RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 C10orf120Q5SQS8 335 aa18.87■□□□□ 0.61
MKS1-209ENST00000580127 RESP18Q5W5W9 173 aa18.87■□□□□ 0.61
MKS1-209ENST00000580127 DEFB119Q8N690 84 aa18.87■□□□□ 0.61
MKS1-209ENST00000580127 UCMAQ8WVF2 138 aa18.87■□□□□ 0.61
MKS1-209ENST00000580127 CYFIP2Q96F07 1278 aa18.87■□□□□ 0.61
MKS1-209ENST00000580127 NT5C1AQ9BXI3 368 aa18.87■□□□□ 0.61
MKS1-209ENST00000580127 CYP3A43Q9HB55 503 aa18.87■□□□□ 0.61
MKS1-209ENST00000580127 PNPLA8Q9NP80 782 aa18.87■□□□□ 0.61
MKS1-209ENST00000580127 USP25Q9UHP3 1055 aa18.87■□□□□ 0.61
MKS1-209ENST00000580127 PCDHA7Q9UN72 937 aa18.87■□□□□ 0.61
MKS1-209ENST00000580127 WASF3Q9UPY6 502 aa18.87■□□□□ 0.61
MKS1-209ENST00000580127 VNN1O95497 513 aa18.86■□□□□ 0.61
MKS1-209ENST00000580127 TBX18O95935 607 aa18.86■□□□□ 0.61
MKS1-209ENST00000580127 ASS1P00966 412 aaKnown RBP18.86■□□□□ 0.61
MKS1-209ENST00000580127 NR3C1P04150 777 aa18.86■□□□□ 0.61
MKS1-209ENST00000580127 ZSCAN22P10073 491 aaPredicted RBP18.86■□□□□ 0.61
MKS1-209ENST00000580127 SPINK2P20155 84 aa18.86■□□□□ 0.61
MKS1-209ENST00000580127 ACO1P21399 889 aaKnown RBP18.86■□□□□ 0.61
MKS1-209ENST00000580127 ADORA2BP29275 332 aa18.86■□□□□ 0.61
MKS1-209ENST00000580127 CHKAP35790 457 aa18.86■□□□□ 0.61
MKS1-209ENST00000580127 PIK3CAP42336 1068 aa18.86■□□□□ 0.61
MKS1-209ENST00000580127 COG7P83436 770 aa18.86■□□□□ 0.61
MKS1-209ENST00000580127 EGFLAMQ63HQ2 1017 aa18.86■□□□□ 0.61
MKS1-209ENST00000580127 CEP135Q66GS9 1140 aa18.86■□□□□ 0.61
MKS1-209ENST00000580127 SV2AQ7L0J3 742 aa18.86■□□□□ 0.61
MKS1-209ENST00000580127 PIP4P1Q86T03 277 aa18.86■□□□□ 0.61
MKS1-209ENST00000580127 ZNF276Q8N554 614 aa18.86■□□□□ 0.61
MKS1-209ENST00000580127 TRIML1Q8N9V2 468 aa18.86■□□□□ 0.61
MKS1-209ENST00000580127 ZMIZ2Q8NF64 920 aa18.86■□□□□ 0.61
MKS1-209ENST00000580127 PLEKHO2Q8TD55 490 aa18.86■□□□□ 0.61
MKS1-209ENST00000580127 GABRG3Q99928 467 aa18.86■□□□□ 0.61
MKS1-209ENST00000580127 DCLK3Q9C098 648 aa18.86■□□□□ 0.61
MKS1-209ENST00000580127 SDCBP2Q9H190 292 aa18.86■□□□□ 0.61
MKS1-209ENST00000580127 CAPN10Q9HC96 672 aa18.86■□□□□ 0.61
MKS1-209ENST00000580127 FAM49BQ9NUQ9 324 aa18.86■□□□□ 0.61
MKS1-209ENST00000580127 CYP8B1Q9UNU6 501 aa18.86■□□□□ 0.61
MKS1-209ENST00000580127 MSRB2Q9Y3D2 182 aa18.86■□□□□ 0.61
MKS1-209ENST00000580127 ATXN2Q99700 1313 aaKnown RBP18.85■□□□□ 0.61
MKS1-209ENST00000580127 IGHV1OR15-9A0A0B4J2B8 117 aa18.85■□□□□ 0.61
MKS1-209ENST00000580127 A0A1W2PQF6 199 aa18.85■□□□□ 0.61
MKS1-209ENST00000580127 BEST1O76090 585 aa18.85■□□□□ 0.61
MKS1-209ENST00000580127 RARGP13631 454 aa18.85■□□□□ 0.61
MKS1-209ENST00000580127 KRT13P13646 458 aa18.85■□□□□ 0.61
MKS1-209ENST00000580127 RPL13P26373 211 aaKnown RBP18.85■□□□□ 0.61
MKS1-209ENST00000580127 STK4Q13043 487 aa18.85■□□□□ 0.61
MKS1-209ENST00000580127 ZNF423Q2M1K9 1284 aa18.85■□□□□ 0.61
MKS1-209ENST00000580127 PLEKHG6Q3KR16 790 aa18.85■□□□□ 0.61
MKS1-209ENST00000580127 FOXD4L6Q3SYB3 417 aaPredicted RBP18.85■□□□□ 0.61
MKS1-209ENST00000580127 FOXD4L5Q5VV16 416 aaPredicted RBP18.85■□□□□ 0.61
MKS1-209ENST00000580127 FOXD4L3Q6VB84 417 aaPredicted RBP18.85■□□□□ 0.61
MKS1-209ENST00000580127 TTC39CQ8N584 583 aa18.85■□□□□ 0.61
MKS1-209ENST00000580127 MINDY1Q8N5J2 469 aa18.85■□□□□ 0.61
MKS1-209ENST00000580127 C12orf29Q8N999 325 aa18.85■□□□□ 0.61
MKS1-209ENST00000580127 FOXD4L4Q8WXT5 416 aaPredicted RBP18.85■□□□□ 0.61
MKS1-209ENST00000580127 ZNF419Q96HQ0 510 aaPredicted RBP18.85■□□□□ 0.61
MKS1-209ENST00000580127 HSPA12BQ96MM6 686 aa18.85■□□□□ 0.61
MKS1-209ENST00000580127 BACH2Q9BYV9 841 aa18.85■□□□□ 0.61
MKS1-209ENST00000580127 ZDHHC5Q9C0B5 715 aa18.85■□□□□ 0.61
MKS1-209ENST00000580127 NAGPAQ9UK23 515 aa18.85■□□□□ 0.61
MKS1-209ENST00000580127 TNRC6BQ9UPQ9 1833 aaKnown RBP18.85■□□□□ 0.61
MKS1-209ENST00000580127 MAPK13O15264 365 aa18.84■□□□□ 0.61
MKS1-209ENST00000580127 HLA-DRAP01903 254 aa18.84■□□□□ 0.61
MKS1-209ENST00000580127 CYBBP04839 570 aa18.84■□□□□ 0.61
MKS1-209ENST00000580127 NDUFV2P19404 249 aa18.84■□□□□ 0.61
MKS1-209ENST00000580127 VAMP7P51809 220 aa18.84■□□□□ 0.61
MKS1-209ENST00000580127 SLC8A3P57103 927 aa18.84■□□□□ 0.61
MKS1-209ENST00000580127 ORC1Q13415 861 aa18.84■□□□□ 0.61
MKS1-209ENST00000580127 KIAA1324Q6UXG2 1013 aaKnown RBP18.84■□□□□ 0.61
MKS1-209ENST00000580127 ARHGAP18Q8N392 663 aa18.84■□□□□ 0.61
MKS1-209ENST00000580127 JAKMIP2Q96AA8 810 aa18.84■□□□□ 0.61
MKS1-209ENST00000580127 PAGE5Q96GU1 130 aa18.84■□□□□ 0.61
MKS1-209ENST00000580127 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.84■□□□□ 0.61
MKS1-209ENST00000580127 SERTAD1Q9UHV2 236 aa18.84■□□□□ 0.61
MKS1-209ENST00000580127 ADAMTS9Q9P2N4 1935 aa18.83■□□□□ 0.6
MKS1-209ENST00000580127 SPAARA0A1B0GVQ0 90 aa18.83■□□□□ 0.6
MKS1-209ENST00000580127 A0A1W2PQH9 124 aa18.83■□□□□ 0.6
MKS1-209ENST00000580127 TRIM24O15164 1050 aa18.83■□□□□ 0.6
MKS1-209ENST00000580127 HYAL3O43820 417 aaPredicted RBP18.83■□□□□ 0.6
MKS1-209ENST00000580127 SYNCRIPO60506 623 aaKnown RBP18.83■□□□□ 0.6
MKS1-209ENST00000580127 OXTRP30559 389 aa18.83■□□□□ 0.6
MKS1-209ENST00000580127 ASPAP45381 313 aa18.83■□□□□ 0.6
MKS1-209ENST00000580127 DLG4P78352 724 aa18.83■□□□□ 0.6
MKS1-209ENST00000580127 KMT5BQ4FZB7 885 aa18.83■□□□□ 0.6
MKS1-209ENST00000580127 KIAA1211LQ6NV74 962 aa18.83■□□□□ 0.6
MKS1-209ENST00000580127 CLEC20AQ6ZU45 233 aa18.83■□□□□ 0.6
MKS1-209ENST00000580127 INTS8Q75QN2 995 aaKnown RBP18.83■□□□□ 0.6
MKS1-209ENST00000580127 METTL3Q86U44 580 aaKnown RBP18.83■□□□□ 0.6
MKS1-209ENST00000580127 MIB1Q86YT6 1006 aa18.83■□□□□ 0.6
MKS1-209ENST00000580127 ZCCHC14Q8WYQ9 949 aaKnown RBP18.83■□□□□ 0.6
MKS1-209ENST00000580127 GATA6Q92908 595 aa18.83■□□□□ 0.6
MKS1-209ENST00000580127 WBP2Q969T9 261 aa18.83■□□□□ 0.6
MKS1-209ENST00000580127 MRGPRX1Q96LB2 322 aa18.83■□□□□ 0.6
MKS1-209ENST00000580127 ACOX2Q99424 681 aa18.83■□□□□ 0.6
MKS1-209ENST00000580127 KCTD10Q9H3F6 313 aa18.83■□□□□ 0.6
MKS1-209ENST00000580127 PRDM16Q9HAZ2 1276 aa18.83■□□□□ 0.6
MKS1-209ENST00000580127 DNAAF2Q9NVR5 837 aaKnown RBP18.83■□□□□ 0.6
MKS1-209ENST00000580127 CLIC5Q9NZA1 410 aa18.83■□□□□ 0.6
MKS1-209ENST00000580127 RCOR1Q9UKL0 485 aa18.83■□□□□ 0.6
MKS1-209ENST00000580127 STRIP2Q9ULQ0 834 aa18.83■□□□□ 0.6
MKS1-209ENST00000580127 SLC27A6Q9Y2P4 619 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms