RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 FAM124BQ9H5Z6 455 aaPredicted RBP14.72□□□□□ -0.05
CDK5RAP3-237ENST00000585163 GPATCH2LQ9NWQ4 482 aa14.72□□□□□ -0.05
CDK5RAP3-237ENST00000585163 KAT6AQ92794 2004 aa14.72□□□□□ -0.05
CDK5RAP3-237ENST00000585163 HBP1O60381 514 aa14.72□□□□□ -0.05
CDK5RAP3-237ENST00000585163 UGT1A9O60656 530 aa14.72□□□□□ -0.05
CDK5RAP3-237ENST00000585163 PSMG1O95456 288 aa14.72□□□□□ -0.05
CDK5RAP3-237ENST00000585163 SESN3P58005 492 aa14.72□□□□□ -0.05
CDK5RAP3-237ENST00000585163 TNFAIP2Q03169 654 aa14.72□□□□□ -0.05
CDK5RAP3-237ENST00000585163 FAM187BQ17R55 369 aa14.72□□□□□ -0.05
CDK5RAP3-237ENST00000585163 SLC10A6Q3KNW5 377 aa14.72□□□□□ -0.05
CDK5RAP3-237ENST00000585163 TEX44Q53QW1 395 aa14.72□□□□□ -0.05
CDK5RAP3-237ENST00000585163 CES4AQ5XG92 561 aa14.72□□□□□ -0.05
CDK5RAP3-237ENST00000585163 CCDC110Q8TBZ0 833 aa14.72□□□□□ -0.05
CDK5RAP3-237ENST00000585163 NRG4Q8WWG1 115 aa14.72□□□□□ -0.05
CDK5RAP3-237ENST00000585163 SLC13A1Q9BZW2 595 aa14.72□□□□□ -0.05
CDK5RAP3-237ENST00000585163 SMARCAD1Q9H4L7 1026 aa14.72□□□□□ -0.05
CDK5RAP3-237ENST00000585163 UGT1A7Q9HAW7 530 aa14.72□□□□□ -0.05
CDK5RAP3-237ENST00000585163 UGT1A10Q9HAW8 530 aa14.72□□□□□ -0.05
CDK5RAP3-237ENST00000585163 UGT1A8Q9HAW9 530 aa14.72□□□□□ -0.05
CDK5RAP3-237ENST00000585163 NGRNQ9NPE2 291 aaKnown RBP14.72□□□□□ -0.05
CDK5RAP3-237ENST00000585163 PTPRFP10586 1907 aa14.72□□□□□ -0.05
CDK5RAP3-237ENST00000585163 MAP3K6O95382 1288 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 CSH1P0DML2 217 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 CSH2P0DML3 217 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 SLC34A1Q06495 639 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 CDK18Q07002 472 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 BMPR2Q13873 1038 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 PRKG1Q13976 671 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 AMHR2Q16671 573 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 OLFML1Q6UWY5 402 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 C4orf22Q6V702 233 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 ARID3BQ8IVW6 561 aaPredicted RBP14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 ARHGAP24Q8N264 748 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 RAB3IL1Q8TBN0 382 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 FAM172AQ8WUF8 416 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 ZNF670Q9BS34 389 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 SNRNP25Q9BV90 132 aaKnown RBP14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 R3HDMLQ9H3Y0 253 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 STX18Q9P2W9 335 aaKnown RBP14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 EVPLQ92817 2033 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 HMX2A2RU54 273 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 FAM159BA6NKW6 160 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 EIF4E1BA6NMX2 242 aaKnown RBP14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 A8MXQ7 604 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 CYB561D2O14569 222 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 CAPN9O14815 690 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 MDM4O15151 490 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 MAGEC1O60732 1142 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 TBX10O75333 385 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 CSDE1O75534 798 aaKnown RBP14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 LINGO3P0C6S8 592 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 PHKA2P46019 1235 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 RAP1GDS1P52306 607 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 POU5F1BQ06416 359 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 CHI3L2Q15782 390 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 CA9Q16790 459 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 ZNF534Q76KX8 674 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 TREML1Q86YW5 311 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 TMPRSS6Q8IU80 811 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 NUDCD3Q8IVD9 361 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 TTC39CQ8N584 583 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 C12orf29Q8N999 325 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 GSDMBQ8TAX9 411 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 TRPM4Q8TD43 1214 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 SLC16A10Q8TF71 515 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 FAM136AQ96C01 138 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 SIGLEC10Q96LC7 697 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 FGD4Q96M96 766 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 MPHOSPH6Q99547 160 aaKnown RBP14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 NT5C1AQ9BXI3 368 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 WWP1Q9H0M0 922 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 PDZD7Q9H5P4 517 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 GGA3Q9NZ52 723 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 PPP2R3BQ9Y5P8 575 aa14.71□□□□□ -0.05
CDK5RAP3-237ENST00000585163 SNNO75324 88 aaPredicted RBP14.7□□□□□ -0.06
CDK5RAP3-237ENST00000585163 USP2O75604 605 aaPredicted RBP14.7□□□□□ -0.06
CDK5RAP3-237ENST00000585163 STAU1O95793 577 aaKnown RBP14.7□□□□□ -0.06
CDK5RAP3-237ENST00000585163 SDC4P31431 198 aa14.7□□□□□ -0.06
CDK5RAP3-237ENST00000585163 CRHR1P34998 444 aa14.7□□□□□ -0.06
CDK5RAP3-237ENST00000585163 PGM1P36871 562 aa14.7□□□□□ -0.06
CDK5RAP3-237ENST00000585163 KLC1Q07866 573 aa14.7□□□□□ -0.06
CDK5RAP3-237ENST00000585163 TMEM132DQ14C87 1099 aa14.7□□□□□ -0.06
CDK5RAP3-237ENST00000585163 PMF1Q6P1K2 205 aa14.7□□□□□ -0.06
CDK5RAP3-237ENST00000585163 TRMT10BQ6PF06 316 aaKnown RBP14.7□□□□□ -0.06
CDK5RAP3-237ENST00000585163 SMC1BQ8NDV3 1235 aa14.7□□□□□ -0.06
CDK5RAP3-237ENST00000585163 KHSRPQ92945 711 aaKnown RBP eCLIP14.7□□□□□ -0.067e-8■■□□□ 13.1
CDK5RAP3-237ENST00000585163 STMN2Q93045 179 aa14.7□□□□□ -0.06
CDK5RAP3-237ENST00000585163 ACAP3Q96P50 834 aa14.7□□□□□ -0.06
CDK5RAP3-237ENST00000585163 EBNA1BP2Q99848 306 aaKnown RBP14.7□□□□□ -0.06
CDK5RAP3-237ENST00000585163 ITGA11Q9UKX5 1188 aa14.7□□□□□ -0.06
CDK5RAP3-237ENST00000585163 DPPA5A6NC42 116 aa14.7□□□□□ -0.06
CDK5RAP3-237ENST00000585163 ZNF487B1APH4 448 aa14.7□□□□□ -0.06
CDK5RAP3-237ENST00000585163 B2RBV5 119 aa14.7□□□□□ -0.06
CDK5RAP3-237ENST00000585163 BIRC5O15392 142 aa14.7□□□□□ -0.06
CDK5RAP3-237ENST00000585163 C22orf31O95567 290 aa14.7□□□□□ -0.06
CDK5RAP3-237ENST00000585163 METTL18O95568 372 aa14.7□□□□□ -0.06
CDK5RAP3-237ENST00000585163 PGK2P07205 417 aa14.7□□□□□ -0.06
CDK5RAP3-237ENST00000585163 PDHA1P08559 390 aa14.7□□□□□ -0.06
CDK5RAP3-237ENST00000585163 RGS7P49802 495 aa14.7□□□□□ -0.06
CDK5RAP3-237ENST00000585163 VGLL4Q14135 290 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms