RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 SMAD4Q13485 552 aaKnown RBP17.73■□□□□ 0.43
PRKCSH-203ENST00000586486 DCAF6Q58WW2 860 aa17.73■□□□□ 0.43
PRKCSH-203ENST00000586486 SYPL2Q5VXT5 272 aa17.73■□□□□ 0.43
PRKCSH-203ENST00000586486 EMC1Q8N766 993 aa17.73■□□□□ 0.43
PRKCSH-203ENST00000586486 MAFAQ8NHW3 353 aaPredicted RBP17.73■□□□□ 0.43
PRKCSH-203ENST00000586486 ITFG1Q8TB96 612 aa17.73■□□□□ 0.43
PRKCSH-203ENST00000586486 SLC35G2Q8TBE7 412 aa17.73■□□□□ 0.43
PRKCSH-203ENST00000586486 RNF139Q8WU17 664 aa17.73■□□□□ 0.43
PRKCSH-203ENST00000586486 PPM1EQ8WY54 764 aa17.73■□□□□ 0.43
PRKCSH-203ENST00000586486 CALR3Q96L12 384 aaKnown RBP17.73■□□□□ 0.43
PRKCSH-203ENST00000586486 TSGA10Q9BZW7 698 aa17.73■□□□□ 0.43
PRKCSH-203ENST00000586486 SMOC2Q9H3U7 446 aa17.73■□□□□ 0.43
PRKCSH-203ENST00000586486 TASP1Q9H6P5 420 aa17.73■□□□□ 0.43
PRKCSH-203ENST00000586486 CCSER2Q9H7U1 834 aa17.73■□□□□ 0.43
PRKCSH-203ENST00000586486 LCMT1Q9UIC8 334 aa17.73■□□□□ 0.43
PRKCSH-203ENST00000586486 STAP1Q9ULZ2 295 aa17.73■□□□□ 0.43
PRKCSH-203ENST00000586486 PYCARDQ9ULZ3 195 aa17.73■□□□□ 0.43
PRKCSH-203ENST00000586486 NAALADL1Q9UQQ1 740 aa17.73■□□□□ 0.43
PRKCSH-203ENST00000586486 C2orf78A6NCI8 922 aa17.72■□□□□ 0.43
PRKCSH-203ENST00000586486 GJA1P17302 382 aa17.72■□□□□ 0.43
PRKCSH-203ENST00000586486 CEBPBP17676 345 aa17.72■□□□□ 0.43
PRKCSH-203ENST00000586486 GPD1P21695 349 aa17.72■□□□□ 0.43
PRKCSH-203ENST00000586486 ZNF143P52747 638 aaPredicted RBP17.72■□□□□ 0.43
PRKCSH-203ENST00000586486 TEAD2Q15562 447 aa17.72■□□□□ 0.43
PRKCSH-203ENST00000586486 RSRC2Q7L4I2 434 aaKnown RBP17.72■□□□□ 0.43
PRKCSH-203ENST00000586486 DQX1Q8TE96 717 aaKnown RBP17.72■□□□□ 0.43
PRKCSH-203ENST00000586486 RXFP2Q8WXD0 754 aa17.72■□□□□ 0.43
PRKCSH-203ENST00000586486 NPY6RQ99463 290 aa17.72■□□□□ 0.43
PRKCSH-203ENST00000586486 OSGEPQ9NPF4 335 aa17.72■□□□□ 0.43
PRKCSH-203ENST00000586486 USP15Q9Y4E8 981 aaPredicted RBP17.72■□□□□ 0.43
PRKCSH-203ENST00000586486 XIRP2A4UGR9 3374 aa17.72■□□□□ 0.43
PRKCSH-203ENST00000586486 ZSCAN12O43309 604 aa17.72■□□□□ 0.43
PRKCSH-203ENST00000586486 COCHO43405 550 aa17.72■□□□□ 0.43
PRKCSH-203ENST00000586486 KRT86O43790 486 aa17.72■□□□□ 0.43
PRKCSH-203ENST00000586486 IGLV3-25P01717 112 aa17.72■□□□□ 0.43
PRKCSH-203ENST00000586486 PDGFRAP16234 1089 aa17.72■□□□□ 0.43
PRKCSH-203ENST00000586486 SDC4P31431 198 aa17.72■□□□□ 0.43
PRKCSH-203ENST00000586486 ATP5C1P36542 298 aaKnown RBP17.72■□□□□ 0.43
PRKCSH-203ENST00000586486 CBX2Q14781 532 aaPredicted RBP17.72■□□□□ 0.43
PRKCSH-203ENST00000586486 CLUL1Q15846 466 aa17.72■□□□□ 0.43
PRKCSH-203ENST00000586486 SLC25A52Q3SY17 297 aa17.72■□□□□ 0.43
PRKCSH-203ENST00000586486 STXBP5Q5T5C0 1151 aa17.72■□□□□ 0.43
PRKCSH-203ENST00000586486 GPR158Q5T848 1215 aa17.72■□□□□ 0.43
PRKCSH-203ENST00000586486 TXNDC8Q6A555 127 aa17.72■□□□□ 0.43
PRKCSH-203ENST00000586486 BNIPLQ7Z465 357 aa17.72■□□□□ 0.43
PRKCSH-203ENST00000586486 NPAS3Q8IXF0 933 aa17.72■□□□□ 0.43
PRKCSH-203ENST00000586486 TRIM44Q96DX7 344 aaPredicted RBP17.72■□□□□ 0.43
PRKCSH-203ENST00000586486 PGAP3Q96FM1 320 aaPredicted RBP17.72■□□□□ 0.43
PRKCSH-203ENST00000586486 CNPY3Q9BT09 278 aa17.72■□□□□ 0.43
PRKCSH-203ENST00000586486 TRIM7Q9C029 511 aa17.72■□□□□ 0.43
PRKCSH-203ENST00000586486 TMEM51Q9NW97 253 aa17.72■□□□□ 0.43
PRKCSH-203ENST00000586486 DNMT3LQ9UJW3 386 aa17.72■□□□□ 0.43
PRKCSH-203ENST00000586486 ANAPC7Q9UJX3 599 aa17.72■□□□□ 0.43
PRKCSH-203ENST00000586486 TRAV19A0A0A6YYK7 116 aa17.71■□□□□ 0.43
PRKCSH-203ENST00000586486 A0A0U1RQJ8 604 aa17.71■□□□□ 0.43
PRKCSH-203ENST00000586486 WEE1P30291 646 aa17.71■□□□□ 0.43
PRKCSH-203ENST00000586486 ARHGAP25P42331 645 aa17.71■□□□□ 0.43
PRKCSH-203ENST00000586486 OGDHQ02218 1023 aa17.71■□□□□ 0.43
PRKCSH-203ENST00000586486 ZNF252P-AS1Q0IIN9 211 aa17.71■□□□□ 0.43
PRKCSH-203ENST00000586486 NNTQ13423 1086 aa17.71■□□□□ 0.43
PRKCSH-203ENST00000586486 LEXMQ3ZCV2 418 aa17.71■□□□□ 0.43
PRKCSH-203ENST00000586486 CCDC14Q49A88 953 aa17.71■□□□□ 0.43
PRKCSH-203ENST00000586486 C10orf120Q5SQS8 335 aa17.71■□□□□ 0.43
PRKCSH-203ENST00000586486 OTUD1Q5VV17 481 aaPredicted RBP17.71■□□□□ 0.43
PRKCSH-203ENST00000586486 MAB21L3Q8N8X9 362 aa17.71■□□□□ 0.43
PRKCSH-203ENST00000586486 ATRIPQ8WXE1 791 aa17.71■□□□□ 0.43
PRKCSH-203ENST00000586486 CENPIQ92674 756 aaPredicted RBP17.71■□□□□ 0.43
PRKCSH-203ENST00000586486 CFAP57Q96MR6 1250 aa17.71■□□□□ 0.43
PRKCSH-203ENST00000586486 SERPINB11Q96P15 392 aa17.71■□□□□ 0.43
PRKCSH-203ENST00000586486 SLC46A2Q9BY10 475 aa17.71■□□□□ 0.43
PRKCSH-203ENST00000586486 POMKQ9H5K3 350 aa17.71■□□□□ 0.43
PRKCSH-203ENST00000586486 TRPC7Q9HCX4 862 aa17.71■□□□□ 0.43
PRKCSH-203ENST00000586486 GDE1Q9NZC3 331 aa17.71■□□□□ 0.43
PRKCSH-203ENST00000586486 SALL4Q9UJQ4 1053 aa17.71■□□□□ 0.43
PRKCSH-203ENST00000586486 DUSP10Q9Y6W6 482 aa17.71■□□□□ 0.43
PRKCSH-203ENST00000586486 DOCK8Q8NF50 2099 aa17.7■□□□□ 0.42
PRKCSH-203ENST00000586486 GRXCR2A6NFK2 248 aa17.7■□□□□ 0.42
PRKCSH-203ENST00000586486 MBTPS2O43462 519 aa17.7■□□□□ 0.42
PRKCSH-203ENST00000586486 TBX18O95935 607 aa17.7■□□□□ 0.42
PRKCSH-203ENST00000586486 HDCP19113 662 aa17.7■□□□□ 0.42
PRKCSH-203ENST00000586486 SLC7A9P82251 487 aa17.7■□□□□ 0.42
PRKCSH-203ENST00000586486 EIF4EBP2Q13542 120 aaPredicted RBP17.7■□□□□ 0.42
PRKCSH-203ENST00000586486 ACAP1Q15027 740 aa17.7■□□□□ 0.42
PRKCSH-203ENST00000586486 GET4Q7L5D6 327 aaPredicted RBP17.7■□□□□ 0.42
PRKCSH-203ENST00000586486 STRADAQ7RTN6 431 aa17.7■□□□□ 0.42
PRKCSH-203ENST00000586486 TAC4Q86UU9 113 aa17.7■□□□□ 0.42
PRKCSH-203ENST00000586486 CMTM8Q8IZV2 173 aa17.7■□□□□ 0.42
PRKCSH-203ENST00000586486 NIPA2Q8N8Q9 360 aa17.7■□□□□ 0.42
PRKCSH-203ENST00000586486 ING5Q8WYH8 240 aa17.7■□□□□ 0.42
PRKCSH-203ENST00000586486 FGF13Q92913 245 aa17.7■□□□□ 0.42
PRKCSH-203ENST00000586486 SLC22A12Q96S37 553 aa17.7■□□□□ 0.42
PRKCSH-203ENST00000586486 NACA2Q9H009 215 aa17.7■□□□□ 0.42
PRKCSH-203ENST00000586486 RNF38Q9H0F5 515 aa17.7■□□□□ 0.42
PRKCSH-203ENST00000586486 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.7■□□□□ 0.42
PRKCSH-203ENST00000586486 MARCH2Q9P0N8 246 aa17.7■□□□□ 0.42
PRKCSH-203ENST00000586486 TRIM10Q9UDY6 481 aa17.7■□□□□ 0.42
PRKCSH-203ENST00000586486 IP6K2Q9UHH9 426 aa17.7■□□□□ 0.42
PRKCSH-203ENST00000586486 NUDT5Q9UKK9 219 aa17.7■□□□□ 0.42
PRKCSH-203ENST00000586486 SPTBN5Q9NRC6 3674 aaKnown RBP17.7■□□□□ 0.42
PRKCSH-203ENST00000586486 MYO1FO00160 1098 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms