RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 TBC1D14Q9P2M4 693 aa9.74□□□□□ -0.85
UBBP4-201ENST00000583708 SLC12A6Q9UHW9 1150 aa9.74□□□□□ -0.85
UBBP4-201ENST00000583708 TMEM59LQ9UK28 342 aa9.74□□□□□ -0.85
UBBP4-201ENST00000583708 A0A0A6YYK5 440 aaPredicted RBP9.73□□□□□ -0.85
UBBP4-201ENST00000583708 TCRBV5S1A1TA0A578 114 aa9.73□□□□□ -0.85
UBBP4-201ENST00000583708 C19orf67A6NJJ6 358 aa9.73□□□□□ -0.85
UBBP4-201ENST00000583708 BTNL10A8MVZ5 291 aa9.73□□□□□ -0.85
UBBP4-201ENST00000583708 COCHO43405 550 aa9.73□□□□□ -0.85
UBBP4-201ENST00000583708 TADA3O75528 432 aa9.73□□□□□ -0.85
UBBP4-201ENST00000583708 PLEKP08567 350 aaPredicted RBP9.73□□□□□ -0.85
UBBP4-201ENST00000583708 BMP1P13497 986 aa9.73□□□□□ -0.85
UBBP4-201ENST00000583708 NCAM1P13591 858 aa9.73□□□□□ -0.85
UBBP4-201ENST00000583708 CEBPBP17676 345 aa9.73□□□□□ -0.85
UBBP4-201ENST00000583708 ARHGAP25P42331 645 aa9.73□□□□□ -0.85
UBBP4-201ENST00000583708 MAGEA1P43355 309 aa9.73□□□□□ -0.85
UBBP4-201ENST00000583708 GALCP54803 685 aa9.73□□□□□ -0.85
UBBP4-201ENST00000583708 AIF1P55008 147 aa9.73□□□□□ -0.85
UBBP4-201ENST00000583708 HADHBP55084 474 aaKnown RBP9.73□□□□□ -0.85
UBBP4-201ENST00000583708 NTHL1P78549 312 aa9.73□□□□□ -0.85
UBBP4-201ENST00000583708 IFRD2Q12894 506 aaPredicted RBP9.73□□□□□ -0.85
UBBP4-201ENST00000583708 MAMLD1Q13495 774 aa9.73□□□□□ -0.85
UBBP4-201ENST00000583708 PIGHQ14442 188 aaPredicted RBP9.73□□□□□ -0.85
UBBP4-201ENST00000583708 TRIP4Q15650 581 aaPredicted RBP9.73□□□□□ -0.85
UBBP4-201ENST00000583708 CLUL1Q15846 466 aa9.73□□□□□ -0.85
UBBP4-201ENST00000583708 IFI16Q16666 785 aaKnown RBP9.73□□□□□ -0.85
UBBP4-201ENST00000583708 DCAF6Q58WW2 860 aa9.73□□□□□ -0.85
UBBP4-201ENST00000583708 TJAP1Q5JTD0 557 aa9.73□□□□□ -0.85
UBBP4-201ENST00000583708 PPP1R15BQ5SWA1 713 aa9.73□□□□□ -0.85
UBBP4-201ENST00000583708 FAM102AQ5T9C2 384 aaPredicted RBP9.73□□□□□ -0.85
UBBP4-201ENST00000583708 NUGGCQ68CJ6 796 aa9.73□□□□□ -0.85
UBBP4-201ENST00000583708 TXNDC8Q6A555 127 aa9.73□□□□□ -0.85
UBBP4-201ENST00000583708 DCUN1D2Q6PH85 259 aa9.73□□□□□ -0.85
UBBP4-201ENST00000583708 C1orf228Q6PIY5 440 aa9.73□□□□□ -0.85
UBBP4-201ENST00000583708 ZNF662Q6ZS27 426 aa9.73□□□□□ -0.85
UBBP4-201ENST00000583708 HTR3DQ70Z44 454 aa9.73□□□□□ -0.85
UBBP4-201ENST00000583708 SND1Q7KZF4 910 aaKnown RBP eCLIP9.73□□□□□ -0.85
UBBP4-201ENST00000583708 GET4Q7L5D6 327 aaPredicted RBP9.73□□□□□ -0.85
UBBP4-201ENST00000583708 STRADAQ7RTN6 431 aa9.73□□□□□ -0.85
UBBP4-201ENST00000583708 MFSD6LQ8IWD5 586 aa9.73□□□□□ -0.85
UBBP4-201ENST00000583708 ZSCAN18Q8TBC5 510 aaPredicted RBP9.73□□□□□ -0.85
UBBP4-201ENST00000583708 FEZF2Q8TBJ5 459 aa9.73□□□□□ -0.85
UBBP4-201ENST00000583708 KHSRPQ92945 711 aaKnown RBP eCLIP9.73□□□□□ -0.85
UBBP4-201ENST00000583708 MYADMQ96S97 322 aa9.73□□□□□ -0.85
UBBP4-201ENST00000583708 C11orf70Q9BRQ4 267 aa9.73□□□□□ -0.85
UBBP4-201ENST00000583708 CNPY3Q9BT09 278 aa9.73□□□□□ -0.85
UBBP4-201ENST00000583708 APOL5Q9BWW9 433 aa9.73□□□□□ -0.85
UBBP4-201ENST00000583708 KLF16Q9BXK1 252 aaPredicted RBP9.73□□□□□ -0.85
UBBP4-201ENST00000583708 RETREG1Q9H6L5 497 aa9.73□□□□□ -0.85
UBBP4-201ENST00000583708 CNOT8Q9UFF9 292 aaKnown RBP9.73□□□□□ -0.85
UBBP4-201ENST00000583708 LSM7Q9UK45 103 aaKnown RBP9.73□□□□□ -0.85
UBBP4-201ENST00000583708 TLR6Q9Y2C9 796 aa9.73□□□□□ -0.85
UBBP4-201ENST00000583708 MYH10P35580 1976 aa9.72□□□□□ -0.85
UBBP4-201ENST00000583708 TMEM191CA6NGB0 347 aa9.72□□□□□ -0.85
UBBP4-201ENST00000583708 C2CD4BA6NLJ0 364 aa9.72□□□□□ -0.85
UBBP4-201ENST00000583708 MTA2O94776 668 aa9.72□□□□□ -0.85
UBBP4-201ENST00000583708 IGLV3-25P01717 112 aa9.72□□□□□ -0.85
UBBP4-201ENST00000583708 FYNP06241 537 aa9.72□□□□□ -0.85
UBBP4-201ENST00000583708 PTMAP06454 111 aaKnown RBP9.72□□□□□ -0.85
UBBP4-201ENST00000583708 MBL2P11226 248 aaPredicted RBP9.72□□□□□ -0.85
UBBP4-201ENST00000583708 GLULP15104 373 aa9.72□□□□□ -0.85
UBBP4-201ENST00000583708 PDGFRAP16234 1089 aa9.72□□□□□ -0.85
UBBP4-201ENST00000583708 RRM1P23921 792 aa9.72□□□□□ -0.85
UBBP4-201ENST00000583708 SDC4P31431 198 aa9.72□□□□□ -0.85
UBBP4-201ENST00000583708 CCR1P32246 355 aa9.72□□□□□ -0.85
UBBP4-201ENST00000583708 SSTR3P32745 418 aaPredicted RBP9.72□□□□□ -0.85
UBBP4-201ENST00000583708 HARS2P49590 506 aaKnown RBP9.72□□□□□ -0.85
UBBP4-201ENST00000583708 ZNF135P52742 658 aaPredicted RBP9.72□□□□□ -0.85
UBBP4-201ENST00000583708 ZNF143P52747 638 aaPredicted RBP9.72□□□□□ -0.85
UBBP4-201ENST00000583708 CYP4F8P98187 520 aa9.72□□□□□ -0.85
UBBP4-201ENST00000583708 AMPD2Q01433 879 aa9.72□□□□□ -0.85
UBBP4-201ENST00000583708 PFKPQ01813 784 aa9.72□□□□□ -0.85
UBBP4-201ENST00000583708 GFPT1Q06210 699 aaPredicted RBP9.72□□□□□ -0.85
UBBP4-201ENST00000583708 FCHO2Q0JRZ9 810 aa9.72□□□□□ -0.85
UBBP4-201ENST00000583708 EIF4EBP2Q13542 120 aaPredicted RBP9.72□□□□□ -0.85
UBBP4-201ENST00000583708 PPP2R5DQ14738 602 aa9.72□□□□□ -0.85
UBBP4-201ENST00000583708 PDGFRLQ15198 375 aa9.72□□□□□ -0.85
UBBP4-201ENST00000583708 ARHGAP29Q52LW3 1261 aa9.72□□□□□ -0.85
UBBP4-201ENST00000583708 FAM78AQ5JUQ0 283 aa9.72□□□□□ -0.85
UBBP4-201ENST00000583708 BRMS1LQ5PSV4 323 aa9.72□□□□□ -0.85
UBBP4-201ENST00000583708 CC2D1AQ6P1N0 951 aaPredicted RBP9.72□□□□□ -0.85
UBBP4-201ENST00000583708 PSTKQ8IV42 348 aaKnown RBP9.72□□□□□ -0.85
UBBP4-201ENST00000583708 DEFB106AQ8N104 65 aa9.72□□□□□ -0.85
UBBP4-201ENST00000583708 ARL14EPQ8N8R7 260 aaPredicted RBP9.72□□□□□ -0.85
UBBP4-201ENST00000583708 CENPIQ92674 756 aaPredicted RBP9.72□□□□□ -0.85
UBBP4-201ENST00000583708 EXOC4Q96A65 974 aa9.72□□□□□ -0.85
UBBP4-201ENST00000583708 ZNF653Q96CK0 615 aa9.72□□□□□ -0.85
UBBP4-201ENST00000583708 MSANTD3Q96H12 275 aa9.72□□□□□ -0.85
UBBP4-201ENST00000583708 NPY6RQ99463 290 aa9.72□□□□□ -0.85
UBBP4-201ENST00000583708 TSGA10Q9BZW7 698 aa9.72□□□□□ -0.85
UBBP4-201ENST00000583708 RNF38Q9H0F5 515 aa9.72□□□□□ -0.85
UBBP4-201ENST00000583708 TRPC7Q9HCX4 862 aa9.72□□□□□ -0.85
UBBP4-201ENST00000583708 OSER1Q9NX31 292 aa9.72□□□□□ -0.85
UBBP4-201ENST00000583708 IP6K2Q9UHH9 426 aa9.72□□□□□ -0.85
UBBP4-201ENST00000583708 PCDHA13Q9Y5I0 950 aa9.72□□□□□ -0.85
UBBP4-201ENST00000583708 GREB1Q4ZG55 1949 aa9.72□□□□□ -0.85
UBBP4-201ENST00000583708 PATJQ8NI35 1801 aa9.71□□□□□ -0.85
UBBP4-201ENST00000583708 C2orf78A6NCI8 922 aa9.71□□□□□ -0.86
UBBP4-201ENST00000583708 TMCO5BA8MYB1 307 aa9.71□□□□□ -0.86
UBBP4-201ENST00000583708 MYO1FO00160 1098 aa9.71□□□□□ -0.86
UBBP4-201ENST00000583708 CHADO15335 359 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms