RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 DCDC5Q6ZRR9 648 aa4.26□□□□□ -1.73
VAPA-206ENST00000583475 DPP9Q86TI2 863 aa4.26□□□□□ -1.73
VAPA-206ENST00000583475 NGDNQ8NEJ9 315 aaKnown RBP4.26□□□□□ -1.73
VAPA-206ENST00000583475 BRI3BPQ8WY22 251 aa4.26□□□□□ -1.73
VAPA-206ENST00000583475 WDR24Q96S15 920 aa4.26□□□□□ -1.73
VAPA-206ENST00000583475 VPS45Q9NRW7 570 aa4.26□□□□□ -1.73
VAPA-206ENST00000583475 SEMA5BQ9P283 1151 aa4.26□□□□□ -1.73
VAPA-206ENST00000583475 ZNF70Q9UC06 446 aaPredicted RBP4.26□□□□□ -1.73
VAPA-206ENST00000583475 FZD4Q9ULV1 537 aa4.26□□□□□ -1.73
VAPA-206ENST00000583475 SCAF8Q9UPN6 1271 aaKnown RBP4.26□□□□□ -1.73
VAPA-206ENST00000583475 MAN2B2Q9Y2E5 1009 aa4.26□□□□□ -1.73
VAPA-206ENST00000583475 TMEM232C9JQI7 657 aa4.25□□□□□ -1.73
VAPA-206ENST00000583475 FYB1O15117 783 aa4.25□□□□□ -1.73
VAPA-206ENST00000583475 NCK2O43639 380 aa4.25□□□□□ -1.73
VAPA-206ENST00000583475 BCAR3O75815 825 aa4.25□□□□□ -1.73
VAPA-206ENST00000583475 FGF18O76093 207 aa4.25□□□□□ -1.73
VAPA-206ENST00000583475 NDST3O95803 873 aa4.25□□□□□ -1.73
VAPA-206ENST00000583475 MBPP02686 304 aaPredicted RBP4.25□□□□□ -1.73
VAPA-206ENST00000583475 HARSP12081 509 aaKnown RBP4.25□□□□□ -1.73
VAPA-206ENST00000583475 TNFSF4P23510 183 aa4.25□□□□□ -1.73
VAPA-206ENST00000583475 YY1P25490 414 aa4.25□□□□□ -1.73
VAPA-206ENST00000583475 ZNF81P51508 661 aa4.25□□□□□ -1.73
VAPA-206ENST00000583475 KCNJ12Q14500 433 aa4.25□□□□□ -1.73
VAPA-206ENST00000583475 MFSD13AQ14CX5 517 aa4.25□□□□□ -1.73
VAPA-206ENST00000583475 SEC23BQ15437 767 aa4.25□□□□□ -1.73
VAPA-206ENST00000583475 FAXCQ5TGI0 409 aa4.25□□□□□ -1.73
VAPA-206ENST00000583475 IL31Q6EBC2 164 aa4.25□□□□□ -1.73
VAPA-206ENST00000583475 MIS18BP1Q6P0N0 1132 aa4.25□□□□□ -1.73
VAPA-206ENST00000583475 SLC2A7Q6PXP3 512 aa4.25□□□□□ -1.73
VAPA-206ENST00000583475 USP17L6PQ6QN14 398 aa4.25□□□□□ -1.73
VAPA-206ENST00000583475 RANBP10Q6VN20 620 aa4.25□□□□□ -1.73
VAPA-206ENST00000583475 CCDC28AQ8IWP9 274 aa4.25□□□□□ -1.73
VAPA-206ENST00000583475 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.25□□□□□ -1.73
VAPA-206ENST00000583475 FAM71DQ8N9W8 422 aa4.25□□□□□ -1.73
VAPA-206ENST00000583475 GLIS1Q8NBF1 620 aa4.25□□□□□ -1.73
VAPA-206ENST00000583475 CCDC150Q8NCX0 1101 aa4.25□□□□□ -1.73
VAPA-206ENST00000583475 PARD3BQ8TEW8 1205 aa4.25□□□□□ -1.73
VAPA-206ENST00000583475 ABHD5Q8WTS1 349 aa4.25□□□□□ -1.73
VAPA-206ENST00000583475 SNX27Q96L92 541 aa4.25□□□□□ -1.73
VAPA-206ENST00000583475 RIPOR3Q96MK2 946 aa4.25□□□□□ -1.73
VAPA-206ENST00000583475 EFHD1Q9BUP0 239 aa4.25□□□□□ -1.73
VAPA-206ENST00000583475 PRSS22Q9GZN4 317 aa4.25□□□□□ -1.73
VAPA-206ENST00000583475 SAP30LQ9HAJ7 183 aa4.25□□□□□ -1.73
VAPA-206ENST00000583475 USP29Q9HBJ7 922 aa4.25□□□□□ -1.73
VAPA-206ENST00000583475 TMEM8AQ9HCN3 771 aa4.25□□□□□ -1.73
VAPA-206ENST00000583475 TMOD4Q9NZQ9 345 aa4.25□□□□□ -1.73
VAPA-206ENST00000583475 KLHL13Q9P2N7 655 aa4.25□□□□□ -1.73
VAPA-206ENST00000583475 RASA4BC9J798 803 aa4.24□□□□□ -1.73
VAPA-206ENST00000583475 TP73O15350 636 aa4.24□□□□□ -1.73
VAPA-206ENST00000583475 RASA4O43374 803 aa4.24□□□□□ -1.73
VAPA-206ENST00000583475 PRC1O43663 620 aa4.24□□□□□ -1.73
VAPA-206ENST00000583475 CCNT2O60583 730 aaKnown RBP4.24□□□□□ -1.73
VAPA-206ENST00000583475 KRT18P05783 430 aaKnown RBP4.24□□□□□ -1.73
VAPA-206ENST00000583475 TMIGD3P0DMS9 266 aaPredicted RBP4.24□□□□□ -1.73
VAPA-206ENST00000583475 ATP5F1P24539 256 aaPredicted RBP4.24□□□□□ -1.73
VAPA-206ENST00000583475 LMO1P25800 156 aa4.24□□□□□ -1.73
VAPA-206ENST00000583475 MST1P26927 711 aa4.24□□□□□ -1.73
VAPA-206ENST00000583475 SLC5A2P31639 672 aa4.24□□□□□ -1.73
VAPA-206ENST00000583475 ARHGAP25P42331 645 aa4.24□□□□□ -1.73
VAPA-206ENST00000583475 GPS1Q13098 491 aa4.24□□□□□ -1.73
VAPA-206ENST00000583475 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.24□□□□□ -1.73
VAPA-206ENST00000583475 MORN5Q5VZ52 161 aa4.24□□□□□ -1.73
VAPA-206ENST00000583475 MRNIPQ6NTE8 343 aa4.24□□□□□ -1.73
VAPA-206ENST00000583475 C11orf87Q6NUJ2 197 aa4.24□□□□□ -1.73
VAPA-206ENST00000583475 KRT73Q86Y46 540 aa4.24□□□□□ -1.73
VAPA-206ENST00000583475 TXLNBQ8N3L3 684 aa4.24□□□□□ -1.73
VAPA-206ENST00000583475 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.24□□□□□ -1.73
VAPA-206ENST00000583475 CCDC136Q96JN2 1154 aa4.24□□□□□ -1.73
VAPA-206ENST00000583475 HS6ST2Q96MM7 605 aa4.24□□□□□ -1.73
VAPA-206ENST00000583475 PCDHAC1Q9H158 963 aa4.24□□□□□ -1.73
VAPA-206ENST00000583475 NRIP3Q9NQ35 241 aa4.24□□□□□ -1.73
VAPA-206ENST00000583475 RGL1Q9NZL6 768 aa4.24□□□□□ -1.73
VAPA-206ENST00000583475 FNIP2Q9P278 1114 aa4.24□□□□□ -1.73
VAPA-206ENST00000583475 RNF7Q9UBF6 113 aa4.24□□□□□ -1.73
VAPA-206ENST00000583475 PHTF1Q9UMS5 762 aa4.24□□□□□ -1.73
VAPA-206ENST00000583475 CCDC180Q9P1Z9 1646 aa4.24□□□□□ -1.73
VAPA-206ENST00000583475 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.23□□□□□ -1.73
VAPA-206ENST00000583475 OR2W5A6NFC9 320 aa4.23□□□□□ -1.73
VAPA-206ENST00000583475 KCNU1A8MYU2 1149 aa4.23□□□□□ -1.73
VAPA-206ENST00000583475 MYL1P05976 194 aa4.23□□□□□ -1.73
VAPA-206ENST00000583475 EGR1P18146 543 aa4.23□□□□□ -1.73
VAPA-206ENST00000583475 GALNSP34059 522 aa4.23□□□□□ -1.73
VAPA-206ENST00000583475 AK2P54819 239 aa4.23□□□□□ -1.73
VAPA-206ENST00000583475 TBX4P57082 545 aa4.23□□□□□ -1.73
VAPA-206ENST00000583475 TXNL4AP83876 142 aaKnown RBP4.23□□□□□ -1.73
VAPA-206ENST00000583475 CCDC15Q0P6D6 951 aa4.23□□□□□ -1.73
VAPA-206ENST00000583475 SLC14A1Q13336 389 aa4.23□□□□□ -1.73
VAPA-206ENST00000583475 PMS2P11Q13670 270 aa4.23□□□□□ -1.73
VAPA-206ENST00000583475 ATP1A4Q13733 1029 aa4.23□□□□□ -1.73
VAPA-206ENST00000583475 KLF9Q13886 244 aaPredicted RBP4.23□□□□□ -1.73
VAPA-206ENST00000583475 KCNB1Q14721 858 aa4.23□□□□□ -1.73
VAPA-206ENST00000583475 LONRF1Q17RB8 773 aa4.23□□□□□ -1.73
VAPA-206ENST00000583475 SLC35G1Q2M3R5 365 aa4.23□□□□□ -1.73
VAPA-206ENST00000583475 TMTC4Q5T4D3 741 aa4.23□□□□□ -1.73
VAPA-206ENST00000583475 FAM90A2PQ658T7 463 aa4.23□□□□□ -1.73
VAPA-206ENST00000583475 VSTM1Q6UX27 236 aa4.23□□□□□ -1.73
VAPA-206ENST00000583475 P3H2Q8IVL5 708 aa4.23□□□□□ -1.73
VAPA-206ENST00000583475 OR2C3Q8N628 320 aa4.23□□□□□ -1.73
VAPA-206ENST00000583475 MAP4K1Q92918 833 aa4.23□□□□□ -1.73
VAPA-206ENST00000583475 RPL36ALQ969Q0 106 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms