RNA–Protein interactions for RNA: ENST00000588259.5

TMED1-203, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-203ENST00000588259 HEXIM2Q96MH2 286 aaKnown RBP17.84■□□□□ 0.45
TMED1-203ENST00000588259 SCAND2PQ9GZW5 306 aaPredicted RBP17.84■□□□□ 0.45
TMED1-203ENST00000588259 GOLPH3LQ9H4A5 285 aa17.84■□□□□ 0.45
TMED1-203ENST00000588259 NMUR1Q9HB89 426 aa17.84■□□□□ 0.45
TMED1-203ENST00000588259 TMEM8AQ9HCN3 771 aa17.84■□□□□ 0.45
TMED1-203ENST00000588259 WDR35Q9P2L0 1181 aa17.84■□□□□ 0.45
TMED1-203ENST00000588259 ZDHHC9Q9Y397 364 aa17.84■□□□□ 0.45
TMED1-203ENST00000588259 CEP295Q9C0D2 2601 aa17.83■□□□□ 0.44
TMED1-203ENST00000588259 HHLA1C9JL84 531 aa17.83■□□□□ 0.44
TMED1-203ENST00000588259 CACNG3O60359 315 aa17.83■□□□□ 0.44
TMED1-203ENST00000588259 CILPO75339 1184 aa17.83■□□□□ 0.44
TMED1-203ENST00000588259 KRT37O76014 449 aa17.83■□□□□ 0.44
TMED1-203ENST00000588259 CFIP05156 583 aa17.83■□□□□ 0.44
TMED1-203ENST00000588259 RALAP11233 206 aa17.83■□□□□ 0.44
TMED1-203ENST00000588259 NTSR1P30989 418 aa17.83■□□□□ 0.44
TMED1-203ENST00000588259 PTGER3P43115 390 aa17.83■□□□□ 0.44
TMED1-203ENST00000588259 MAPK8P45983 427 aa17.83■□□□□ 0.44
TMED1-203ENST00000588259 MXI1P50539 228 aa17.83■□□□□ 0.44
TMED1-203ENST00000588259 IRX4P78413 519 aa17.83■□□□□ 0.44
TMED1-203ENST00000588259 NFIL3Q16649 462 aa17.83■□□□□ 0.44
TMED1-203ENST00000588259 TRIM61Q5EBN2 209 aa17.83■□□□□ 0.44
TMED1-203ENST00000588259 TADA2BQ86TJ2 420 aa17.83■□□□□ 0.44
TMED1-203ENST00000588259 SMYD4Q8IYR2 804 aaPredicted RBP17.83■□□□□ 0.44
TMED1-203ENST00000588259 DEFB119Q8N690 84 aa17.83■□□□□ 0.44
TMED1-203ENST00000588259 KCNV2Q8TDN2 545 aa17.83■□□□□ 0.44
TMED1-203ENST00000588259 DUSP9Q99956 384 aaKnown RBP17.83■□□□□ 0.44
TMED1-203ENST00000588259 NUSAP1Q9BXS6 441 aaKnown RBP17.83■□□□□ 0.44
TMED1-203ENST00000588259 GDPD2Q9HCC8 539 aa17.83■□□□□ 0.44
TMED1-203ENST00000588259 PNPLA8Q9NP80 782 aa17.83■□□□□ 0.44
TMED1-203ENST00000588259 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.83■□□□□ 0.44
TMED1-203ENST00000588259 CALCOCO1Q9P1Z2 691 aa17.83■□□□□ 0.44
TMED1-203ENST00000588259 MBD1Q9UIS9 605 aaPredicted RBP17.83■□□□□ 0.44
TMED1-203ENST00000588259 RASAL2Q9UJF2 1139 aa17.83■□□□□ 0.44
TMED1-203ENST00000588259 TNRC6BQ9UPQ9 1833 aaKnown RBP17.83■□□□□ 0.44
TMED1-203ENST00000588259 ZNF202O95125 648 aa17.82■□□□□ 0.44
TMED1-203ENST00000588259 HMBSP08397 361 aa17.82■□□□□ 0.44
TMED1-203ENST00000588259 EPB41P11171 864 aaKnown RBP17.82■□□□□ 0.44
TMED1-203ENST00000588259 PMLP29590 882 aa17.82■□□□□ 0.44
TMED1-203ENST00000588259 PLA2G4AP47712 749 aa17.82■□□□□ 0.44
TMED1-203ENST00000588259 DGKGP49619 791 aa17.82■□□□□ 0.44
TMED1-203ENST00000588259 RPL6Q02878 288 aaKnown RBP17.82■□□□□ 0.44
TMED1-203ENST00000588259 MAP7D1Q3KQU3 841 aa17.82■□□□□ 0.44
TMED1-203ENST00000588259 PPP1R26Q5T8A7 1209 aaPredicted RBP17.82■□□□□ 0.44
TMED1-203ENST00000588259 SH3PXD2AQ5TCZ1 1133 aa17.82■□□□□ 0.44
TMED1-203ENST00000588259 TCERG1LQ5VWI1 586 aa17.82■□□□□ 0.44
TMED1-203ENST00000588259 KRT39Q6A163 491 aa17.82■□□□□ 0.44
TMED1-203ENST00000588259 TOGARAM2Q6ZUX3 1019 aa17.82■□□□□ 0.44
TMED1-203ENST00000588259 RSRC2Q7L4I2 434 aaKnown RBP17.82■□□□□ 0.44
TMED1-203ENST00000588259 DUSP16Q9BY84 665 aa17.82■□□□□ 0.44
TMED1-203ENST00000588259 PLK2Q9NYY3 685 aa17.82■□□□□ 0.44
TMED1-203ENST00000588259 ASCC3Q8N3C0 2202 aaKnown RBP17.82■□□□□ 0.44
TMED1-203ENST00000588259 KMT2BQ9UMN6 2715 aaPredicted RBP17.81■□□□□ 0.44
TMED1-203ENST00000588259 FAM237AA0A1B0GTK4 181 aa17.81■□□□□ 0.44
TMED1-203ENST00000588259 A0A1W2PQ27 194 aa17.81■□□□□ 0.44
TMED1-203ENST00000588259 A0A1W2PQ64 194 aa17.81■□□□□ 0.44
TMED1-203ENST00000588259 A0A1W2PQD8 194 aa17.81■□□□□ 0.44
TMED1-203ENST00000588259 GIPC1O14908 333 aa17.81■□□□□ 0.44
TMED1-203ENST00000588259 AP5Z1O43299 807 aa17.81■□□□□ 0.44
TMED1-203ENST00000588259 GABRG2P18507 467 aa17.81■□□□□ 0.44
TMED1-203ENST00000588259 GTF2H1P32780 548 aa17.81■□□□□ 0.44
TMED1-203ENST00000588259 PSEN1P49768 467 aa17.81■□□□□ 0.44
TMED1-203ENST00000588259 KIF11P52732 1056 aa17.81■□□□□ 0.44
TMED1-203ENST00000588259 ZNF252P-AS1Q0IIN9 211 aa17.81■□□□□ 0.44
TMED1-203ENST00000588259 LMAN2Q12907 356 aa17.81■□□□□ 0.44
TMED1-203ENST00000588259 DCAF17Q5H9S7 520 aaPredicted RBP17.81■□□□□ 0.44
TMED1-203ENST00000588259 CCDC186Q7Z3E2 898 aa17.81■□□□□ 0.44
TMED1-203ENST00000588259 SYT12Q8IV01 421 aa17.81■□□□□ 0.44
TMED1-203ENST00000588259 SEMA4DQ92854 862 aa17.81■□□□□ 0.44
TMED1-203ENST00000588259 ACOX2Q99424 681 aa17.81■□□□□ 0.44
TMED1-203ENST00000588259 ADAMTS9Q9P2N4 1935 aa17.8■□□□□ 0.44
TMED1-203ENST00000588259 CETN3O15182 167 aa17.8■□□□□ 0.44
TMED1-203ENST00000588259 STX10O60499 249 aa17.8■□□□□ 0.44
TMED1-203ENST00000588259 GREM1O60565 184 aa17.8■□□□□ 0.44
TMED1-203ENST00000588259 STC2O76061 302 aa17.8■□□□□ 0.44
TMED1-203ENST00000588259 ITPKAP23677 461 aa17.8■□□□□ 0.44
TMED1-203ENST00000588259 SLC8A3P57103 927 aa17.8■□□□□ 0.44
TMED1-203ENST00000588259 ENPEPQ07075 957 aa17.8■□□□□ 0.44
TMED1-203ENST00000588259 EFEMP1Q12805 493 aa17.8■□□□□ 0.44
TMED1-203ENST00000588259 ZCWPW2Q504Y3 356 aa17.8■□□□□ 0.44
TMED1-203ENST00000588259 KLHDC10Q6PID8 442 aa17.8■□□□□ 0.44
TMED1-203ENST00000588259 KIAA1324Q6UXG2 1013 aaKnown RBP17.8■□□□□ 0.44
TMED1-203ENST00000588259 SCD5Q86SK9 330 aa17.8■□□□□ 0.44
TMED1-203ENST00000588259 TTC39CQ8N584 583 aa17.8■□□□□ 0.44
TMED1-203ENST00000588259 FBXL13Q8NEE6 735 aa17.8■□□□□ 0.44
TMED1-203ENST00000588259 CDK5RAP1Q96SZ6 601 aaKnown RBP17.8■□□□□ 0.44
TMED1-203ENST00000588259 ARID3AQ99856 593 aa17.8■□□□□ 0.44
TMED1-203ENST00000588259 CISHQ9NSE2 258 aa17.8■□□□□ 0.44
TMED1-203ENST00000588259 CACNA2D2Q9NY47 1150 aa17.8■□□□□ 0.44
TMED1-203ENST00000588259 MARK1Q9P0L2 795 aa17.8■□□□□ 0.44
TMED1-203ENST00000588259 CYP8B1Q9UNU6 501 aa17.8■□□□□ 0.44
TMED1-203ENST00000588259 RAD54BQ9Y620 910 aa17.8■□□□□ 0.44
TMED1-203ENST00000588259 USP24Q9UPU5 2620 aa17.8■□□□□ 0.44
TMED1-203ENST00000588259 PRRT4C9JH25 899 aa17.79■□□□□ 0.44
TMED1-203ENST00000588259 NDUFV2P19404 249 aa17.79■□□□□ 0.44
TMED1-203ENST00000588259 CORO1AP31146 461 aaKnown RBP17.79■□□□□ 0.44
TMED1-203ENST00000588259 DPP6P42658 865 aa17.79■□□□□ 0.44
TMED1-203ENST00000588259 ATXN3P54252 364 aaPredicted RBP17.79■□□□□ 0.44
TMED1-203ENST00000588259 FOXC1Q12948 553 aa17.79■□□□□ 0.44
TMED1-203ENST00000588259 PNOCQ13519 176 aa17.79■□□□□ 0.44
TMED1-203ENST00000588259 EDRF1Q3B7T1 1238 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms