RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 KIAA1324Q6UXG2 1013 aaKnown RBP12.17□□□□□ -0.46
NUP85-224ENST00000583948 NELFCDQ8IXH7 590 aa12.17□□□□□ -0.46
NUP85-224ENST00000583948 DRC7Q8IY82 874 aa12.17□□□□□ -0.46
NUP85-224ENST00000583948 GUF1Q8N442 669 aaKnown RBP12.17□□□□□ -0.46
NUP85-224ENST00000583948 PDCD7Q8N8D1 485 aaKnown RBP12.17□□□□□ -0.46
NUP85-224ENST00000583948 IPO4Q8TEX9 1081 aaKnown RBP12.17□□□□□ -0.46
NUP85-224ENST00000583948 NAF1Q96HR8 494 aaKnown RBP12.17□□□□□ -0.46
NUP85-224ENST00000583948 PPP1R9BQ96SB3 815 aa12.17□□□□□ -0.46
NUP85-224ENST00000583948 PKMYT1Q99640 499 aa12.17□□□□□ -0.46
NUP85-224ENST00000583948 TSG101Q99816 390 aa12.17□□□□□ -0.46
NUP85-224ENST00000583948 GPR174Q9BXC1 333 aa12.17□□□□□ -0.46
NUP85-224ENST00000583948 FGFBP2Q9BYJ0 223 aa12.17□□□□□ -0.46
NUP85-224ENST00000583948 TRIM4Q9C037 500 aa12.17□□□□□ -0.46
NUP85-224ENST00000583948 MRPL44Q9H9J2 332 aaKnown RBP12.17□□□□□ -0.46
NUP85-224ENST00000583948 PARVGQ9HBI0 331 aa12.17□□□□□ -0.46
NUP85-224ENST00000583948 SAMSN1Q9NSI8 373 aaKnown RBP12.17□□□□□ -0.46
NUP85-224ENST00000583948 IFNKQ9P0W0 207 aa12.17□□□□□ -0.46
NUP85-224ENST00000583948 ODF2LQ9ULJ1 636 aa12.17□□□□□ -0.46
NUP85-224ENST00000583948 L1RE1Q9UN81 338 aa12.17□□□□□ -0.46
NUP85-224ENST00000583948 KNTC1P50748 2209 aa12.17□□□□□ -0.46
NUP85-224ENST00000583948 ANKRD63C9JTQ0 380 aa12.16□□□□□ -0.46
NUP85-224ENST00000583948 TULP3O75386 442 aa12.16□□□□□ -0.46
NUP85-224ENST00000583948 KIF20AO95235 890 aa12.16□□□□□ -0.46
NUP85-224ENST00000583948 GCNT3O95395 438 aa12.16□□□□□ -0.46
NUP85-224ENST00000583948 DPP6P42658 865 aa12.16□□□□□ -0.46
NUP85-224ENST00000583948 TNFRSF4P43489 277 aa12.16□□□□□ -0.46
NUP85-224ENST00000583948 PMS1P54277 932 aaKnown RBP12.16□□□□□ -0.46
NUP85-224ENST00000583948 TMEM132DQ14C87 1099 aa12.16□□□□□ -0.46
NUP85-224ENST00000583948 SMAD1Q15797 465 aaKnown RBP12.16□□□□□ -0.46
NUP85-224ENST00000583948 PRAMEF14Q5SWL7 426 aa12.16□□□□□ -0.46
NUP85-224ENST00000583948 TMEM25Q86YD3 366 aa12.16□□□□□ -0.46
NUP85-224ENST00000583948 CREBRFQ8IUR6 639 aa12.16□□□□□ -0.46
NUP85-224ENST00000583948 DCP1BQ8IZD4 617 aaKnown RBP12.16□□□□□ -0.46
NUP85-224ENST00000583948 PDCL2Q8N4E4 241 aa12.16□□□□□ -0.46
NUP85-224ENST00000583948 ZSWIM2Q8NEG5 633 aa12.16□□□□□ -0.46
NUP85-224ENST00000583948 C2orf15Q8WU43 125 aaKnown RBP12.16□□□□□ -0.46
NUP85-224ENST00000583948 TRMT2BQ96GJ1 504 aaKnown RBP12.16□□□□□ -0.46
NUP85-224ENST00000583948 TOE1Q96GM8 510 aaKnown RBP12.16□□□□□ -0.46
NUP85-224ENST00000583948 MYRFLQ96LU7 910 aa12.16□□□□□ -0.46
NUP85-224ENST00000583948 HSD3B7Q9H2F3 369 aa12.16□□□□□ -0.46
NUP85-224ENST00000583948 DPP3Q9NY33 737 aa12.16□□□□□ -0.46
NUP85-224ENST00000583948 SNX11Q9Y5W9 270 aa12.16□□□□□ -0.46
NUP85-224ENST00000583948 AK5Q9Y6K8 562 aa12.16□□□□□ -0.46
NUP85-224ENST00000583948 A0A0A0MRY4 1105 aa12.15□□□□□ -0.46
NUP85-224ENST00000583948 MEI4A8MW99 385 aa12.15□□□□□ -0.46
NUP85-224ENST00000583948 PRRT4C9JH25 899 aa12.15□□□□□ -0.46
NUP85-224ENST00000583948 CBFA2T2O43439 604 aa12.15□□□□□ -0.46
NUP85-224ENST00000583948 HLA-EP13747 358 aa12.15□□□□□ -0.46
NUP85-224ENST00000583948 MATKP42679 507 aa12.15□□□□□ -0.46
NUP85-224ENST00000583948 TAF6P49848 677 aa12.15□□□□□ -0.46
NUP85-224ENST00000583948 CASP5P51878 434 aa12.15□□□□□ -0.46
NUP85-224ENST00000583948 PSMC1P62191 440 aaKnown RBP12.15□□□□□ -0.46
NUP85-224ENST00000583948 KCNC4Q03721 635 aa12.15□□□□□ -0.46
NUP85-224ENST00000583948 IFRD2Q12894 506 aaPredicted RBP12.15□□□□□ -0.46
NUP85-224ENST00000583948 DNAJC3Q13217 504 aa12.15□□□□□ -0.46
NUP85-224ENST00000583948 PTPRNQ16849 979 aa12.15□□□□□ -0.46
NUP85-224ENST00000583948 DCAF12L1Q5VU92 463 aa12.15□□□□□ -0.46
NUP85-224ENST00000583948 ANKRD40Q6AI12 368 aa12.15□□□□□ -0.46
NUP85-224ENST00000583948 TTI2Q6NXR4 508 aa12.15□□□□□ -0.46
NUP85-224ENST00000583948 CSGALNACT2Q8N6G5 542 aa12.15□□□□□ -0.46
NUP85-224ENST00000583948 SPC24Q8NBT2 197 aa12.15□□□□□ -0.46
NUP85-224ENST00000583948 CCDC26Q8TAB7 109 aa12.15□□□□□ -0.46
NUP85-224ENST00000583948 P2RY11Q96G91 374 aa12.15□□□□□ -0.46
NUP85-224ENST00000583948 PDLIM2Q96JY6 352 aa12.15□□□□□ -0.46
NUP85-224ENST00000583948 MRGPRX1Q96LB2 322 aa12.15□□□□□ -0.46
NUP85-224ENST00000583948 DRC1Q96MC2 740 aa12.15□□□□□ -0.46
NUP85-224ENST00000583948 TIPINQ9BVW5 301 aa12.15□□□□□ -0.46
NUP85-224ENST00000583948 SRRTQ9BXP5 876 aaKnown RBP12.15□□□□□ -0.46
NUP85-224ENST00000583948 CPNE5Q9HCH3 593 aa12.15□□□□□ -0.46
NUP85-224ENST00000583948 DDX43Q9NXZ2 648 aaKnown RBP12.15□□□□□ -0.46
NUP85-224ENST00000583948 MAGEC2Q9UBF1 373 aaPredicted RBP12.15□□□□□ -0.46
NUP85-224ENST00000583948 SEL1LQ9UBV2 794 aa12.15□□□□□ -0.46
NUP85-224ENST00000583948 EIF2B4Q9UI10 523 aaKnown RBP12.15□□□□□ -0.46
NUP85-224ENST00000583948 ZMYM5Q9UJ78 669 aa12.15□□□□□ -0.46
NUP85-224ENST00000583948 CPSF3Q9UKF6 684 aaKnown RBP12.15□□□□□ -0.46
NUP85-224ENST00000583948 COL6A6A6NMZ7 2263 aa12.14□□□□□ -0.47
NUP85-224ENST00000583948 BOD1L1Q8NFC6 3051 aa12.14□□□□□ -0.47
NUP85-224ENST00000583948 UTP20O75691 2785 aaKnown RBP12.14□□□□□ -0.47
NUP85-224ENST00000583948 A0A1B0GTW7 788 aa12.14□□□□□ -0.47
NUP85-224ENST00000583948 KPNA7A9QM74 516 aa12.14□□□□□ -0.47
NUP85-224ENST00000583948 K7ENM7 598 aa12.14□□□□□ -0.47
NUP85-224ENST00000583948 OGTO15294 1046 aa12.14□□□□□ -0.47
NUP85-224ENST00000583948 PRPF6O94906 941 aaKnown RBP12.14□□□□□ -0.47
NUP85-224ENST00000583948 ADRB2P07550 413 aa12.14□□□□□ -0.47
NUP85-224ENST00000583948 IRF1P10914 325 aa12.14□□□□□ -0.47
NUP85-224ENST00000583948 NCAM1P13591 858 aa12.14□□□□□ -0.47
NUP85-224ENST00000583948 PLS3P13797 630 aa12.14□□□□□ -0.47
NUP85-224ENST00000583948 ZNF18P17022 549 aa12.14□□□□□ -0.47
NUP85-224ENST00000583948 NTSR1P30989 418 aa12.14□□□□□ -0.47
NUP85-224ENST00000583948 GRIK1P39086 918 aa12.14□□□□□ -0.47
NUP85-224ENST00000583948 LIG4P49917 911 aa12.14□□□□□ -0.47
NUP85-224ENST00000583948 ZNF131P52739 623 aa12.14□□□□□ -0.47
NUP85-224ENST00000583948 CACNA2D1P54289 1103 aa12.14□□□□□ -0.47
NUP85-224ENST00000583948 UBASH3AP57075 661 aa12.14□□□□□ -0.47
NUP85-224ENST00000583948 KIF19Q2TAC6 998 aa12.14□□□□□ -0.47
NUP85-224ENST00000583948 ANO4Q32M45 955 aa12.14□□□□□ -0.47
NUP85-224ENST00000583948 TAF1BQ53T94 588 aaPredicted RBP12.14□□□□□ -0.47
NUP85-224ENST00000583948 INTS6LQ5JSJ4 861 aaKnown RBP12.14□□□□□ -0.47
NUP85-224ENST00000583948 CDKAL1Q5VV42 579 aa12.14□□□□□ -0.47
NUP85-224ENST00000583948 ZPBP2Q6X784 338 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms