RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 FAM228AQ86W67 206 aa12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 UNC93AQ86WB7 457 aa12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 SPATS2Q86XZ4 545 aaKnown RBP12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 MIB1Q86YT6 1006 aa12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 C12orf50Q8NA57 414 aaPredicted RBP12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 TFB1MQ8WVM0 346 aaKnown RBP12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 MAML1Q92585 1016 aa12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 KAT2BQ92831 832 aa12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 LBHD1Q9BQE6 289 aaPredicted RBP12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 PCMTD2Q9NV79 361 aa12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 PADI3Q9ULW8 664 aa12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 NFS1Q9Y697 457 aa12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 LOC102724159A0A0B4J2E5 919 aa12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 C2CD2LO14523 706 aa12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 NPR3P17342 541 aa12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 MAGEA9P43362 315 aa12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 GEMIN4P57678 1058 aaKnown RBP12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 TMPRSS15P98073 1019 aa12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 PWP2Q15269 919 aaKnown RBP12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 KCNA10Q16322 511 aa12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 CST9Q5W186 159 aa12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 OVOS1Q6IE37 1185 aa12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 POLNQ7Z5Q5 900 aa12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 ZNF467Q7Z7K2 595 aaPredicted RBP12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 STKLD1Q8NE28 680 aa12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 TBC1D31Q96DN5 1066 aa12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 PEBP4Q96S96 227 aa12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 TACO1Q9BSH4 297 aaKnown RBP12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 ETNK1Q9HBU6 452 aa12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 TRMT13Q9NUP7 481 aaKnown RBP12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 KIAA1217Q5T5P2 1943 aa12.9□□□□□ -0.34
SMARCA4-208ENST00000585799 A0A1W2PPM1 405 aa12.9□□□□□ -0.34
SMARCA4-208ENST00000585799 TCRBV7S3A2A0A539 114 aa12.9□□□□□ -0.34
SMARCA4-208ENST00000585799 TRAPPC3O43617 180 aa12.9□□□□□ -0.34
SMARCA4-208ENST00000585799 CCDC185Q8N715 623 aa12.9□□□□□ -0.34
SMARCA4-208ENST00000585799 FAM111AQ96PZ2 611 aa12.9□□□□□ -0.34
SMARCA4-208ENST00000585799 ZIC5Q96T25 663 aa12.9□□□□□ -0.34
SMARCA4-208ENST00000585799 SEPT5Q99719 369 aaPredicted RBP12.9□□□□□ -0.34
SMARCA4-208ENST00000585799 G3BP2Q9UN86 482 aaKnown RBP12.9□□□□□ -0.34
SMARCA4-208ENST00000585799 SNX10Q9Y5X0 201 aa12.9□□□□□ -0.34
SMARCA4-208ENST00000585799 ODC1P11926 461 aa12.9□□□□□ -0.34
SMARCA4-208ENST00000585799 POU5F1BQ06416 359 aa12.9□□□□□ -0.34
SMARCA4-208ENST00000585799 E2F5Q15329 346 aa12.9□□□□□ -0.34
SMARCA4-208ENST00000585799 CFAP157Q5JU67 520 aa12.9□□□□□ -0.34
SMARCA4-208ENST00000585799 FNBP1LQ5T0N5 605 aa12.9□□□□□ -0.34
SMARCA4-208ENST00000585799 SPATA21Q7Z572 469 aa12.9□□□□□ -0.34
SMARCA4-208ENST00000585799 GPR152Q8TDT2 470 aa12.9□□□□□ -0.34
SMARCA4-208ENST00000585799 SCYL1Q96KG9 808 aa12.9□□□□□ -0.34
SMARCA4-208ENST00000585799 EPAS1Q99814 870 aa12.9□□□□□ -0.34
SMARCA4-208ENST00000585799 FOXP3Q9BZS1 431 aa12.9□□□□□ -0.34
SMARCA4-208ENST00000585799 NRDE2Q9H7Z3 1164 aa12.9□□□□□ -0.34
SMARCA4-208ENST00000585799 ITGAVP06756 1048 aa12.9□□□□□ -0.34
SMARCA4-208ENST00000585799 EZRP15311 586 aaKnown RBP12.9□□□□□ -0.34
SMARCA4-208ENST00000585799 CYP3A5P20815 502 aa12.9□□□□□ -0.34
SMARCA4-208ENST00000585799 ABCG1P45844 678 aa12.9□□□□□ -0.34
SMARCA4-208ENST00000585799 AFF1P51825 1210 aaKnown RBP12.9□□□□□ -0.34
SMARCA4-208ENST00000585799 RCN2Q14257 317 aa12.9□□□□□ -0.34
SMARCA4-208ENST00000585799 GDF6Q6KF10 455 aaPredicted RBP12.9□□□□□ -0.34
SMARCA4-208ENST00000585799 RASAL3Q86YV0 1011 aa12.9□□□□□ -0.34
SMARCA4-208ENST00000585799 KIF2BQ8N4N8 673 aa12.9□□□□□ -0.34
SMARCA4-208ENST00000585799 URGCPQ8TCY9 931 aa12.9□□□□□ -0.34
SMARCA4-208ENST00000585799 CPT1BQ92523 772 aa12.9□□□□□ -0.34
SMARCA4-208ENST00000585799 ATP2A3Q93084 1043 aa12.9□□□□□ -0.34
SMARCA4-208ENST00000585799 MCRS1Q96EZ8 462 aa12.9□□□□□ -0.34
SMARCA4-208ENST00000585799 NPHS2Q9NP85 383 aa12.9□□□□□ -0.34
SMARCA4-208ENST00000585799 DRG1Q9Y295 367 aaKnown RBP12.9□□□□□ -0.34
SMARCA4-208ENST00000585799 FAM189A1O60320 539 aa12.89□□□□□ -0.35
SMARCA4-208ENST00000585799 JCHAINP01591 159 aa12.89□□□□□ -0.35
SMARCA4-208ENST00000585799 ERFP50548 548 aa12.89□□□□□ -0.35
SMARCA4-208ENST00000585799 KBTBD12Q3ZCT8 623 aa12.89□□□□□ -0.35
SMARCA4-208ENST00000585799 MAMDC4Q6UXC1 1216 aa12.89□□□□□ -0.35
SMARCA4-208ENST00000585799 OSTM1Q86WC4 334 aa12.89□□□□□ -0.35
SMARCA4-208ENST00000585799 PLD5Q8N7P1 536 aa12.89□□□□□ -0.35
SMARCA4-208ENST00000585799 ADAMTS10Q9H324 1103 aa12.89□□□□□ -0.35
SMARCA4-208ENST00000585799 PPP1R12AO14974 1030 aaPredicted RBP12.89□□□□□ -0.35
SMARCA4-208ENST00000585799 DUSP11O75319 330 aaKnown RBP12.89□□□□□ -0.35
SMARCA4-208ENST00000585799 TPH1P17752 444 aa12.89□□□□□ -0.35
SMARCA4-208ENST00000585799 PITX1P78337 314 aaPredicted RBP12.89□□□□□ -0.35
SMARCA4-208ENST00000585799 MGAT5BQ3V5L5 792 aa12.89□□□□□ -0.35
SMARCA4-208ENST00000585799 COLGALT1Q8NBJ5 622 aa12.89□□□□□ -0.35
SMARCA4-208ENST00000585799 AGR3Q8TD06 166 aa12.89□□□□□ -0.35
SMARCA4-208ENST00000585799 NSMCE1Q8WV22 266 aa12.89□□□□□ -0.35
SMARCA4-208ENST00000585799 COMMD10Q9Y6G5 202 aa12.89□□□□□ -0.35
SMARCA4-208ENST00000585799 CFAP69A5D8W1 941 aa12.89□□□□□ -0.35
SMARCA4-208ENST00000585799 KRT38O76015 456 aa12.89□□□□□ -0.35
SMARCA4-208ENST00000585799 ARL1P40616 181 aaPredicted RBP12.89□□□□□ -0.35
SMARCA4-208ENST00000585799 CORO7P57737 925 aa12.89□□□□□ -0.35
SMARCA4-208ENST00000585799 SLC25A11Q02978 314 aaKnown RBP12.89□□□□□ -0.35
SMARCA4-208ENST00000585799 NR1H3Q13133 447 aa12.89□□□□□ -0.35
SMARCA4-208ENST00000585799 PRPSAP1Q14558 356 aa12.89□□□□□ -0.35
SMARCA4-208ENST00000585799 PCSK7Q16549 785 aa12.89□□□□□ -0.35
SMARCA4-208ENST00000585799 PCDH19Q8TAB3 1148 aa12.89□□□□□ -0.35
SMARCA4-208ENST00000585799 BEGAINQ9BUH8 593 aa12.89□□□□□ -0.35
SMARCA4-208ENST00000585799 NFKBIZQ9BYH8 718 aa12.89□□□□□ -0.35
SMARCA4-208ENST00000585799 HAUS2Q9NVX0 235 aa12.89□□□□□ -0.35
SMARCA4-208ENST00000585799 BFARQ9NZS9 450 aa12.89□□□□□ -0.35
SMARCA4-208ENST00000585799 GRIN2DO15399 1336 aa12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 AOC2O75106 756 aa12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 HOXD10P28358 340 aa12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 PCK1P35558 622 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms