RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 EBF3Q9H4W6 596 aa17.17■□□□□ 0.34
RNF43-206ENST00000582293 TAS2R14Q9NYV8 317 aa17.17■□□□□ 0.34
RNF43-206ENST00000582293 E2F8A0AVK6 867 aa17.16■□□□□ 0.34
RNF43-206ENST00000582293 SART1O43290 800 aaKnown RBP17.16■□□□□ 0.34
RNF43-206ENST00000582293 MSI1O43347 362 aaKnown RBP17.16■□□□□ 0.34
RNF43-206ENST00000582293 TPM3P06753 285 aa17.16■□□□□ 0.34
RNF43-206ENST00000582293 IRF1P10914 325 aa17.16■□□□□ 0.34
RNF43-206ENST00000582293 SOX9P48436 509 aa17.16■□□□□ 0.34
RNF43-206ENST00000582293 PLCB2Q00722 1185 aa17.16■□□□□ 0.34
RNF43-206ENST00000582293 SLC6A3Q01959 620 aa17.16■□□□□ 0.34
RNF43-206ENST00000582293 GOLGA8FQ08AF8 430 aa17.16■□□□□ 0.34
RNF43-206ENST00000582293 GOLGA8DPQ0D2H9 430 aa17.16■□□□□ 0.34
RNF43-206ENST00000582293 TBX2Q13207 712 aaPredicted RBP17.16■□□□□ 0.34
RNF43-206ENST00000582293 ARID5BQ14865 1188 aa17.16■□□□□ 0.34
RNF43-206ENST00000582293 OR6B2Q6IFH4 312 aa17.16■□□□□ 0.34
RNF43-206ENST00000582293 TRNP1Q6NT89 227 aa17.16■□□□□ 0.34
RNF43-206ENST00000582293 TRIM72Q6ZMU5 477 aa17.16■□□□□ 0.34
RNF43-206ENST00000582293 Q6ZNB5 142 aa17.16■□□□□ 0.34
RNF43-206ENST00000582293 RSRC2Q7L4I2 434 aaKnown RBP17.16■□□□□ 0.34
RNF43-206ENST00000582293 SLC26A9Q7LBE3 791 aa17.16■□□□□ 0.34
RNF43-206ENST00000582293 ERICH1Q86X53 443 aa17.16■□□□□ 0.34
RNF43-206ENST00000582293 BBS7Q8IWZ6 715 aa17.16■□□□□ 0.34
RNF43-206ENST00000582293 SIX5Q8N196 739 aa17.16■□□□□ 0.34
RNF43-206ENST00000582293 KIAA1958Q8N8K9 716 aa17.16■□□□□ 0.34
RNF43-206ENST00000582293 ZNF397Q8NF99 534 aaPredicted RBP17.16■□□□□ 0.34
RNF43-206ENST00000582293 TTC8Q8TAM2 541 aa17.16■□□□□ 0.34
RNF43-206ENST00000582293 DQX1Q8TE96 717 aaKnown RBP17.16■□□□□ 0.34
RNF43-206ENST00000582293 SYN2Q92777 582 aaPredicted RBP17.16■□□□□ 0.34
RNF43-206ENST00000582293 C18orf8Q96DM3 657 aa17.16■□□□□ 0.34
RNF43-206ENST00000582293 IQCDQ96DY2 449 aa17.16■□□□□ 0.34
RNF43-206ENST00000582293 P2RY11Q96G91 374 aa17.16■□□□□ 0.34
RNF43-206ENST00000582293 CDK5RAP1Q96SZ6 601 aaKnown RBP17.16■□□□□ 0.34
RNF43-206ENST00000582293 ADAM33Q9BZ11 813 aa17.16■□□□□ 0.34
RNF43-206ENST00000582293 NACA2Q9H009 215 aa17.16■□□□□ 0.34
RNF43-206ENST00000582293 ARHGEF3Q9NR81 526 aa17.16■□□□□ 0.34
RNF43-206ENST00000582293 ASNSD1Q9NWL6 643 aa17.16■□□□□ 0.34
RNF43-206ENST00000582293 THG1LQ9NWX6 298 aaKnown RBP17.16■□□□□ 0.34
RNF43-206ENST00000582293 DUS2Q9NX74 493 aaKnown RBP17.16■□□□□ 0.34
RNF43-206ENST00000582293 MARCH2Q9P0N8 246 aa17.16■□□□□ 0.34
RNF43-206ENST00000582293 SLC12A8A0AV02 714 aa17.15■□□□□ 0.34
RNF43-206ENST00000582293 DDX3XO00571 662 aaKnown RBP eCLIP17.15■□□□□ 0.34
RNF43-206ENST00000582293 GRAP2O75791 330 aa17.15■□□□□ 0.34
RNF43-206ENST00000582293 IGLV3-25P01717 112 aa17.15■□□□□ 0.34
RNF43-206ENST00000582293 IGLV3-27P01718 113 aa17.15■□□□□ 0.34
RNF43-206ENST00000582293 PLEKP08567 350 aaPredicted RBP17.15■□□□□ 0.34
RNF43-206ENST00000582293 NCAM1P13591 858 aa17.15■□□□□ 0.34
RNF43-206ENST00000582293 ZNF75DP51815 510 aa17.15■□□□□ 0.34
RNF43-206ENST00000582293 YWHAZP63104 245 aaKnown RBP17.15■□□□□ 0.34
RNF43-206ENST00000582293 PFKPQ01813 784 aa17.15■□□□□ 0.34
RNF43-206ENST00000582293 EIF4EBP2Q13542 120 aaPredicted RBP17.15■□□□□ 0.34
RNF43-206ENST00000582293 RUNX3Q13761 415 aa17.15■□□□□ 0.34
RNF43-206ENST00000582293 TRIP4Q15650 581 aaPredicted RBP17.15■□□□□ 0.34
RNF43-206ENST00000582293 MLF2Q15773 248 aaPredicted RBP17.15■□□□□ 0.34
RNF43-206ENST00000582293 GAB4Q2WGN9 574 aa17.15■□□□□ 0.34
RNF43-206ENST00000582293 OTUD1Q5VV17 481 aaPredicted RBP17.15■□□□□ 0.34
RNF43-206ENST00000582293 CWF19L1Q69YN2 538 aaKnown RBP17.15■□□□□ 0.34
RNF43-206ENST00000582293 WDR59Q6PJI9 974 aa17.15■□□□□ 0.34
RNF43-206ENST00000582293 MMS22LQ6ZRQ5 1243 aa17.15■□□□□ 0.34
RNF43-206ENST00000582293 HTR3DQ70Z44 454 aa17.15■□□□□ 0.34
RNF43-206ENST00000582293 TADA2BQ86TJ2 420 aa17.15■□□□□ 0.34
RNF43-206ENST00000582293 DDX42Q86XP3 938 aaKnown RBP eCLIP17.15■□□□□ 0.34
RNF43-206ENST00000582293 DNAAF5Q86Y56 855 aa17.15■□□□□ 0.34
RNF43-206ENST00000582293 PHF13Q86YI8 300 aaPredicted RBP17.15■□□□□ 0.34
RNF43-206ENST00000582293 FMNL3Q8IVF7 1028 aa17.15■□□□□ 0.34
RNF43-206ENST00000582293 ADGRG2Q8IZP9 1017 aa17.15■□□□□ 0.34
RNF43-206ENST00000582293 DEFB106AQ8N104 65 aa17.15■□□□□ 0.34
RNF43-206ENST00000582293 FAM149B1Q96BN6 582 aa17.15■□□□□ 0.34
RNF43-206ENST00000582293 DDX23Q9BUQ8 820 aaKnown RBP17.15■□□□□ 0.34
RNF43-206ENST00000582293 TRIM5Q9C035 493 aa17.15■□□□□ 0.34
RNF43-206ENST00000582293 POPDC2Q9HBU9 364 aa17.15■□□□□ 0.34
RNF43-206ENST00000582293 OLA1Q9NTK5 396 aaKnown RBP17.15■□□□□ 0.34
RNF43-206ENST00000582293 FBXL21Q9UKT6 434 aa17.15■□□□□ 0.34
RNF43-206ENST00000582293 LUC7L2Q9Y383 392 aaKnown RBP17.15■□□□□ 0.34
RNF43-206ENST00000582293 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.15■□□□□ 0.34
RNF43-206ENST00000582293 TCRBV5S1A1TA0A578 114 aa17.14■□□□□ 0.33
RNF43-206ENST00000582293 GPR37L1O60883 481 aa17.14■□□□□ 0.33
RNF43-206ENST00000582293 GLI1P08151 1106 aa17.14■□□□□ 0.33
RNF43-206ENST00000582293 HMBSP08397 361 aa17.14■□□□□ 0.33
RNF43-206ENST00000582293 CCDC172P0C7W6 258 aa17.14■□□□□ 0.33
RNF43-206ENST00000582293 HNRNPH3P31942 346 aaKnown RBP17.14■□□□□ 0.33
RNF43-206ENST00000582293 STARD6P59095 220 aa17.14■□□□□ 0.33
RNF43-206ENST00000582293 KLHL30Q0D2K2 578 aa17.14■□□□□ 0.33
RNF43-206ENST00000582293 PDGFRLQ15198 375 aa17.14■□□□□ 0.33
RNF43-206ENST00000582293 EFHC1Q5JVL4 640 aa17.14■□□□□ 0.33
RNF43-206ENST00000582293 NAIF1Q69YI7 327 aaPredicted RBP17.14■□□□□ 0.33
RNF43-206ENST00000582293 CC2D1AQ6P1N0 951 aaPredicted RBP17.14■□□□□ 0.33
RNF43-206ENST00000582293 TXNDC11Q6PKC3 985 aa17.14■□□□□ 0.33
RNF43-206ENST00000582293 MON1BQ7L1V2 547 aa17.14■□□□□ 0.33
RNF43-206ENST00000582293 PHLDB2Q86SQ0 1253 aa17.14■□□□□ 0.33
RNF43-206ENST00000582293 TAC4Q86UU9 113 aa17.14■□□□□ 0.33
RNF43-206ENST00000582293 ZDHHC17Q8IUH5 632 aa17.14■□□□□ 0.33
RNF43-206ENST00000582293 ZNF687Q8N1G0 1237 aa17.14■□□□□ 0.33
RNF43-206ENST00000582293 ADAM32Q8TC27 787 aa17.14■□□□□ 0.33
RNF43-206ENST00000582293 IPO4Q8TEX9 1081 aaKnown RBP17.14■□□□□ 0.33
RNF43-206ENST00000582293 RNF139Q8WU17 664 aa17.14■□□□□ 0.33
RNF43-206ENST00000582293 C11orf70Q9BRQ4 267 aa17.14■□□□□ 0.33
RNF43-206ENST00000582293 ECT2Q9H8V3 914 aa17.14■□□□□ 0.33
RNF43-206ENST00000582293 CALCOCO1Q9P1Z2 691 aa17.14■□□□□ 0.33
RNF43-206ENST00000582293 TMEM59LQ9UK28 342 aa17.14■□□□□ 0.33
RNF43-206ENST00000582293 HSF2BPO75031 334 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms