15.11■□□□□ 0.01
NPC1-207ENST00000588867 SND1Q7KZF4 910 aaKnown RBP eCLIP15.11■□□□□ 0.011e-8■■□□□ 14.2
NPC1-207ENST00000588867 RTL10Q7L3V2 364 aa15.11■□□□□ 0.01
NPC1-207ENST00000588867 COG1Q8WTW3 980 aa15.11■□□□□ 0.01
NPC1-207ENST00000588867 HDAC7Q8WUI4 952 aa15.11■□□□□ 0.01
NPC1-207ENST00000588867 HSPH1Q92598 858 aa15.11■□□□□ 0.01
NPC1-207ENST00000588867 RNF34Q969K3 372 aa15.11■□□□□ 0.01
NPC1-207ENST00000588867 PEBP4Q96S96 227 aa15.11■□□□□ 0.01
NPC1-207ENST00000588867 NACA2Q9H009 215 aa15.11■□□□□ 0.01
NPC1-207ENST00000588867 PRDM12Q9H4Q4 367 aa15.11■□□□□ 0.01
NPC1-207ENST00000588867 PIGVQ9NUD9 493 aa15.11■□□□□ 0.01
NPC1-207ENST00000588867 MDM4O15151 490 aa15.1■□□□□ 0.01
NPC1-207ENST00000588867 TLR5O60602 858 aa15.1■□□□□ 0.01
NPC1-207ENST00000588867 ENDOD1O94919 500 aa15.1■□□□□ 0.01
NPC1-207ENST00000588867 F9P00740 461 aa15.1■□□□□ 0.01
NPC1-207ENST00000588867 MYL4P12829 197 aa15.1■□□□□ 0.01
NPC1-207ENST00000588867 GABRR2P28476 465 aa15.1■□□□□ 0.01
NPC1-207ENST00000588867 PABPC1LQ4VXU2 614 aaKnown RBP15.1■□□□□ 0.01
NPC1-207ENST00000588867 LRRC38Q5VT99 294 aa15.1■□□□□ 0.01
NPC1-207ENST00000588867 MIB1Q86YT6 1006 aa15.1■□□□□ 0.01
NPC1-207ENST00000588867 OLA1Q9NTK5 396 aaKnown RBP15.1■□□□□ 0.01
NPC1-207ENST00000588867 HCFC1R1Q9NWW0 138 aa15.1■□□□□ 0.01
NPC1-207ENST00000588867 CCDC195A0A1B0GUA6 201 aa15.1■□□□□ 0.01
NPC1-207ENST00000588867 MSI1O43347 362 aaKnown RBP15.1■□□□□ 0.01
NPC1-207ENST00000588867 CEP104O60308 925 aa15.1■□□□□ 0.01
NPC1-207ENST00000588867 RARAP10276 462 aa15.1■□□□□ 0.01
NPC1-207ENST00000588867 PYGMP11217 842 aa15.1■□□□□ 0.01
NPC1-207ENST00000588867 PTPN2P17706 415 aa15.1■□□□□ 0.01
NPC1-207ENST00000588867 PPP3CCP48454 512 aa15.1■□□□□ 0.01
NPC1-207ENST00000588867 HECTD3Q5T447 861 aa15.1■□□□□ 0.01
NPC1-207ENST00000588867 DCAF12L1Q5VU92 463 aa15.1■□□□□ 0.01
NPC1-207ENST00000588867 PBKQ96KB5 322 aa15.1■□□□□ 0.01
NPC1-207ENST00000588867 SMOC2Q9H3U7 446 aa15.1■□□□□ 0.01
NPC1-207ENST00000588867 NSUN3Q9H649 340 aaKnown RBP15.1■□□□□ 0.01
NPC1-207ENST00000588867 ASAH2Q9NR71 780 aa15.1■□□□□ 0.01
NPC1-207ENST00000588867 RASAL2Q9UJF2 1139 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms