RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 CBFA2T3O75081 653 aa12.55□□□□□ -0.4
BRCA1-225ENST00000586385 PHACTR2O75167 634 aa12.55□□□□□ -0.4
BRCA1-225ENST00000586385 ZNF217O75362 1048 aa12.55□□□□□ -0.4
BRCA1-225ENST00000586385 TRIM16O95361 564 aa12.55□□□□□ -0.4
BRCA1-225ENST00000586385 KLKB1P03952 638 aa12.55□□□□□ -0.4
BRCA1-225ENST00000586385 ASPAP45381 313 aa12.55□□□□□ -0.4
BRCA1-225ENST00000586385 NDST1P52848 882 aa12.55□□□□□ -0.4
BRCA1-225ENST00000586385 MAP3K7CLP57077 242 aa12.55□□□□□ -0.4
BRCA1-225ENST00000586385 SCAPQ12770 1279 aa12.55□□□□□ -0.4
BRCA1-225ENST00000586385 STK38Q15208 465 aa12.55□□□□□ -0.4
BRCA1-225ENST00000586385 TRIP6Q15654 476 aaKnown RBP12.55□□□□□ -0.4
BRCA1-225ENST00000586385 ZNF423Q2M1K9 1284 aa12.55□□□□□ -0.4
BRCA1-225ENST00000586385 SPOPLQ6IQ16 392 aa12.55□□□□□ -0.4
BRCA1-225ENST00000586385 SCD5Q86SK9 330 aa12.55□□□□□ -0.4
BRCA1-225ENST00000586385 PNPLA1Q8N8W4 532 aa12.55□□□□□ -0.4
BRCA1-225ENST00000586385 ADAMTS14Q8WXS8 1223 aa12.55□□□□□ -0.4
BRCA1-225ENST00000586385 TNIP3Q96KP6 325 aa12.55□□□□□ -0.4
BRCA1-225ENST00000586385 LRRC27Q9C0I9 530 aa12.55□□□□□ -0.4
BRCA1-225ENST00000586385 MKRN2Q9H000 416 aaKnown RBP12.55□□□□□ -0.4
BRCA1-225ENST00000586385 PLK2Q9NYY3 685 aa12.55□□□□□ -0.4
BRCA1-225ENST00000586385 SCML2Q9UQR0 700 aa12.55□□□□□ -0.4
BRCA1-225ENST00000586385 GPSM3Q9Y4H4 160 aa12.55□□□□□ -0.4
BRCA1-225ENST00000586385 ATP8B3O60423 1300 aa12.55□□□□□ -0.4
BRCA1-225ENST00000586385 A0A1W2PQH9 124 aa12.54□□□□□ -0.4
BRCA1-225ENST00000586385 KCNJ18B7U540 433 aa12.54□□□□□ -0.4
BRCA1-225ENST00000586385 KLRC4O43908 158 aa12.54□□□□□ -0.4
BRCA1-225ENST00000586385 EXOC3O60645 756 aa12.54□□□□□ -0.4
BRCA1-225ENST00000586385 PPP6R2O75170 966 aa12.54□□□□□ -0.4
BRCA1-225ENST00000586385 PENKP01210 267 aaPredicted RBP12.54□□□□□ -0.4
BRCA1-225ENST00000586385 FTH1P19P0C7X4 201 aa12.54□□□□□ -0.4
BRCA1-225ENST00000586385 DGKGP49619 791 aa12.54□□□□□ -0.4
BRCA1-225ENST00000586385 GRIK2Q13002 908 aa12.54□□□□□ -0.4
BRCA1-225ENST00000586385 SLC14A1Q13336 389 aa12.54□□□□□ -0.4
BRCA1-225ENST00000586385 BIRC3Q13489 604 aa12.54□□□□□ -0.4
BRCA1-225ENST00000586385 CUL4BQ13620 913 aa12.54□□□□□ -0.4
BRCA1-225ENST00000586385 ENPP2Q13822 863 aa12.54□□□□□ -0.4
BRCA1-225ENST00000586385 ACAP1Q15027 740 aa12.54□□□□□ -0.4
BRCA1-225ENST00000586385 KNOP1Q1ED39 458 aaKnown RBP12.54□□□□□ -0.4
BRCA1-225ENST00000586385 PLEKHG6Q3KR16 790 aa12.54□□□□□ -0.4
BRCA1-225ENST00000586385 ZACNQ401N2 412 aa12.54□□□□□ -0.4
BRCA1-225ENST00000586385 FUT11Q495W5 492 aa12.54□□□□□ -0.4
BRCA1-225ENST00000586385 PREPLQ4J6C6 727 aaPredicted RBP12.54□□□□□ -0.4
BRCA1-225ENST00000586385 CLEC20AQ6ZU45 233 aa12.54□□□□□ -0.4
BRCA1-225ENST00000586385 RABEPKQ7Z6M1 372 aa12.54□□□□□ -0.4
BRCA1-225ENST00000586385 SLCO6A1Q86UG4 719 aa12.54□□□□□ -0.4
BRCA1-225ENST00000586385 NAXDQ8IW45 347 aa12.54□□□□□ -0.4
BRCA1-225ENST00000586385 GRAMD1CQ8IYS0 662 aa12.54□□□□□ -0.4
BRCA1-225ENST00000586385 RBBP8NLQ8NC74 664 aaPredicted RBP12.54□□□□□ -0.4
BRCA1-225ENST00000586385 DNASE2BQ8WZ79 361 aa12.54□□□□□ -0.4
BRCA1-225ENST00000586385 BHMTQ93088 406 aa12.54□□□□□ -0.4
BRCA1-225ENST00000586385 NACA2Q9H009 215 aa12.54□□□□□ -0.4
BRCA1-225ENST00000586385 IL21RQ9HBE5 538 aa12.54□□□□□ -0.4
BRCA1-225ENST00000586385 TLR8Q9NR97 1041 aaKnown RBP12.54□□□□□ -0.4
BRCA1-225ENST00000586385 FOXD4L1Q9NU39 408 aa12.54□□□□□ -0.4
BRCA1-225ENST00000586385 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.54□□□□□ -0.4
BRCA1-225ENST00000586385 WSB2Q9NYS7 404 aaPredicted RBP12.54□□□□□ -0.4
BRCA1-225ENST00000586385 USP36Q9P275 1121 aaKnown RBP12.54□□□□□ -0.4
BRCA1-225ENST00000586385 WDR35Q9P2L0 1181 aa12.54□□□□□ -0.4
BRCA1-225ENST00000586385 SLCO1B1Q9Y6L6 691 aa12.54□□□□□ -0.4
BRCA1-225ENST00000586385 STON1Q9Y6Q2 735 aa12.54□□□□□ -0.4
BRCA1-225ENST00000586385 ANKRD11Q6UB99 2663 aaPredicted RBP12.54□□□□□ -0.4
BRCA1-225ENST00000586385 ITPR1Q14643 2758 aa12.53□□□□□ -0.4
BRCA1-225ENST00000586385 GFRA2O00451 464 aa12.53□□□□□ -0.4
BRCA1-225ENST00000586385 STX6O43752 255 aa12.53□□□□□ -0.4
BRCA1-225ENST00000586385 STC2O76061 302 aa12.53□□□□□ -0.4
BRCA1-225ENST00000586385 ASS1P00966 412 aaKnown RBP12.53□□□□□ -0.4
BRCA1-225ENST00000586385 SYPP08247 313 aa12.53□□□□□ -0.4
BRCA1-225ENST00000586385 ADORA2BP29275 332 aa12.53□□□□□ -0.4
BRCA1-225ENST00000586385 ATP5C1P36542 298 aaKnown RBP12.53□□□□□ -0.4
BRCA1-225ENST00000586385 IL12RB1P42701 662 aa12.53□□□□□ -0.4
BRCA1-225ENST00000586385 AMPD3Q01432 767 aa12.53□□□□□ -0.4
BRCA1-225ENST00000586385 GEN1Q17RS7 908 aa12.53□□□□□ -0.4
BRCA1-225ENST00000586385 KLHDC10Q6PID8 442 aa12.53□□□□□ -0.4
BRCA1-225ENST00000586385 KIAA1324Q6UXG2 1013 aaKnown RBP12.53□□□□□ -0.4
BRCA1-225ENST00000586385 CCNI2Q6ZMN8 369 aaPredicted RBP12.53□□□□□ -0.4
BRCA1-225ENST00000586385 SV2AQ7L0J3 742 aa12.53□□□□□ -0.4
BRCA1-225ENST00000586385 METTL3Q86U44 580 aaKnown RBP12.53□□□□□ -0.4
BRCA1-225ENST00000586385 IQUBQ8NA54 791 aa12.53□□□□□ -0.4
BRCA1-225ENST00000586385 KIAA0895Q8NCT3 520 aa12.53□□□□□ -0.4
BRCA1-225ENST00000586385 C1orf216Q8TAB5 229 aa12.53□□□□□ -0.4
BRCA1-225ENST00000586385 JAKMIP2Q96AA8 810 aa12.53□□□□□ -0.4
BRCA1-225ENST00000586385 TOE1Q96GM8 510 aaKnown RBP12.53□□□□□ -0.4
BRCA1-225ENST00000586385 XPO6Q96QU8 1125 aaKnown RBP12.53□□□□□ -0.4
BRCA1-225ENST00000586385 HNRNPABQ99729 332 aaKnown RBP12.53□□□□□ -0.4
BRCA1-225ENST00000586385 KCTD10Q9H3F6 313 aa12.53□□□□□ -0.4
BRCA1-225ENST00000586385 FBXO44Q9H4M3 255 aa12.53□□□□□ -0.4
BRCA1-225ENST00000586385 ZSCAN16Q9H4T2 348 aaPredicted RBP12.53□□□□□ -0.4
BRCA1-225ENST00000586385 APOBEC3GQ9HC16 384 aaKnown RBP12.53□□□□□ -0.4
BRCA1-225ENST00000586385 CGNQ9P2M7 1197 aaKnown RBP12.53□□□□□ -0.4
BRCA1-225ENST00000586385 CLEC4EQ9ULY5 219 aa12.53□□□□□ -0.4
BRCA1-225ENST00000586385 SLC27A6Q9Y2P4 619 aa12.53□□□□□ -0.4
BRCA1-225ENST00000586385 PVALEFA0A1B0GWK0 134 aa12.52□□□□□ -0.41
BRCA1-225ENST00000586385 POLR2DO15514 142 aaKnown RBP12.52□□□□□ -0.41
BRCA1-225ENST00000586385 CUTAO60888 179 aa12.52□□□□□ -0.41
BRCA1-225ENST00000586385 FAM200BP0CF97 657 aa12.52□□□□□ -0.41
BRCA1-225ENST00000586385 RARGP13631 454 aa12.52□□□□□ -0.41
BRCA1-225ENST00000586385 ACO1P21399 889 aaKnown RBP12.52□□□□□ -0.41
BRCA1-225ENST00000586385 CD6P30203 668 aa12.52□□□□□ -0.41
BRCA1-225ENST00000586385 KIF11P52732 1056 aa12.52□□□□□ -0.41
BRCA1-225ENST00000586385 AP3M2P53677 418 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms