RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 CYP2S1Q96SQ9 504 aa14.24□□□□□ -0.13
VMP1-203ENST00000586245 PACSIN1Q9BY11 444 aa14.24□□□□□ -0.13
VMP1-203ENST00000586245 RRN3Q9NYV6 651 aa14.24□□□□□ -0.13
VMP1-203ENST00000586245 RASAL2Q9UJF2 1139 aa14.24□□□□□ -0.13
VMP1-203ENST00000586245 DNMT3LQ9UJW3 386 aa14.24□□□□□ -0.13
VMP1-203ENST00000586245 TMEM59LQ9UK28 342 aa14.24□□□□□ -0.13
VMP1-203ENST00000586245 NUDT5Q9UKK9 219 aa14.24□□□□□ -0.13
VMP1-203ENST00000586245 STAP1Q9ULZ2 295 aa14.24□□□□□ -0.13
VMP1-203ENST00000586245 NAALADL1Q9UQQ1 740 aa14.24□□□□□ -0.13
VMP1-203ENST00000586245 USTQ9Y2C2 406 aa14.24□□□□□ -0.13
VMP1-203ENST00000586245 NR2E1Q9Y466 385 aa14.24□□□□□ -0.13
VMP1-203ENST00000586245 NOTCH4Q99466 2003 aa14.24□□□□□ -0.13
VMP1-203ENST00000586245 EYSQ5T1H1 3165 aa14.24□□□□□ -0.13
VMP1-203ENST00000586245 TCRBV5S1A1TA0A578 114 aa14.23□□□□□ -0.13
VMP1-203ENST00000586245 DPYSL4O14531 572 aa14.23□□□□□ -0.13
VMP1-203ENST00000586245 GJB6O95452 261 aa14.23□□□□□ -0.13
VMP1-203ENST00000586245 TBX18O95935 607 aa14.23□□□□□ -0.13
VMP1-203ENST00000586245 FYNP06241 537 aa14.23□□□□□ -0.13
VMP1-203ENST00000586245 PDGFRAP16234 1089 aa14.23□□□□□ -0.13
VMP1-203ENST00000586245 GBP1P32455 592 aa14.23□□□□□ -0.13
VMP1-203ENST00000586245 EFEMP1Q12805 493 aa14.23□□□□□ -0.13
VMP1-203ENST00000586245 MAMLD1Q13495 774 aa14.23□□□□□ -0.13
VMP1-203ENST00000586245 MSANTD2Q6P1R3 559 aa14.23□□□□□ -0.13
VMP1-203ENST00000586245 KIAA1328Q86T90 577 aa14.23□□□□□ -0.13
VMP1-203ENST00000586245 EMC1Q8N766 993 aa14.23□□□□□ -0.13
VMP1-203ENST00000586245 ACRBPQ8NEB7 543 aa14.23□□□□□ -0.13
VMP1-203ENST00000586245 JOSD2Q8TAC2 188 aa14.23□□□□□ -0.13
VMP1-203ENST00000586245 ZSCAN18Q8TBC5 510 aaPredicted RBP14.23□□□□□ -0.13
VMP1-203ENST00000586245 ARHGEF26Q96DR7 871 aa14.23□□□□□ -0.13
VMP1-203ENST00000586245 ZSWIM3Q96MP5 696 aa14.23□□□□□ -0.13
VMP1-203ENST00000586245 DDX23Q9BUQ8 820 aaKnown RBP14.23□□□□□ -0.13
VMP1-203ENST00000586245 RNF38Q9H0F5 515 aa14.23□□□□□ -0.13
VMP1-203ENST00000586245 MARCH2Q9P0N8 246 aa14.23□□□□□ -0.13
VMP1-203ENST00000586245 CTTNBP2NLQ9P2B4 639 aa14.23□□□□□ -0.13
VMP1-203ENST00000586245 XIRP2A4UGR9 3374 aa14.22□□□□□ -0.13
VMP1-203ENST00000586245 MDM4O15151 490 aa14.22□□□□□ -0.13
VMP1-203ENST00000586245 OLFM2O95897 454 aa14.22□□□□□ -0.13
VMP1-203ENST00000586245 LAMP2P13473 410 aa14.22□□□□□ -0.13
VMP1-203ENST00000586245 GPD1P21695 349 aa14.22□□□□□ -0.13
VMP1-203ENST00000586245 SP100P23497 879 aaPredicted RBP14.22□□□□□ -0.13
VMP1-203ENST00000586245 WEE1P30291 646 aa14.22□□□□□ -0.13
VMP1-203ENST00000586245 SDC4P31431 198 aa14.22□□□□□ -0.13
VMP1-203ENST00000586245 RFC1P35251 1148 aaPredicted RBP14.22□□□□□ -0.13
VMP1-203ENST00000586245 FLT3P36888 993 aa14.22□□□□□ -0.13
VMP1-203ENST00000586245 SLC7A9P82251 487 aa14.22□□□□□ -0.13
VMP1-203ENST00000586245 COG7P83436 770 aa14.22□□□□□ -0.13
VMP1-203ENST00000586245 PPP1R15BQ5SWA1 713 aa14.22□□□□□ -0.13
VMP1-203ENST00000586245 SYPL2Q5VXT5 272 aa14.22□□□□□ -0.13
VMP1-203ENST00000586245 DDX42Q86XP3 938 aaKnown RBP eCLIP14.22□□□□□ -0.13
VMP1-203ENST00000586245 MIB1Q86YT6 1006 aa14.22□□□□□ -0.13
VMP1-203ENST00000586245 ARID3BQ8IVW6 561 aaPredicted RBP14.22□□□□□ -0.13
VMP1-203ENST00000586245 RHOT2Q8IXI1 618 aa14.22□□□□□ -0.13
VMP1-203ENST00000586245 PLCD3Q8N3E9 789 aa14.22□□□□□ -0.13
VMP1-203ENST00000586245 DQX1Q8TE96 717 aaKnown RBP14.22□□□□□ -0.13
VMP1-203ENST00000586245 ATXN2LQ8WWM7 1075 aaKnown RBP14.22□□□□□ -0.13
VMP1-203ENST00000586245 RXFP2Q8WXD0 754 aa14.22□□□□□ -0.13
VMP1-203ENST00000586245 SMARCD2Q92925 531 aa14.22□□□□□ -0.13
VMP1-203ENST00000586245 RPGRIP1Q96KN7 1286 aa14.22□□□□□ -0.13
VMP1-203ENST00000586245 ASB16Q96NS5 453 aa14.22□□□□□ -0.13
VMP1-203ENST00000586245 SERPINB11Q96P15 392 aa14.22□□□□□ -0.13
VMP1-203ENST00000586245 SLC22A12Q96S37 553 aa14.22□□□□□ -0.13
VMP1-203ENST00000586245 DESI2Q9BSY9 194 aa14.22□□□□□ -0.13
VMP1-203ENST00000586245 NUP85Q9BW27 656 aa14.22□□□□□ -0.13
VMP1-203ENST00000586245 SMOC2Q9H3U7 446 aa14.22□□□□□ -0.13
VMP1-203ENST00000586245 FAM204AQ9H8W3 233 aa14.22□□□□□ -0.13
VMP1-203ENST00000586245 KIF9Q9HAQ2 790 aa14.22□□□□□ -0.13
VMP1-203ENST00000586245 TDP1Q9NUW8 608 aa14.22□□□□□ -0.13
VMP1-203ENST00000586245 SMPD4Q9NXE4 827 aa14.22□□□□□ -0.13
VMP1-203ENST00000586245 UVRAGQ9P2Y5 699 aa14.22□□□□□ -0.13
VMP1-203ENST00000586245 EPS15L1Q9UBC2 864 aa14.22□□□□□ -0.13
VMP1-203ENST00000586245 SFMBT1Q9UHJ3 866 aa14.22□□□□□ -0.13
VMP1-203ENST00000586245 ARHGAP26Q9UNA1 814 aa14.22□□□□□ -0.13
VMP1-203ENST00000586245 CPQQ9Y646 472 aa14.22□□□□□ -0.13
VMP1-203ENST00000586245 DOCK6Q96HP0 2047 aa14.22□□□□□ -0.13
VMP1-203ENST00000586245 OBSL1O75147 1896 aa14.21□□□□□ -0.13
VMP1-203ENST00000586245 DENND4AQ7Z401 1863 aa14.21□□□□□ -0.13
VMP1-203ENST00000586245 SLC12A8A0AV02 714 aa14.21□□□□□ -0.13
VMP1-203ENST00000586245 TMEM191CA6NGB0 347 aa14.21□□□□□ -0.13
VMP1-203ENST00000586245 C2CD4BA6NLJ0 364 aa14.21□□□□□ -0.13
VMP1-203ENST00000586245 IL9P15248 144 aa14.21□□□□□ -0.13
VMP1-203ENST00000586245 SULT1E1P49888 294 aa14.21□□□□□ -0.13
VMP1-203ENST00000586245 KPNA1P52294 538 aaPredicted RBP14.21□□□□□ -0.13
VMP1-203ENST00000586245 VAV2P52735 878 aa14.21□□□□□ -0.13
VMP1-203ENST00000586245 RPL7AP62424 266 aaKnown RBP14.21□□□□□ -0.13
VMP1-203ENST00000586245 SLC25A52Q3SY17 297 aa14.21□□□□□ -0.13
VMP1-203ENST00000586245 FAM78AQ5JUQ0 283 aa14.21□□□□□ -0.13
VMP1-203ENST00000586245 MTSS1LQ765P7 747 aa14.21□□□□□ -0.13
VMP1-203ENST00000586245 TAC4Q86UU9 113 aa14.21□□□□□ -0.13
VMP1-203ENST00000586245 CELF5Q8N6W0 485 aaKnown RBP14.21□□□□□ -0.13
VMP1-203ENST00000586245 TTC16Q8NEE8 873 aa14.21□□□□□ -0.13
VMP1-203ENST00000586245 ZNF564Q8TBZ8 553 aaPredicted RBP14.21□□□□□ -0.13
VMP1-203ENST00000586245 ADAM32Q8TC27 787 aa14.21□□□□□ -0.13
VMP1-203ENST00000586245 RFFLQ8WZ73 363 aa14.21□□□□□ -0.13
VMP1-203ENST00000586245 CFAP57Q96MR6 1250 aa14.21□□□□□ -0.13
VMP1-203ENST00000586245 ZNF830Q96NB3 372 aaPredicted RBP14.21□□□□□ -0.13
VMP1-203ENST00000586245 KLF16Q9BXK1 252 aaPredicted RBP14.21□□□□□ -0.13
VMP1-203ENST00000586245 SMG9Q9H0W8 520 aaKnown RBP14.21□□□□□ -0.13
VMP1-203ENST00000586245 TRPV4Q9HBA0 871 aa14.21□□□□□ -0.13
VMP1-203ENST00000586245 ZFP14Q9HCL3 533 aa14.21□□□□□ -0.13
VMP1-203ENST00000586245 TMEM51Q9NW97 253 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms