RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 UBXN1Q04323 297 aa17.02■□□□□ 0.32
ERBB2-222ENST00000584908 PDCLQ13371 301 aa17.02■□□□□ 0.32
ERBB2-222ENST00000584908 LRRC32Q14392 662 aa17.02■□□□□ 0.32
ERBB2-222ENST00000584908 PON2Q15165 354 aa17.02■□□□□ 0.32
ERBB2-222ENST00000584908 DHCR24Q15392 516 aa17.02■□□□□ 0.32
ERBB2-222ENST00000584908 SYCP1Q15431 976 aa17.02■□□□□ 0.32
ERBB2-222ENST00000584908 ZSCAN23Q3MJ62 389 aa17.02■□□□□ 0.32
ERBB2-222ENST00000584908 BTBD8Q5XKL5 378 aa17.02■□□□□ 0.32
ERBB2-222ENST00000584908 MSANTD2Q6P1R3 559 aa17.02■□□□□ 0.32
ERBB2-222ENST00000584908 RHBDF2Q6PJF5 856 aa17.02■□□□□ 0.32
ERBB2-222ENST00000584908 BEND5Q7L4P6 421 aa17.02■□□□□ 0.32
ERBB2-222ENST00000584908 C1orf210Q8IVY1 113 aa17.02■□□□□ 0.32
ERBB2-222ENST00000584908 BBS7Q8IWZ6 715 aa17.02■□□□□ 0.32
ERBB2-222ENST00000584908 IRF2BPLQ9H1B7 796 aa17.02■□□□□ 0.32
ERBB2-222ENST00000584908 LMAN1LQ9HAT1 526 aa17.02■□□□□ 0.32
ERBB2-222ENST00000584908 FAM207AQ9NSI2 230 aaPredicted RBP17.02■□□□□ 0.32
ERBB2-222ENST00000584908 MARCH2Q9P0N8 246 aa17.02■□□□□ 0.32
ERBB2-222ENST00000584908 VPS13AQ96RL7 3174 aa17.02■□□□□ 0.31
ERBB2-222ENST00000584908 LTFP02788 710 aa17.01■□□□□ 0.31
ERBB2-222ENST00000584908 CYP11B1P15538 503 aa17.01■□□□□ 0.31
ERBB2-222ENST00000584908 CDH5P33151 784 aaPredicted RBP17.01■□□□□ 0.31
ERBB2-222ENST00000584908 EIF2DP41214 584 aaKnown RBP17.01■□□□□ 0.31
ERBB2-222ENST00000584908 EFEMP1Q12805 493 aa17.01■□□□□ 0.31
ERBB2-222ENST00000584908 RSRC2Q7L4I2 434 aaKnown RBP17.01■□□□□ 0.31
ERBB2-222ENST00000584908 MIB1Q86YT6 1006 aa17.01■□□□□ 0.31
ERBB2-222ENST00000584908 CLEC4CQ8WTT0 213 aa17.01■□□□□ 0.31
ERBB2-222ENST00000584908 DDX1Q92499 740 aaKnown RBP17.01■□□□□ 0.31
ERBB2-222ENST00000584908 EXOC4Q96A65 974 aa17.01■□□□□ 0.31
ERBB2-222ENST00000584908 P2RY13Q9BPV8 354 aa17.01■□□□□ 0.31
ERBB2-222ENST00000584908 RTN4Q9NQC3 1192 aaKnown RBP17.01■□□□□ 0.31
ERBB2-222ENST00000584908 ST7Q9NRC1 585 aa17.01■□□□□ 0.31
ERBB2-222ENST00000584908 LSM7Q9UK45 103 aaKnown RBP17.01■□□□□ 0.31
ERBB2-222ENST00000584908 STRIP2Q9ULQ0 834 aa17.01■□□□□ 0.31
ERBB2-222ENST00000584908 ZNF510Q9Y2H8 683 aa17.01■□□□□ 0.31
ERBB2-222ENST00000584908 E5RJQ4 531 aa17■□□□□ 0.31
ERBB2-222ENST00000584908 SCAMP3O14828 347 aaKnown RBP17■□□□□ 0.31
ERBB2-222ENST00000584908 PAPSS1O43252 624 aaPredicted RBP17■□□□□ 0.31
ERBB2-222ENST00000584908 ADH1CP00326 375 aa17■□□□□ 0.31
ERBB2-222ENST00000584908 FYNP06241 537 aa17■□□□□ 0.31
ERBB2-222ENST00000584908 IRF1P10914 325 aa17■□□□□ 0.31
ERBB2-222ENST00000584908 DRD1P21728 446 aa17■□□□□ 0.31
ERBB2-222ENST00000584908 KRT9P35527 623 aa17■□□□□ 0.31
ERBB2-222ENST00000584908 OPRD1P41143 372 aa17■□□□□ 0.31
ERBB2-222ENST00000584908 GALK1P51570 392 aa17■□□□□ 0.31
ERBB2-222ENST00000584908 POLR2FP61218 127 aaKnown RBP17■□□□□ 0.31
ERBB2-222ENST00000584908 ANGPT1Q15389 498 aa17■□□□□ 0.31
ERBB2-222ENST00000584908 LY6G5CQ5SRR4 150 aa17■□□□□ 0.31
ERBB2-222ENST00000584908 FSTL4Q6MZW2 842 aa17■□□□□ 0.31
ERBB2-222ENST00000584908 SCUBE3Q8IX30 993 aa17■□□□□ 0.31
ERBB2-222ENST00000584908 MAML2Q8IZL2 1156 aaPredicted RBP17■□□□□ 0.31
ERBB2-222ENST00000584908 EPS8L1Q8TE68 723 aa17■□□□□ 0.31
ERBB2-222ENST00000584908 CD101Q93033 1021 aa17■□□□□ 0.31
ERBB2-222ENST00000584908 PLD4Q96BZ4 506 aa17■□□□□ 0.31
ERBB2-222ENST00000584908 DCLK3Q9C098 648 aa17■□□□□ 0.31
ERBB2-222ENST00000584908 CBX8Q9HC52 389 aa17■□□□□ 0.31
ERBB2-222ENST00000584908 SPHK2Q9NRA0 654 aa17■□□□□ 0.31
ERBB2-222ENST00000584908 RASAL2Q9UJF2 1139 aa17■□□□□ 0.31
ERBB2-222ENST00000584908 HBS1LQ9Y450 684 aaKnown RBP17■□□□□ 0.31
ERBB2-222ENST00000584908 WDR87Q6ZQQ6 2873 aa17■□□□□ 0.31
ERBB2-222ENST00000584908 A0A1B0GTH6 734 aa16.99■□□□□ 0.31
ERBB2-222ENST00000584908 PIK3R2O00459 728 aa16.99■□□□□ 0.31
ERBB2-222ENST00000584908 HOXC11O43248 304 aaPredicted RBP16.99■□□□□ 0.31
ERBB2-222ENST00000584908 KLKB1P03952 638 aa16.99■□□□□ 0.31
ERBB2-222ENST00000584908 SOX5P35711 763 aa16.99■□□□□ 0.31
ERBB2-222ENST00000584908 GRSF1Q12849 480 aaKnown RBP eCLIP16.99■□□□□ 0.31
ERBB2-222ENST00000584908 GAS6Q14393 721 aa16.99■□□□□ 0.31
ERBB2-222ENST00000584908 TRIP4Q15650 581 aaPredicted RBP16.99■□□□□ 0.31
ERBB2-222ENST00000584908 ZNF677Q86XU0 584 aa16.99■□□□□ 0.31
ERBB2-222ENST00000584908 NEK11Q8NG66 645 aa16.99■□□□□ 0.31
ERBB2-222ENST00000584908 RNF139Q8WU17 664 aa16.99■□□□□ 0.31
ERBB2-222ENST00000584908 EDEM1Q92611 657 aa16.99■□□□□ 0.31
ERBB2-222ENST00000584908 PPP1R13BQ96KQ4 1090 aa16.99■□□□□ 0.31
ERBB2-222ENST00000584908 NOX5Q96PH1 765 aa16.99■□□□□ 0.31
ERBB2-222ENST00000584908 CPXM1Q96SM3 734 aa16.99■□□□□ 0.31
ERBB2-222ENST00000584908 TRIM62Q9BVG3 475 aa16.99■□□□□ 0.31
ERBB2-222ENST00000584908 MIS12Q9H081 205 aa16.99■□□□□ 0.31
ERBB2-222ENST00000584908 FBRSL1Q9HCM7 1045 aaKnown RBP16.99■□□□□ 0.31
ERBB2-222ENST00000584908 PRMT8Q9NR22 394 aaPredicted RBP16.99■□□□□ 0.31
ERBB2-222ENST00000584908 MARK1Q9P0L2 795 aa16.99■□□□□ 0.31
ERBB2-222ENST00000584908 NOCTQ9UK39 431 aaKnown RBP16.99■□□□□ 0.31
ERBB2-222ENST00000584908 FBXO4Q9UKT5 387 aa16.99■□□□□ 0.31
ERBB2-222ENST00000584908 ATG2BQ96BY7 2078 aa16.99■□□□□ 0.31
ERBB2-222ENST00000584908 A0A0A0MRY4 1105 aa16.98■□□□□ 0.31
ERBB2-222ENST00000584908 SLC12A8A0AV02 714 aa16.98■□□□□ 0.31
ERBB2-222ENST00000584908 TEX33O43247 280 aa16.98■□□□□ 0.31
ERBB2-222ENST00000584908 ADH5P11766 374 aa16.98■□□□□ 0.31
ERBB2-222ENST00000584908 NHLH1Q02575 133 aa16.98■□□□□ 0.31
ERBB2-222ENST00000584908 GAD2Q05329 585 aa16.98■□□□□ 0.31
ERBB2-222ENST00000584908 MTAPQ13126 283 aa16.98■□□□□ 0.31
ERBB2-222ENST00000584908 FBXO43Q4G163 708 aa16.98■□□□□ 0.31
ERBB2-222ENST00000584908 NAIF1Q69YI7 327 aaPredicted RBP16.98■□□□□ 0.31
ERBB2-222ENST00000584908 NOP9Q86U38 636 aaKnown RBP16.98■□□□□ 0.31
ERBB2-222ENST00000584908 FMNL3Q8IVF7 1028 aa16.98■□□□□ 0.31
ERBB2-222ENST00000584908 ETFBKMTQ8IXQ9 262 aa16.98■□□□□ 0.31
ERBB2-222ENST00000584908 FAM217AQ8IXS0 508 aa16.98■□□□□ 0.31
ERBB2-222ENST00000584908 SPEM1Q8N4L4 309 aa16.98■□□□□ 0.31
ERBB2-222ENST00000584908 C1orf131Q8NDD1 294 aaKnown RBP16.98■□□□□ 0.31
ERBB2-222ENST00000584908 EZH1Q92800 747 aaPredicted RBP16.98■□□□□ 0.31
ERBB2-222ENST00000584908 GOLGA1Q92805 767 aa16.98■□□□□ 0.31
ERBB2-222ENST00000584908 NLRC4Q9NPP4 1024 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms