RNA–Protein interactions for RNA: ENST00000582232.1

GGA3-211, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-211ENST00000582232 PGAP3Q96FM1 320 aaPredicted RBP12.03□□□□□ -0.48
GGA3-211ENST00000582232 RIPOR3Q96MK2 946 aa12.03□□□□□ -0.48
GGA3-211ENST00000582232 GCNAQ96QF7 691 aa12.03□□□□□ -0.48
GGA3-211ENST00000582232 NPY6RQ99463 290 aa12.03□□□□□ -0.48
GGA3-211ENST00000582232 CNPY3Q9BT09 278 aa12.03□□□□□ -0.48
GGA3-211ENST00000582232 ATXN3LQ9H3M9 355 aa12.03□□□□□ -0.48
GGA3-211ENST00000582232 UBE2ZQ9H832 354 aaPredicted RBP12.03□□□□□ -0.48
GGA3-211ENST00000582232 OSGEPQ9NPF4 335 aa12.03□□□□□ -0.48
GGA3-211ENST00000582232 SALL4Q9UJQ4 1053 aa12.03□□□□□ -0.48
GGA3-211ENST00000582232 STAP1Q9ULZ2 295 aa12.03□□□□□ -0.48
GGA3-211ENST00000582232 TFR2Q9UP52 801 aa12.03□□□□□ -0.48
GGA3-211ENST00000582232 NAALADL1Q9UQQ1 740 aa12.03□□□□□ -0.48
GGA3-211ENST00000582232 ZKSCAN5Q9Y2L8 839 aa12.03□□□□□ -0.48
GGA3-211ENST00000582232 DUSP10Q9Y6W6 482 aa12.03□□□□□ -0.48
GGA3-211ENST00000582232 A0A1W2PRU2 124 aa12.02□□□□□ -0.49
GGA3-211ENST00000582232 GOLGA6L9A6NEM1 432 aa12.02□□□□□ -0.49
GGA3-211ENST00000582232 MYO1FO00160 1098 aa12.02□□□□□ -0.49
GGA3-211ENST00000582232 GPD1P21695 349 aa12.02□□□□□ -0.49
GGA3-211ENST00000582232 SDC4P31431 198 aa12.02□□□□□ -0.49
GGA3-211ENST00000582232 ATP5C1P36542 298 aaKnown RBP12.02□□□□□ -0.49
GGA3-211ENST00000582232 RNASE9P60153 205 aaKnown RBP12.02□□□□□ -0.49
GGA3-211ENST00000582232 NTHL1P78549 312 aa12.02□□□□□ -0.49
GGA3-211ENST00000582232 OGDHQ02218 1023 aa12.02□□□□□ -0.49
GGA3-211ENST00000582232 NNTQ13423 1086 aa12.02□□□□□ -0.49
GGA3-211ENST00000582232 PIGHQ14442 188 aaPredicted RBP12.02□□□□□ -0.49
GGA3-211ENST00000582232 IFI16Q16666 785 aaKnown RBP12.02□□□□□ -0.49
GGA3-211ENST00000582232 CCDC14Q49A88 953 aa12.02□□□□□ -0.49
GGA3-211ENST00000582232 ARHGAP15Q53QZ3 475 aa12.02□□□□□ -0.49
GGA3-211ENST00000582232 DCAF6Q58WW2 860 aa12.02□□□□□ -0.49
GGA3-211ENST00000582232 STRADAQ7RTN6 431 aa12.02□□□□□ -0.49
GGA3-211ENST00000582232 CCAR2Q8N163 923 aaKnown RBP12.02□□□□□ -0.49
GGA3-211ENST00000582232 EMC1Q8N766 993 aa12.02□□□□□ -0.49
GGA3-211ENST00000582232 RNF139Q8WU17 664 aa12.02□□□□□ -0.49
GGA3-211ENST00000582232 SUSD6Q92537 303 aa12.02□□□□□ -0.49
GGA3-211ENST00000582232 EDEM1Q92611 657 aa12.02□□□□□ -0.49
GGA3-211ENST00000582232 TCEAL4Q96EI5 215 aa12.02□□□□□ -0.49
GGA3-211ENST00000582232 NECTIN4Q96NY8 510 aa12.02□□□□□ -0.49
GGA3-211ENST00000582232 NCAPGQ9BPX3 1015 aa12.02□□□□□ -0.49
GGA3-211ENST00000582232 TRIM7Q9C029 511 aa12.02□□□□□ -0.49
GGA3-211ENST00000582232 SMOC2Q9H3U7 446 aa12.02□□□□□ -0.49
GGA3-211ENST00000582232 TASP1Q9H6P5 420 aa12.02□□□□□ -0.49
GGA3-211ENST00000582232 CCSER2Q9H7U1 834 aa12.02□□□□□ -0.49
GGA3-211ENST00000582232 IP6K2Q9UHH9 426 aa12.02□□□□□ -0.49
GGA3-211ENST00000582232 CD207Q9UJ71 328 aa12.02□□□□□ -0.49
GGA3-211ENST00000582232 ANAPC7Q9UJX3 599 aa12.02□□□□□ -0.49
GGA3-211ENST00000582232 MRPS23Q9Y3D9 190 aaKnown RBP12.02□□□□□ -0.49
GGA3-211ENST00000582232 DOCK8Q8NF50 2099 aa12.02□□□□□ -0.49
GGA3-211ENST00000582232 XIRP2A4UGR9 3374 aa12.02□□□□□ -0.49
GGA3-211ENST00000582232 A0A0C4DFX4 3053 aa12.02□□□□□ -0.49
GGA3-211ENST00000582232 NUP210Q8TEM1 1887 aaPredicted RBP12.02□□□□□ -0.49
GGA3-211ENST00000582232 EYSQ5T1H1 3165 aa12.02□□□□□ -0.49
GGA3-211ENST00000582232 HELZP42694 1942 aaKnown RBP12.01□□□□□ -0.49
GGA3-211ENST00000582232 C2orf78A6NCI8 922 aa12.01□□□□□ -0.49
GGA3-211ENST00000582232 NRG2O14511 850 aaPredicted RBP12.01□□□□□ -0.49
GGA3-211ENST00000582232 COCHO43405 550 aa12.01□□□□□ -0.49
GGA3-211ENST00000582232 PROSCO94903 275 aa12.01□□□□□ -0.49
GGA3-211ENST00000582232 TRUB2O95900 331 aaKnown RBP12.01□□□□□ -0.49
GGA3-211ENST00000582232 ABL1P00519 1130 aa12.01□□□□□ -0.49
GGA3-211ENST00000582232 F9P00740 461 aa12.01□□□□□ -0.49
GGA3-211ENST00000582232 FSHRP23945 695 aa12.01□□□□□ -0.49
GGA3-211ENST00000582232 MAN1A1P33908 653 aa12.01□□□□□ -0.49
GGA3-211ENST00000582232 DEKP35659 375 aaKnown RBP12.01□□□□□ -0.49
GGA3-211ENST00000582232 NOP2P46087 812 aaKnown RBP12.01□□□□□ -0.49
GGA3-211ENST00000582232 ZNF252P-AS1Q0IIN9 211 aa12.01□□□□□ -0.49
GGA3-211ENST00000582232 CCDC85BQ15834 202 aaPredicted RBP12.01□□□□□ -0.49
GGA3-211ENST00000582232 ARHGAP29Q52LW3 1261 aa12.01□□□□□ -0.49
GGA3-211ENST00000582232 C10orf120Q5SQS8 335 aa12.01□□□□□ -0.49
GGA3-211ENST00000582232 OTUD1Q5VV17 481 aaPredicted RBP12.01□□□□□ -0.49
GGA3-211ENST00000582232 TXNDC8Q6A555 127 aa12.01□□□□□ -0.49
GGA3-211ENST00000582232 RSRC2Q7L4I2 434 aaKnown RBP12.01□□□□□ -0.49
GGA3-211ENST00000582232 TPCN2Q8NHX9 752 aa12.01□□□□□ -0.49
GGA3-211ENST00000582232 ITFG1Q8TB96 612 aa12.01□□□□□ -0.49
GGA3-211ENST00000582232 DQX1Q8TE96 717 aaKnown RBP12.01□□□□□ -0.49
GGA3-211ENST00000582232 UBE2Q2Q8WVN8 375 aa12.01□□□□□ -0.49
GGA3-211ENST00000582232 HLA-CQ95604 372 aa12.01□□□□□ -0.49
GGA3-211ENST00000582232 CFAP57Q96MR6 1250 aa12.01□□□□□ -0.49
GGA3-211ENST00000582232 SLC46A2Q9BY10 475 aa12.01□□□□□ -0.49
GGA3-211ENST00000582232 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.01□□□□□ -0.49
GGA3-211ENST00000582232 TRIM10Q9UDY6 481 aa12.01□□□□□ -0.49
GGA3-211ENST00000582232 DNMT3LQ9UJW3 386 aa12.01□□□□□ -0.49
GGA3-211ENST00000582232 TRAV19A0A0A6YYK7 116 aa12□□□□□ -0.49
GGA3-211ENST00000582232 TBX18O95935 607 aa12□□□□□ -0.49
GGA3-211ENST00000582232 GJA1P17302 382 aa12□□□□□ -0.49
GGA3-211ENST00000582232 DESP17661 470 aa12□□□□□ -0.49
GGA3-211ENST00000582232 CEBPBP17676 345 aa12□□□□□ -0.49
GGA3-211ENST00000582232 HDCP19113 662 aa12□□□□□ -0.49
GGA3-211ENST00000582232 PSMA2P25787 234 aa12□□□□□ -0.49
GGA3-211ENST00000582232 GBP1P32455 592 aa12□□□□□ -0.49
GGA3-211ENST00000582232 SLC1A1P43005 524 aa12□□□□□ -0.49
GGA3-211ENST00000582232 KPNA1P52294 538 aaPredicted RBP12□□□□□ -0.49
GGA3-211ENST00000582232 SLC7A9P82251 487 aa12□□□□□ -0.49
GGA3-211ENST00000582232 CYP4F8P98187 520 aa12□□□□□ -0.49
GGA3-211ENST00000582232 RING1Q06587 406 aa12□□□□□ -0.49
GGA3-211ENST00000582232 SMAD4Q13485 552 aaKnown RBP12□□□□□ -0.49
GGA3-211ENST00000582232 TEAD2Q15562 447 aa12□□□□□ -0.49
GGA3-211ENST00000582232 GPR158Q5T848 1215 aa12□□□□□ -0.49
GGA3-211ENST00000582232 C11orf63Q6NUN7 778 aa12□□□□□ -0.49
GGA3-211ENST00000582232 EP400NLQ6ZTU2 488 aa12□□□□□ -0.49
GGA3-211ENST00000582232 SLFN11Q7Z7L1 901 aa12□□□□□ -0.49
GGA3-211ENST00000582232 TAC4Q86UU9 113 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms