RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 DCLK1O15075 740 aa22■■□□□ 1.11
CCDC42-203ENST00000581598 CACNG3O60359 315 aa22■■□□□ 1.11
CCDC42-203ENST00000581598 GDF9O60383 454 aa22■■□□□ 1.11
CCDC42-203ENST00000581598 RALAP11233 206 aa22■■□□□ 1.11
CCDC42-203ENST00000581598 HNRNPLP14866 589 aaKnown RBP eCLIP22■■□□□ 1.11
CCDC42-203ENST00000581598 TIE1P35590 1138 aa22■■□□□ 1.11
CCDC42-203ENST00000581598 MPLP40238 635 aa22■■□□□ 1.11
CCDC42-203ENST00000581598 PPP1R2P41236 205 aa22■■□□□ 1.11
CCDC42-203ENST00000581598 ANO4Q32M45 955 aa22■■□□□ 1.11
CCDC42-203ENST00000581598 DCAF17Q5H9S7 520 aaPredicted RBP22■■□□□ 1.11
CCDC42-203ENST00000581598 RAB41Q5JT25 222 aa22■■□□□ 1.11
CCDC42-203ENST00000581598 ANO7Q6IWH7 933 aa22■■□□□ 1.11
CCDC42-203ENST00000581598 Q6ZNB5 142 aa22■■□□□ 1.11
CCDC42-203ENST00000581598 TRMT11Q7Z4G4 463 aaKnown RBP22■■□□□ 1.11
CCDC42-203ENST00000581598 C12orf50Q8NA57 414 aaPredicted RBP22■■□□□ 1.11
CCDC42-203ENST00000581598 ANKRD52Q8NB46 1076 aa22■■□□□ 1.11
CCDC42-203ENST00000581598 SLC35C1Q96A29 364 aa22■■□□□ 1.11
CCDC42-203ENST00000581598 ARID3AQ99856 593 aa22■■□□□ 1.11
CCDC42-203ENST00000581598 POLMQ9NP87 494 aaPredicted RBP22■■□□□ 1.11
CCDC42-203ENST00000581598 WDR35Q9P2L0 1181 aa22■■□□□ 1.11
CCDC42-203ENST00000581598 ARMCX3Q9UH62 379 aaPredicted RBP22■■□□□ 1.11
CCDC42-203ENST00000581598 NAGPAQ9UK23 515 aa22■■□□□ 1.11
CCDC42-203ENST00000581598 SPTBN2O15020 2390 aa21.99■■□□□ 1.11
CCDC42-203ENST00000581598 DCDC2BA2VCK2 349 aa21.99■■□□□ 1.11
CCDC42-203ENST00000581598 TBC1D3BA6NDS4 549 aa21.99■■□□□ 1.11
CCDC42-203ENST00000581598 ADAM23O75077 832 aa21.99■■□□□ 1.11
CCDC42-203ENST00000581598 STIM1Q13586 685 aa21.99■■□□□ 1.11
CCDC42-203ENST00000581598 CAMK4Q16566 473 aa21.99■■□□□ 1.11
CCDC42-203ENST00000581598 AASDHQ4L235 1098 aaPredicted RBP21.99■■□□□ 1.11
CCDC42-203ENST00000581598 C10orf120Q5SQS8 335 aa21.99■■□□□ 1.11
CCDC42-203ENST00000581598 EMC10Q5UCC4 262 aa21.99■■□□□ 1.11
CCDC42-203ENST00000581598 PMS2CLQ68D20 193 aa21.99■■□□□ 1.11
CCDC42-203ENST00000581598 FOXR2Q6PJQ5 311 aa21.99■■□□□ 1.11
CCDC42-203ENST00000581598 ARHGAP18Q8N392 663 aa21.99■■□□□ 1.11
CCDC42-203ENST00000581598 NAT16Q8N8M0 369 aa21.99■■□□□ 1.11
CCDC42-203ENST00000581598 DHTKD1Q96HY7 919 aaPredicted RBP21.99■■□□□ 1.11
CCDC42-203ENST00000581598 XPO6Q96QU8 1125 aaKnown RBP21.99■■□□□ 1.11
CCDC42-203ENST00000581598 TPSD1Q9BZJ3 242 aa21.99■■□□□ 1.11
CCDC42-203ENST00000581598 METTL14Q9HCE5 456 aaKnown RBP21.99■■□□□ 1.11
CCDC42-203ENST00000581598 ZNF510Q9Y2H8 683 aa21.99■■□□□ 1.11
CCDC42-203ENST00000581598 BCLAF3A2AJT9 711 aaKnown RBP21.98■■□□□ 1.11
CCDC42-203ENST00000581598 TRIM49BA6NDI0 452 aa21.98■■□□□ 1.11
CCDC42-203ENST00000581598 PSMA7O14818 248 aa21.98■■□□□ 1.11
CCDC42-203ENST00000581598 PMM2O15305 246 aa21.98■■□□□ 1.11
CCDC42-203ENST00000581598 SLC8A3P57103 927 aa21.98■■□□□ 1.11
CCDC42-203ENST00000581598 YWHAEP62258 255 aaKnown RBP21.98■■□□□ 1.11
CCDC42-203ENST00000581598 CUL2Q13617 745 aa21.98■■□□□ 1.11
CCDC42-203ENST00000581598 SF3A2Q15428 464 aaKnown RBP21.98■■□□□ 1.11
CCDC42-203ENST00000581598 GRAMD4Q6IC98 578 aa21.98■■□□□ 1.11
CCDC42-203ENST00000581598 PIGZQ86VD9 579 aa21.98■■□□□ 1.11
CCDC42-203ENST00000581598 DDX1Q92499 740 aaKnown RBP21.98■■□□□ 1.11
CCDC42-203ENST00000581598 ERCC4Q92889 916 aaPredicted RBP21.98■■□□□ 1.11
CCDC42-203ENST00000581598 CEP63Q96MT8 703 aa21.98■■□□□ 1.11
CCDC42-203ENST00000581598 MDM4O15151 490 aa21.97■■□□□ 1.11
CCDC42-203ENST00000581598 STC2O76061 302 aa21.97■■□□□ 1.11
CCDC42-203ENST00000581598 TBXAS1P24557 533 aaPredicted RBP21.97■■□□□ 1.11
CCDC42-203ENST00000581598 GBP1P32455 592 aa21.97■■□□□ 1.11
CCDC42-203ENST00000581598 COG7P83436 770 aa21.97■■□□□ 1.11
CCDC42-203ENST00000581598 UBR7Q8N806 425 aa21.97■■□□□ 1.11
CCDC42-203ENST00000581598 ZNF513Q8N8E2 541 aaPredicted RBP21.97■■□□□ 1.11
CCDC42-203ENST00000581598 BBS2Q9BXC9 721 aa21.97■■□□□ 1.11
CCDC42-203ENST00000581598 DNAJC17Q9NVM6 304 aaKnown RBP21.97■■□□□ 1.11
CCDC42-203ENST00000581598 NUDT5Q9UKK9 219 aa21.97■■□□□ 1.11
CCDC42-203ENST00000581598 NEDD8-MDP1E9PL57 170 aa21.96■■□□□ 1.11
CCDC42-203ENST00000581598 TYRP14679 529 aa21.96■■□□□ 1.11
CCDC42-203ENST00000581598 P2RY2P41231 377 aa21.96■■□□□ 1.11
CCDC42-203ENST00000581598 CCDC6Q16204 474 aa21.96■■□□□ 1.11
CCDC42-203ENST00000581598 C10orf76Q5T2E6 689 aa21.96■■□□□ 1.11
CCDC42-203ENST00000581598 PM20D1Q6GTS8 502 aa21.96■■□□□ 1.11
CCDC42-203ENST00000581598 TTC30AQ86WT1 665 aa21.96■■□□□ 1.11
CCDC42-203ENST00000581598 DCLK3Q9C098 648 aa21.96■■□□□ 1.11
CCDC42-203ENST00000581598 KIAA1468Q9P260 1216 aa21.96■■□□□ 1.11
CCDC42-203ENST00000581598 FBXO10Q9UK96 956 aa21.96■■□□□ 1.11
CCDC42-203ENST00000581598 MAN1B1Q9UKM7 699 aa21.96■■□□□ 1.11
CCDC42-203ENST00000581598 HCN2Q9UL51 889 aa21.96■■□□□ 1.11
CCDC42-203ENST00000581598 KIAA1257Q9ULG3 409 aa21.96■■□□□ 1.11
CCDC42-203ENST00000581598 TM4SF5O14894 197 aa21.95■■□□□ 1.1
CCDC42-203ENST00000581598 XPO1O14980 1071 aaKnown RBP21.95■■□□□ 1.1
CCDC42-203ENST00000581598 TRIM24O15164 1050 aa21.95■■□□□ 1.1
CCDC42-203ENST00000581598 FMO5P49326 533 aa21.95■■□□□ 1.1
CCDC42-203ENST00000581598 BCAT1P54687 386 aa21.95■■□□□ 1.1
CCDC42-203ENST00000581598 CREB5Q02930 508 aa21.95■■□□□ 1.1
CCDC42-203ENST00000581598 BYSLQ13895 437 aaKnown RBP21.95■■□□□ 1.1
CCDC42-203ENST00000581598 SGO2Q562F6 1265 aa21.95■■□□□ 1.1
CCDC42-203ENST00000581598 TPGS1Q6ZTW0 290 aa21.95■■□□□ 1.1
CCDC42-203ENST00000581598 TSPAN16Q9UKR8 245 aa21.95■■□□□ 1.1
CCDC42-203ENST00000581598 TNRC6BQ9UPQ9 1833 aaKnown RBP21.94■■□□□ 1.1
CCDC42-203ENST00000581598 CNOT1A5YKK6 2376 aaKnown RBP21.94■■□□□ 1.1
CCDC42-203ENST00000581598 LETM1O95202 739 aaPredicted RBP21.94■■□□□ 1.1
CCDC42-203ENST00000581598 CAVIN2O95810 425 aa21.94■■□□□ 1.1
CCDC42-203ENST00000581598 KLKB1P03952 638 aa21.94■■□□□ 1.1
CCDC42-203ENST00000581598 CISD3P0C7P0 127 aa21.94■■□□□ 1.1
CCDC42-203ENST00000581598 VDRP11473 427 aa21.94■■□□□ 1.1
CCDC42-203ENST00000581598 CD44P16070 742 aaKnown RBP21.94■■□□□ 1.1
CCDC42-203ENST00000581598 BCKDHBP21953 392 aa21.94■■□□□ 1.1
CCDC42-203ENST00000581598 NTSR1P30989 418 aa21.94■■□□□ 1.1
CCDC42-203ENST00000581598 CHKAP35790 457 aa21.94■■□□□ 1.1
CCDC42-203ENST00000581598 YWHAGP61981 247 aaKnown RBP eCLIP21.94■■□□□ 1.1
CCDC42-203ENST00000581598 BST2Q10589 180 aaKnown RBP21.94■■□□□ 1.1
CCDC42-203ENST00000581598 IL31Q6EBC2 164 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms