RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 MIB1Q86YT6 1006 aa22.38■■□□□ 1.17
CSNK1D-216ENST00000581108 NELFBQ8WX92 580 aa22.38■■□□□ 1.17
CSNK1D-216ENST00000581108 NEDD8-MDP1E9PL57 170 aa22.37■■□□□ 1.17
CSNK1D-216ENST00000581108 TULP2O00295 520 aa22.37■■□□□ 1.17
CSNK1D-216ENST00000581108 STC2O76061 302 aa22.37■■□□□ 1.17
CSNK1D-216ENST00000581108 TKTL1P51854 596 aa22.37■■□□□ 1.17
CSNK1D-216ENST00000581108 SF3A2Q15428 464 aaKnown RBP22.37■■□□□ 1.17
CSNK1D-216ENST00000581108 TADA2BQ86TJ2 420 aa22.37■■□□□ 1.17
CSNK1D-216ENST00000581108 UBR7Q8N806 425 aa22.37■■□□□ 1.17
CSNK1D-216ENST00000581108 MDGA1Q8NFP4 955 aa22.37■■□□□ 1.17
CSNK1D-216ENST00000581108 BBS2Q9BXC9 721 aa22.37■■□□□ 1.17
CSNK1D-216ENST00000581108 TSPAN16Q9UKR8 245 aa22.37■■□□□ 1.17
CSNK1D-216ENST00000581108 DCDC2BA2VCK2 349 aa22.36■■□□□ 1.17
CSNK1D-216ENST00000581108 ADAM23O75077 832 aa22.36■■□□□ 1.17
CSNK1D-216ENST00000581108 TYRP14679 529 aa22.36■■□□□ 1.17
CSNK1D-216ENST00000581108 CD19P15391 556 aa22.36■■□□□ 1.17
CSNK1D-216ENST00000581108 SLC8A3P57103 927 aa22.36■■□□□ 1.17
CSNK1D-216ENST00000581108 YWHAEP62258 255 aaKnown RBP22.36■■□□□ 1.17
CSNK1D-216ENST00000581108 PDE4CQ08493 712 aa22.36■■□□□ 1.17
CSNK1D-216ENST00000581108 EFEMP1Q12805 493 aa22.36■■□□□ 1.17
CSNK1D-216ENST00000581108 HSF5Q4G112 596 aaPredicted RBP22.36■■□□□ 1.17
CSNK1D-216ENST00000581108 USP39Q53GS9 565 aaKnown RBP22.36■■□□□ 1.17
CSNK1D-216ENST00000581108 SGO2Q562F6 1265 aa22.36■■□□□ 1.17
CSNK1D-216ENST00000581108 EOGTQ5NDL2 527 aa22.36■■□□□ 1.17
CSNK1D-216ENST00000581108 C10orf76Q5T2E6 689 aa22.36■■□□□ 1.17
CSNK1D-216ENST00000581108 Q6ZNB5 142 aa22.36■■□□□ 1.17
CSNK1D-216ENST00000581108 TERB1Q8NA31 727 aa22.36■■□□□ 1.17
CSNK1D-216ENST00000581108 UBA3Q8TBC4 463 aa22.36■■□□□ 1.17
CSNK1D-216ENST00000581108 NDRG1Q92597 394 aaKnown RBP22.36■■□□□ 1.17
CSNK1D-216ENST00000581108 CNOT6LQ96LI5 555 aaKnown RBP22.36■■□□□ 1.17
CSNK1D-216ENST00000581108 DNAJC17Q9NVM6 304 aaKnown RBP22.36■■□□□ 1.17
CSNK1D-216ENST00000581108 WDR35Q9P2L0 1181 aa22.36■■□□□ 1.17
CSNK1D-216ENST00000581108 RASAL2Q9UJF2 1139 aa22.36■■□□□ 1.17
CSNK1D-216ENST00000581108 CTNND2Q9UQB3 1225 aa22.36■■□□□ 1.17
CSNK1D-216ENST00000581108 NUP205Q92621 2012 aa22.35■■□□□ 1.17
CSNK1D-216ENST00000581108 KLKB1P03952 638 aa22.35■■□□□ 1.17
CSNK1D-216ENST00000581108 HMBSP08397 361 aa22.35■■□□□ 1.17
CSNK1D-216ENST00000581108 ZNF806P0C7X5 589 aa22.35■■□□□ 1.17
CSNK1D-216ENST00000581108 TBXAS1P24557 533 aaPredicted RBP22.35■■□□□ 1.17
CSNK1D-216ENST00000581108 GBP1P32455 592 aa22.35■■□□□ 1.17
CSNK1D-216ENST00000581108 STX17P56962 302 aa22.35■■□□□ 1.17
CSNK1D-216ENST00000581108 YWHAGP61981 247 aaKnown RBP eCLIP22.35■■□□□ 1.17
CSNK1D-216ENST00000581108 ELF2Q15723 593 aa22.35■■□□□ 1.17
CSNK1D-216ENST00000581108 PREPLQ4J6C6 727 aaPredicted RBP22.35■■□□□ 1.17
CSNK1D-216ENST00000581108 NETO1Q8TDF5 533 aa22.35■■□□□ 1.17
CSNK1D-216ENST00000581108 XPO6Q96QU8 1125 aaKnown RBP22.35■■□□□ 1.17
CSNK1D-216ENST00000581108 CDK5RAP1Q96SZ6 601 aaKnown RBP22.35■■□□□ 1.17
CSNK1D-216ENST00000581108 RTKNQ9BST9 563 aa22.35■■□□□ 1.17
CSNK1D-216ENST00000581108 ULBP1Q9BZM6 244 aa22.35■■□□□ 1.17
CSNK1D-216ENST00000581108 SMOC1Q9H4F8 434 aa22.35■■□□□ 1.17
CSNK1D-216ENST00000581108 MARK1Q9P0L2 795 aa22.35■■□□□ 1.17
CSNK1D-216ENST00000581108 HCN2Q9UL51 889 aa22.35■■□□□ 1.17
CSNK1D-216ENST00000581108 XPO1O14980 1071 aaKnown RBP22.34■■□□□ 1.17
CSNK1D-216ENST00000581108 PMM2O15305 246 aa22.34■■□□□ 1.17
CSNK1D-216ENST00000581108 CACNG3O60359 315 aa22.34■■□□□ 1.17
CSNK1D-216ENST00000581108 FOXD2O60548 495 aaPredicted RBP22.34■■□□□ 1.17
CSNK1D-216ENST00000581108 ALDH1A2O94788 518 aa22.34■■□□□ 1.17
CSNK1D-216ENST00000581108 RHOBTB1O94844 696 aa22.34■■□□□ 1.17
CSNK1D-216ENST00000581108 ZBED1O96006 694 aa22.34■■□□□ 1.17
CSNK1D-216ENST00000581108 VDRP11473 427 aa22.34■■□□□ 1.17
CSNK1D-216ENST00000581108 COG7P83436 770 aa22.34■■□□□ 1.17
CSNK1D-216ENST00000581108 PLA2G2CQ5R387 149 aa22.34■■□□□ 1.17
CSNK1D-216ENST00000581108 PM20D1Q6GTS8 502 aa22.34■■□□□ 1.17
CSNK1D-216ENST00000581108 GRAMD4Q6IC98 578 aa22.34■■□□□ 1.17
CSNK1D-216ENST00000581108 NUDT18Q6ZVK8 323 aa22.34■■□□□ 1.17
CSNK1D-216ENST00000581108 ARHGAP18Q8N392 663 aa22.34■■□□□ 1.17
CSNK1D-216ENST00000581108 ZNF513Q8N8E2 541 aaPredicted RBP22.34■■□□□ 1.17
CSNK1D-216ENST00000581108 LMO3Q8TAP4 145 aa22.34■■□□□ 1.17
CSNK1D-216ENST00000581108 BHMTQ93088 406 aa22.34■■□□□ 1.17
CSNK1D-216ENST00000581108 P2RY11Q96G91 374 aa22.34■■□□□ 1.17
CSNK1D-216ENST00000581108 POLMQ9NP87 494 aaPredicted RBP22.34■■□□□ 1.17
CSNK1D-216ENST00000581108 PLK2Q9NYY3 685 aa22.34■■□□□ 1.17
CSNK1D-216ENST00000581108 HESX1Q9UBX0 185 aa22.34■■□□□ 1.17
CSNK1D-216ENST00000581108 PCDHGA5Q9Y5G8 931 aa22.34■■□□□ 1.17
CSNK1D-216ENST00000581108 NCOR2Q9Y618 2525 aa22.34■■□□□ 1.17
CSNK1D-216ENST00000581108 BICDL2A1A5D9 508 aa22.33■■□□□ 1.17
CSNK1D-216ENST00000581108 O00370 1275 aa22.33■■□□□ 1.17
CSNK1D-216ENST00000581108 MPLP40238 635 aa22.33■■□□□ 1.17
CSNK1D-216ENST00000581108 BCAT1P54687 386 aa22.33■■□□□ 1.17
CSNK1D-216ENST00000581108 BST2Q10589 180 aaKnown RBP22.33■■□□□ 1.17
CSNK1D-216ENST00000581108 FOXR2Q6PJQ5 311 aa22.33■■□□□ 1.17
CSNK1D-216ENST00000581108 TMEM270Q6UE05 265 aa22.33■■□□□ 1.17
CSNK1D-216ENST00000581108 TOGARAM2Q6ZUX3 1019 aa22.33■■□□□ 1.17
CSNK1D-216ENST00000581108 RSRC2Q7L4I2 434 aaKnown RBP22.33■■□□□ 1.17
CSNK1D-216ENST00000581108 OLIG1Q8TAK6 271 aa22.33■■□□□ 1.17
CSNK1D-216ENST00000581108 KCNV2Q8TDN2 545 aa22.33■■□□□ 1.17
CSNK1D-216ENST00000581108 RLN3Q8WXF3 142 aa22.33■■□□□ 1.17
CSNK1D-216ENST00000581108 TFAP2BQ92481 460 aa22.33■■□□□ 1.17
CSNK1D-216ENST00000581108 KAT5Q92993 513 aa22.33■■□□□ 1.17
CSNK1D-216ENST00000581108 NT5C1BQ96P26 610 aa22.33■■□□□ 1.17
CSNK1D-216ENST00000581108 LRRC4Q9HBW1 653 aa22.33■■□□□ 1.17
CSNK1D-216ENST00000581108 RXFP3Q9NSD7 469 aa22.33■■□□□ 1.17
CSNK1D-216ENST00000581108 MARCH2Q9P0N8 246 aa22.33■■□□□ 1.17
CSNK1D-216ENST00000581108 KIAA1257Q9ULG3 409 aa22.33■■□□□ 1.17
CSNK1D-216ENST00000581108 LAMA1P25391 3075 aa22.32■■□□□ 1.16
CSNK1D-216ENST00000581108 RNF225M0QZC1 329 aaPredicted RBP22.32■■□□□ 1.16
CSNK1D-216ENST00000581108 SLC30A4O14863 429 aa22.32■■□□□ 1.16
CSNK1D-216ENST00000581108 CISD3P0C7P0 127 aa22.32■■□□□ 1.16
CSNK1D-216ENST00000581108 BCKDHBP21953 392 aa22.32■■□□□ 1.16
CSNK1D-216ENST00000581108 WASP42768 502 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms