RNA–Protein interactions for RNA: ENST00000588458.1

ABCA8-210, Transcript of ATP binding cassette subfamily A member 8, human

TSL 2

Gene ABCA8, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA8-210	ENST00000588458	MAPK13	O15264	365 aa		13.55	□□□□□ -0.24
ABCA8-210	ENST00000588458	AP5Z1	O43299	807 aa		13.55	□□□□□ -0.24
ABCA8-210	ENST00000588458	GREM1	O60565	184 aa		13.55	□□□□□ -0.24
ABCA8-210	ENST00000588458	CEACAM1	P13688	526 aa		13.55	□□□□□ -0.24
ABCA8-210	ENST00000588458	GABRG2	P18507	467 aa		13.55	□□□□□ -0.24
ABCA8-210	ENST00000588458	ITPKA	P23677	461 aa		13.55	□□□□□ -0.24
ABCA8-210	ENST00000588458	RPL13	P26373	211 aa	Known RBP	13.55	□□□□□ -0.24
ABCA8-210	ENST00000588458	ATXN3	P54252	364 aa	Predicted RBP	13.55	□□□□□ -0.24
ABCA8-210	ENST00000588458	PPP3CA	Q08209	521 aa		13.55	□□□□□ -0.24
ABCA8-210	ENST00000588458	FOXC1	Q12948	553 aa		13.55	□□□□□ -0.24
ABCA8-210	ENST00000588458	ADAM9	Q13443	819 aa		13.55	□□□□□ -0.24
ABCA8-210	ENST00000588458	ZNF394	Q53GI3	561 aa		13.55	□□□□□ -0.24
ABCA8-210	ENST00000588458	SPDYC	Q5MJ68	293 aa		13.55	□□□□□ -0.24
ABCA8-210	ENST00000588458	SLC36A4	Q6YBV0	504 aa		13.55	□□□□□ -0.24
ABCA8-210	ENST00000588458	INTS8	Q75QN2	995 aa	Known RBP	13.55	□□□□□ -0.24
ABCA8-210	ENST00000588458	MIB1	Q86YT6	1006 aa		13.55	□□□□□ -0.24
ABCA8-210	ENST00000588458	FAM186B	Q8IYM0	893 aa		13.55	□□□□□ -0.24
ABCA8-210	ENST00000588458	DEFB124	Q8NES8	71 aa		13.55	□□□□□ -0.24
ABCA8-210	ENST00000588458	HEXIM2	Q96MH2	286 aa	Known RBP	13.55	□□□□□ -0.24
ABCA8-210	ENST00000588458	ACOX2	Q99424	681 aa		13.55	□□□□□ -0.24
ABCA8-210	ENST00000588458	NMUR1	Q9HB89	426 aa		13.55	□□□□□ -0.24
ABCA8-210	ENST00000588458	PLK2	Q9NYY3	685 aa		13.55	□□□□□ -0.24
ABCA8-210	ENST00000588458	HCN2	Q9UL51	889 aa		13.55	□□□□□ -0.24
ABCA8-210	ENST00000588458	STARD13	Q9Y3M8	1113 aa		13.55	□□□□□ -0.24
ABCA8-210	ENST00000588458	ATXN2	Q99700	1313 aa	Known RBP	13.55	□□□□□ -0.24
ABCA8-210	ENST00000588458	CACNG3	O60359	315 aa		13.54	□□□□□ -0.24
ABCA8-210	ENST00000588458	PRR29	P0C7W0	189 aa		13.54	□□□□□ -0.24
ABCA8-210	ENST00000588458	RALA	P11233	206 aa		13.54	□□□□□ -0.24
ABCA8-210	ENST00000588458	ENG	P17813	658 aa		13.54	□□□□□ -0.24
ABCA8-210	ENST00000588458	CSRP1	P21291	193 aa	Known RBP	13.54	□□□□□ -0.24
ABCA8-210	ENST00000588458	PSMC2	P35998	433 aa	Known RBP	13.54	□□□□□ -0.24
ABCA8-210	ENST00000588458	DPP6	P42658	865 aa		13.54	□□□□□ -0.24
ABCA8-210	ENST00000588458	DGKG	P49619	791 aa		13.54	□□□□□ -0.24
ABCA8-210	ENST00000588458	NDUFA8	P51970	172 aa		13.54	□□□□□ -0.24
ABCA8-210	ENST00000588458	KIF11	P52732	1056 aa		13.54	□□□□□ -0.24
ABCA8-210	ENST00000588458	KRT85	P78386	507 aa		13.54	□□□□□ -0.24
ABCA8-210	ENST00000588458	INCA1	Q0VD86	236 aa		13.54	□□□□□ -0.24
ABCA8-210	ENST00000588458	TOGARAM2	Q6ZUX3	1019 aa		13.54	□□□□□ -0.24
ABCA8-210	ENST00000588458	TADA2B	Q86TJ2	420 aa		13.54	□□□□□ -0.24
ABCA8-210	ENST00000588458	IPO4	Q8TEX9	1081 aa	Known RBP	13.54	□□□□□ -0.24
ABCA8-210	ENST00000588458	GTPBP2	Q9BX10	602 aa	Known RBP	13.54	□□□□□ -0.24
ABCA8-210	ENST00000588458	DUSP16	Q9BY84	665 aa		13.54	□□□□□ -0.24
ABCA8-210	ENST00000588458	NIF3L1	Q9GZT8	377 aa		13.54	□□□□□ -0.24
ABCA8-210	ENST00000588458	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
ABCA8-210	ENST00000588458	CALCOCO1	Q9P1Z2	691 aa		13.54	□□□□□ -0.24
ABCA8-210	ENST00000588458	PILRB	Q9UKJ0	227 aa		13.54	□□□□□ -0.24
ABCA8-210	ENST00000588458	HPSE	Q9Y251	543 aa		13.54	□□□□□ -0.24
ABCA8-210	ENST00000588458	PCDHA5	Q9Y5H7	936 aa		13.54	□□□□□ -0.24
ABCA8-210	ENST00000588458	MYO16	Q9Y6X6	1858 aa		13.54	□□□□□ -0.24
ABCA8-210	ENST00000588458	LAMA1	P25391	3075 aa		13.54	□□□□□ -0.24
ABCA8-210	ENST00000588458	NUP205	Q92621	2012 aa		13.54	□□□□□ -0.24
ABCA8-210	ENST00000588458		A0A1W2PQF6	199 aa		13.53	□□□□□ -0.24
ABCA8-210	ENST00000588458	PRRT4	C9JH25	899 aa		13.53	□□□□□ -0.24
ABCA8-210	ENST00000588458	CILP	O75339	1184 aa		13.53	□□□□□ -0.24
ABCA8-210	ENST00000588458	ZNF217	O75362	1048 aa		13.53	□□□□□ -0.24
ABCA8-210	ENST00000588458	RHOBTB3	O94955	611 aa		13.53	□□□□□ -0.24
ABCA8-210	ENST00000588458	HMBS	P08397	361 aa		13.53	□□□□□ -0.24
ABCA8-210	ENST00000588458	SPINK2	P20155	84 aa		13.53	□□□□□ -0.24
ABCA8-210	ENST00000588458	PSEN1	P49768	467 aa		13.53	□□□□□ -0.24
ABCA8-210	ENST00000588458	GFPT1	Q06210	699 aa	Predicted RBP	13.53	□□□□□ -0.24
ABCA8-210	ENST00000588458	ZNF33A	Q06730	810 aa		13.53	□□□□□ -0.24
ABCA8-210	ENST00000588458	DUOXA1	Q1HG43	343 aa		13.53	□□□□□ -0.24
ABCA8-210	ENST00000588458	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	13.53	□□□□□ -0.24
ABCA8-210	ENST00000588458	KIAA1211L	Q6NV74	962 aa		13.53	□□□□□ -0.24
ABCA8-210	ENST00000588458	KLHDC10	Q6PID8	442 aa		13.53	□□□□□ -0.24
ABCA8-210	ENST00000588458	SLC23A3	Q6PIS1	610 aa		13.53	□□□□□ -0.24
ABCA8-210	ENST00000588458	SCD5	Q86SK9	330 aa		13.53	□□□□□ -0.24
ABCA8-210	ENST00000588458	CEP76	Q8TAP6	659 aa		13.53	□□□□□ -0.24
ABCA8-210	ENST00000588458	SLC32A1	Q9H598	525 aa		13.53	□□□□□ -0.24
ABCA8-210	ENST00000588458	TMEM8A	Q9HCN3	771 aa		13.53	□□□□□ -0.24
ABCA8-210	ENST00000588458	PNPLA8	Q9NP80	782 aa		13.53	□□□□□ -0.24
ABCA8-210	ENST00000588458	FSCN3	Q9NQT6	498 aa		13.53	□□□□□ -0.24
ABCA8-210	ENST00000588458	CACNA2D2	Q9NY47	1150 aa		13.53	□□□□□ -0.24
ABCA8-210	ENST00000588458	MARK1	Q9P0L2	795 aa		13.53	□□□□□ -0.24
ABCA8-210	ENST00000588458	SLC6A14	Q9UN76	642 aa		13.53	□□□□□ -0.24
ABCA8-210	ENST00000588458	CYP8B1	Q9UNU6	501 aa		13.53	□□□□□ -0.24
ABCA8-210	ENST00000588458	RAD54B	Q9Y620	910 aa		13.53	□□□□□ -0.24
ABCA8-210	ENST00000588458	WASH3P	C4AMC7	463 aa		13.52	□□□□□ -0.25
ABCA8-210	ENST00000588458	NDUFS2	O75306	463 aa		13.52	□□□□□ -0.25
ABCA8-210	ENST00000588458	STC2	O76061	302 aa		13.52	□□□□□ -0.25
ABCA8-210	ENST00000588458	CISD3	P0C7P0	127 aa		13.52	□□□□□ -0.25
ABCA8-210	ENST00000588458	NDUFV2	P19404	249 aa		13.52	□□□□□ -0.25
ABCA8-210	ENST00000588458	COG7	P83436	770 aa		13.52	□□□□□ -0.25
ABCA8-210	ENST00000588458	EFEMP1	Q12805	493 aa		13.52	□□□□□ -0.25
ABCA8-210	ENST00000588458	DPYD	Q12882	1025 aa		13.52	□□□□□ -0.25
ABCA8-210	ENST00000588458	NFIL3	Q16649	462 aa		13.52	□□□□□ -0.25
ABCA8-210	ENST00000588458	KRT39	Q6A163	491 aa		13.52	□□□□□ -0.25
ABCA8-210	ENST00000588458	CCDC186	Q7Z3E2	898 aa		13.52	□□□□□ -0.25
ABCA8-210	ENST00000588458	RGL4	Q8IZJ4	473 aa		13.52	□□□□□ -0.25
ABCA8-210	ENST00000588458	GUF1	Q8N442	669 aa	Known RBP	13.52	□□□□□ -0.25
ABCA8-210	ENST00000588458	HDDC3	Q8N4P3	179 aa		13.52	□□□□□ -0.25
ABCA8-210	ENST00000588458	TRIML1	Q8N9V2	468 aa		13.52	□□□□□ -0.25
ABCA8-210	ENST00000588458	EEF2KMT	Q96G04	330 aa		13.52	□□□□□ -0.25
ABCA8-210	ENST00000588458	RASAL2	Q9UJF2	1139 aa		13.52	□□□□□ -0.25
ABCA8-210	ENST00000588458	ZNF510	Q9Y2H8	683 aa		13.52	□□□□□ -0.25
ABCA8-210	ENST00000588458	MYH10	P35580	1976 aa		13.52	□□□□□ -0.25
ABCA8-210	ENST00000588458	ASCC3	Q8N3C0	2202 aa	Known RBP	13.52	□□□□□ -0.25
ABCA8-210	ENST00000588458	IGHV1OR15-9	A0A0B4J2B8	117 aa		13.51	□□□□□ -0.25
ABCA8-210	ENST00000588458	C1QTNF9B	B2RNN3	333 aa		13.51	□□□□□ -0.25
ABCA8-210	ENST00000588458	TOP3B	O95985	862 aa	Known RBP	13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms