RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 SOD2P04179 222 aa15.26■□□□□ 0.03
CCDC43-203ENST00000588210 TBXAS1P24557 533 aaPredicted RBP15.26■□□□□ 0.03
CCDC43-203ENST00000588210 SLC8A1P32418 973 aa15.26■□□□□ 0.03
CCDC43-203ENST00000588210 VPS41P49754 854 aa15.26■□□□□ 0.03
CCDC43-203ENST00000588210 ELAVL2Q12926 359 aaKnown RBP15.26■□□□□ 0.03
CCDC43-203ENST00000588210 TIGD5Q53EQ6 642 aa15.26■□□□□ 0.03
CCDC43-203ENST00000588210 ARHGEF18Q6ZSZ5 1173 aa15.26■□□□□ 0.03
CCDC43-203ENST00000588210 TMC7Q7Z402 723 aa15.26■□□□□ 0.03
CCDC43-203ENST00000588210 ZCCHC9Q8N567 271 aaKnown RBP15.26■□□□□ 0.03
CCDC43-203ENST00000588210 ANKRD42Q8N9B4 389 aa15.26■□□□□ 0.03
CCDC43-203ENST00000588210 CCHCR1Q8TD31 782 aa15.26■□□□□ 0.03
CCDC43-203ENST00000588210 MAGEB18Q96M61 343 aa15.26■□□□□ 0.03
CCDC43-203ENST00000588210 CCDC77Q9BR77 488 aa15.26■□□□□ 0.03
CCDC43-203ENST00000588210 VN1R3Q9BXE9 311 aa15.26■□□□□ 0.03
CCDC43-203ENST00000588210 ZBP1Q9H171 429 aa15.26■□□□□ 0.03
CCDC43-203ENST00000588210 APOBEC3GQ9HC16 384 aaKnown RBP15.26■□□□□ 0.03
CCDC43-203ENST00000588210 PCDHB4Q9Y5E5 795 aa15.26■□□□□ 0.03
CCDC43-203ENST00000588210 SF3B1O75533 1304 aaKnown RBP eCLIP15.26■□□□□ 0.03
CCDC43-203ENST00000588210 UBOX5O94941 541 aa15.26■□□□□ 0.03
CCDC43-203ENST00000588210 ATP6V1G2O95670 118 aa15.26■□□□□ 0.03
CCDC43-203ENST00000588210 CFHP08603 1231 aa15.26■□□□□ 0.03
CCDC43-203ENST00000588210 CTSAP10619 480 aa15.26■□□□□ 0.03
CCDC43-203ENST00000588210 IRS1P35568 1242 aa15.26■□□□□ 0.03
CCDC43-203ENST00000588210 LMNB2Q03252 620 aa15.26■□□□□ 0.03
CCDC43-203ENST00000588210 RIPK1Q13546 671 aa15.26■□□□□ 0.03
CCDC43-203ENST00000588210 MPP2Q14168 576 aa15.26■□□□□ 0.03
CCDC43-203ENST00000588210 FAM133BQ5BKY9 247 aaKnown RBP15.26■□□□□ 0.03
CCDC43-203ENST00000588210 NUGGCQ68CJ6 796 aa15.26■□□□□ 0.03
CCDC43-203ENST00000588210 SPATA21Q7Z572 469 aa15.26■□□□□ 0.03
CCDC43-203ENST00000588210 WDR49Q8IV35 697 aa15.26■□□□□ 0.03
CCDC43-203ENST00000588210 PASD1Q8IV76 773 aa15.26■□□□□ 0.03
CCDC43-203ENST00000588210 CYP4X1Q8N118 509 aa15.26■□□□□ 0.03
CCDC43-203ENST00000588210 RBBP8NLQ8NC74 664 aaPredicted RBP15.26■□□□□ 0.03
CCDC43-203ENST00000588210 HASPINQ8TF76 798 aa15.26■□□□□ 0.03
CCDC43-203ENST00000588210 PWWP2AQ96N64 755 aa15.26■□□□□ 0.03
CCDC43-203ENST00000588210 CGRRF1Q99675 332 aa15.26■□□□□ 0.03
CCDC43-203ENST00000588210 GPR62Q9BZJ7 368 aa15.26■□□□□ 0.03
CCDC43-203ENST00000588210 NSUN3Q9H649 340 aaKnown RBP15.26■□□□□ 0.03
CCDC43-203ENST00000588210 KCNK9Q9NPC2 374 aa15.26■□□□□ 0.03
CCDC43-203ENST00000588210 ENTPD7Q9NQZ7 604 aa15.26■□□□□ 0.03
CCDC43-203ENST00000588210 DPP3Q9NY33 737 aa15.26■□□□□ 0.03
CCDC43-203ENST00000588210 ARL2BPQ9Y2Y0 163 aa15.26■□□□□ 0.03
CCDC43-203ENST00000588210 CD58P19256 250 aa15.25■□□□□ 0.03
CCDC43-203ENST00000588210 CETN2P41208 172 aa15.25■□□□□ 0.03
CCDC43-203ENST00000588210 NCALDP61601 193 aa15.25■□□□□ 0.03
CCDC43-203ENST00000588210 TFAMQ00059 246 aaKnown RBP15.25■□□□□ 0.03
CCDC43-203ENST00000588210 SF3A3Q12874 501 aaKnown RBP eCLIP15.25■□□□□ 0.03
CCDC43-203ENST00000588210 DRICH1Q6PGQ1 229 aaPredicted RBP15.25■□□□□ 0.03
CCDC43-203ENST00000588210 TMEM270Q6UE05 265 aa15.25■□□□□ 0.03
CCDC43-203ENST00000588210 CD300LGQ6UXG3 332 aa15.25■□□□□ 0.03
CCDC43-203ENST00000588210 PPP1R21Q6ZMI0 780 aa15.25■□□□□ 0.03
CCDC43-203ENST00000588210 ANKS1BQ7Z6G8 1248 aa15.25■□□□□ 0.03
CCDC43-203ENST00000588210 C3orf58Q8NDZ4 430 aa15.25■□□□□ 0.03
CCDC43-203ENST00000588210 FEZF2Q8TBJ5 459 aa15.25■□□□□ 0.03
CCDC43-203ENST00000588210 PPP2R3CQ969Q6 453 aa15.25■□□□□ 0.03
CCDC43-203ENST00000588210 RBM41Q96IZ5 413 aaKnown RBP15.25■□□□□ 0.03
CCDC43-203ENST00000588210 MYCBPQ99417 103 aaPredicted RBP15.25■□□□□ 0.03
CCDC43-203ENST00000588210 HERC2P3Q9BVR0 1158 aa15.25■□□□□ 0.03
CCDC43-203ENST00000588210 PARVAQ9NVD7 372 aa15.25■□□□□ 0.03
CCDC43-203ENST00000588210 GEMIN8Q9NWZ8 242 aaKnown RBP15.25■□□□□ 0.03
CCDC43-203ENST00000588210 PRKAG3Q9UGI9 489 aa15.25■□□□□ 0.03
CCDC43-203ENST00000588210 IP6K2Q9UHH9 426 aa15.25■□□□□ 0.03
CCDC43-203ENST00000588210 AGAP1Q9UPQ3 857 aa15.25■□□□□ 0.03
CCDC43-203ENST00000588210 NAALADL1Q9UQQ1 740 aa15.25■□□□□ 0.03
CCDC43-203ENST00000588210 SSX2IPQ9Y2D8 614 aa15.25■□□□□ 0.03
CCDC43-203ENST00000588210 NUB1Q9Y5A7 615 aa15.25■□□□□ 0.03
CCDC43-203ENST00000588210 IRAK3Q9Y616 596 aa15.25■□□□□ 0.03
CCDC43-203ENST00000588210 CSPG5O95196 566 aa15.24■□□□□ 0.03
CCDC43-203ENST00000588210 TMEM191BP0C7N4 346 aa15.24■□□□□ 0.03
CCDC43-203ENST00000588210 PAX3P23760 479 aa15.24■□□□□ 0.03
CCDC43-203ENST00000588210 STX2P32856 288 aa15.24■□□□□ 0.03
CCDC43-203ENST00000588210 ZNF132P52740 706 aa15.24■□□□□ 0.03
CCDC43-203ENST00000588210 DUOXA2Q1HG44 320 aa15.24■□□□□ 0.03
CCDC43-203ENST00000588210 USP41Q3LFD5 358 aa15.24■□□□□ 0.03
CCDC43-203ENST00000588210 C9orf57Q5W0N0 161 aa15.24■□□□□ 0.03
CCDC43-203ENST00000588210 ANKRD36BP1Q96IX9 119 aa15.24■□□□□ 0.03
CCDC43-203ENST00000588210 NKIRAS1Q9NYS0 192 aa15.24■□□□□ 0.03
CCDC43-203ENST00000588210 MCM8Q9UJA3 840 aa15.24■□□□□ 0.03
CCDC43-203ENST00000588210 USTQ9Y2C2 406 aa15.24■□□□□ 0.03
CCDC43-203ENST00000588210 PIRO00625 290 aa15.24■□□□□ 0.03
CCDC43-203ENST00000588210 LIASO43766 372 aa15.24■□□□□ 0.03
CCDC43-203ENST00000588210 CXCL14O95715 111 aa15.24■□□□□ 0.03
CCDC43-203ENST00000588210 MAGEA4P43358 317 aa15.24■□□□□ 0.03
CCDC43-203ENST00000588210 NOP14P78316 857 aaKnown RBP15.24■□□□□ 0.03
CCDC43-203ENST00000588210 NR1H3Q13133 447 aa15.24■□□□□ 0.03
CCDC43-203ENST00000588210 P3H1Q32P28 736 aa15.24■□□□□ 0.03
CCDC43-203ENST00000588210 PLPP4Q5VZY2 271 aa15.24■□□□□ 0.03
CCDC43-203ENST00000588210 TAS1R1Q7RTX1 841 aa15.24■□□□□ 0.03
CCDC43-203ENST00000588210 GPR65Q8IYL9 337 aa15.24■□□□□ 0.03
CCDC43-203ENST00000588210 RCOR2Q8IZ40 523 aa15.24■□□□□ 0.03
CCDC43-203ENST00000588210 UBR7Q8N806 425 aa15.24■□□□□ 0.03
CCDC43-203ENST00000588210 MRPL43Q8N983 215 aaKnown RBP15.24■□□□□ 0.03
CCDC43-203ENST00000588210 C9orf72Q96LT7 481 aa15.24■□□□□ 0.03
CCDC43-203ENST00000588210 RBM15Q96T37 977 aaKnown RBP eCLIP15.24■□□□□ 0.03
CCDC43-203ENST00000588210 FAM118BQ9BPY3 351 aa15.24■□□□□ 0.03
CCDC43-203ENST00000588210 NOD2Q9HC29 1040 aa15.24■□□□□ 0.03
CCDC43-203ENST00000588210 MLXIPLQ9NP71 852 aa15.24■□□□□ 0.03
CCDC43-203ENST00000588210 MRPL17Q9NRX2 175 aaKnown RBP15.24■□□□□ 0.03
CCDC43-203ENST00000588210 PRRC2BQ5JSZ5 2229 aaKnown RBP15.24■□□□□ 0.03
CCDC43-203ENST00000588210 FOXO6A8MYZ6 492 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms