RNA–Protein interactions for RNA: ENST00000580012.1

NDEL1-207, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-207ENST00000580012 USP4Q13107 963 aa23.78■■□□□ 1.4
NDEL1-207ENST00000580012 TSR1Q2NL82 804 aaKnown RBP23.78■■□□□ 1.4
NDEL1-207ENST00000580012 TDRD12Q587J7 1177 aaKnown RBP23.78■■□□□ 1.4
NDEL1-207ENST00000580012 ARCQ7LC44 396 aa23.78■■□□□ 1.4
NDEL1-207ENST00000580012 MCOLN2Q8IZK6 566 aa23.78■■□□□ 1.4
NDEL1-207ENST00000580012 GOLGA1Q92805 767 aa23.78■■□□□ 1.4
NDEL1-207ENST00000580012 C11orf70Q9BRQ4 267 aa23.78■■□□□ 1.4
NDEL1-207ENST00000580012 ISCUQ9H1K1 167 aa23.78■■□□□ 1.4
NDEL1-207ENST00000580012 GRPEL1Q9HAV7 217 aa23.78■■□□□ 1.4
NDEL1-207ENST00000580012 ZNHIT6Q9NWK9 470 aaKnown RBP23.78■■□□□ 1.4
NDEL1-207ENST00000580012 WDR35Q9P2L0 1181 aa23.78■■□□□ 1.4
NDEL1-207ENST00000580012 TMEM59LQ9UK28 342 aa23.78■■□□□ 1.4
NDEL1-207ENST00000580012 SORCS3Q9UPU3 1222 aa23.78■■□□□ 1.4
NDEL1-207ENST00000580012 NAALADL1Q9UQQ1 740 aa23.78■■□□□ 1.4
NDEL1-207ENST00000580012 ZNF638Q14966 1978 aaKnown RBP23.78■■□□□ 1.4
NDEL1-207ENST00000580012 TCRBV5S1A1TA0A578 114 aa23.77■■□□□ 1.4
NDEL1-207ENST00000580012 GOLGA6L3A6NEY3 463 aa23.77■■□□□ 1.4
NDEL1-207ENST00000580012 CALB1P05937 261 aa23.77■■□□□ 1.4
NDEL1-207ENST00000580012 EIF4A3P38919 411 aaKnown RBP23.77■■□□□ 1.4
NDEL1-207ENST00000580012 SYPL2Q5VXT5 272 aa23.77■■□□□ 1.4
NDEL1-207ENST00000580012 RSRC2Q7L4I2 434 aaKnown RBP23.77■■□□□ 1.4
NDEL1-207ENST00000580012 DDX42Q86XP3 938 aaKnown RBP eCLIP23.77■■□□□ 1.4
NDEL1-207ENST00000580012 RNF139Q8WU17 664 aa23.77■■□□□ 1.4
NDEL1-207ENST00000580012 FAM149B1Q96BN6 582 aa23.77■■□□□ 1.4
NDEL1-207ENST00000580012 CHP1Q99653 195 aa23.77■■□□□ 1.4
NDEL1-207ENST00000580012 TRMT61BQ9BVS5 477 aaKnown RBP23.77■■□□□ 1.4
NDEL1-207ENST00000580012 NACA2Q9H009 215 aa23.77■■□□□ 1.4
NDEL1-207ENST00000580012 SLC2A4RGQ9NR83 387 aa23.77■■□□□ 1.4
NDEL1-207ENST00000580012 SMPD4Q9NXE4 827 aa23.77■■□□□ 1.4
NDEL1-207ENST00000580012 MARCH2Q9P0N8 246 aa23.77■■□□□ 1.4
NDEL1-207ENST00000580012 IMPACTQ9P2X3 320 aa23.77■■□□□ 1.4
NDEL1-207ENST00000580012 STRIP2Q9ULQ0 834 aa23.77■■□□□ 1.4
NDEL1-207ENST00000580012 MYH10P35580 1976 aa23.77■■□□□ 1.4
NDEL1-207ENST00000580012 A0A087X0T9 212 aa23.76■■□□□ 1.39
NDEL1-207ENST00000580012 FAM170AA1A519 330 aa23.76■■□□□ 1.39
NDEL1-207ENST00000580012 RTN2O75298 545 aa23.76■■□□□ 1.39
NDEL1-207ENST00000580012 FTLP02792 175 aaPredicted RBP23.76■■□□□ 1.39
NDEL1-207ENST00000580012 FAM228BP0C875 321 aa23.76■■□□□ 1.39
NDEL1-207ENST00000580012 NCAM1P13591 858 aa23.76■■□□□ 1.39
NDEL1-207ENST00000580012 COG7P83436 770 aa23.76■■□□□ 1.39
NDEL1-207ENST00000580012 EFEMP1Q12805 493 aa23.76■■□□□ 1.39
NDEL1-207ENST00000580012 EIF4EBP2Q13542 120 aaPredicted RBP23.76■■□□□ 1.39
NDEL1-207ENST00000580012 VPS36Q86VN1 386 aa23.76■■□□□ 1.39
NDEL1-207ENST00000580012 DEFB106AQ8N104 65 aa23.76■■□□□ 1.39
NDEL1-207ENST00000580012 WBP2Q969T9 261 aa23.76■■□□□ 1.39
NDEL1-207ENST00000580012 FAM83CQ9BQN1 747 aa23.76■■□□□ 1.39
NDEL1-207ENST00000580012 TRPV5Q9NQA5 729 aa23.76■■□□□ 1.39
NDEL1-207ENST00000580012 MUTYHQ9UIF7 546 aa23.76■■□□□ 1.39
NDEL1-207ENST00000580012 DUSP12Q9UNI6 340 aa23.76■■□□□ 1.39
NDEL1-207ENST00000580012 E2F8A0AVK6 867 aa23.75■■□□□ 1.39
NDEL1-207ENST00000580012 ARNTLO00327 626 aa23.75■■□□□ 1.39
NDEL1-207ENST00000580012 CHADO15335 359 aa23.75■■□□□ 1.39
NDEL1-207ENST00000580012 IGLV3-25P01717 112 aa23.75■■□□□ 1.39
NDEL1-207ENST00000580012 SRFP11831 508 aa23.75■■□□□ 1.39
NDEL1-207ENST00000580012 FECHP22830 423 aa23.75■■□□□ 1.39
NDEL1-207ENST00000580012 GPC5P78333 572 aa23.75■■□□□ 1.39
NDEL1-207ENST00000580012 MTF1Q14872 753 aa23.75■■□□□ 1.39
NDEL1-207ENST00000580012 HTR3DQ70Z44 454 aa23.75■■□□□ 1.39
NDEL1-207ENST00000580012 DQX1Q8TE96 717 aaKnown RBP23.75■■□□□ 1.39
NDEL1-207ENST00000580012 NT5C3BQ969T7 300 aa23.75■■□□□ 1.39
NDEL1-207ENST00000580012 PANX2Q96RD6 677 aa23.75■■□□□ 1.39
NDEL1-207ENST00000580012 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.75■■□□□ 1.39
NDEL1-207ENST00000580012 SMOC2Q9H3U7 446 aa23.75■■□□□ 1.39
NDEL1-207ENST00000580012 CFAP97Q9P2B7 532 aa23.75■■□□□ 1.39
NDEL1-207ENST00000580012 SFMBT1Q9UHJ3 866 aa23.75■■□□□ 1.39
NDEL1-207ENST00000580012 RAPGEFL1Q9UHV5 662 aa23.75■■□□□ 1.39
NDEL1-207ENST00000580012 HBS1LQ9Y450 684 aaKnown RBP23.75■■□□□ 1.39
NDEL1-207ENST00000580012 ANAPC1Q9H1A4 1944 aa23.74■■□□□ 1.39
NDEL1-207ENST00000580012 NARSO43776 548 aaKnown RBP23.74■■□□□ 1.39
NDEL1-207ENST00000580012 DAB1O75553 588 aa23.74■■□□□ 1.39
NDEL1-207ENST00000580012 GRAP2O75791 330 aa23.74■■□□□ 1.39
NDEL1-207ENST00000580012 NOS2P35228 1153 aa23.74■■□□□ 1.39
NDEL1-207ENST00000580012 GRM2Q14416 872 aa23.74■■□□□ 1.39
NDEL1-207ENST00000580012 TRIP4Q15650 581 aaPredicted RBP23.74■■□□□ 1.39
NDEL1-207ENST00000580012 ARHGAP29Q52LW3 1261 aa23.74■■□□□ 1.39
NDEL1-207ENST00000580012 MIB1Q86YT6 1006 aa23.74■■□□□ 1.39
NDEL1-207ENST00000580012 UBALD2Q8IYN6 164 aa23.74■■□□□ 1.39
NDEL1-207ENST00000580012 C3orf20Q8ND61 904 aa23.74■■□□□ 1.39
NDEL1-207ENST00000580012 NHEJ1Q9H9Q4 299 aaPredicted RBP23.74■■□□□ 1.39
NDEL1-207ENST00000580012 THG1LQ9NWX6 298 aaKnown RBP23.74■■□□□ 1.39
NDEL1-207ENST00000580012 RASAL2Q9UJF2 1139 aa23.74■■□□□ 1.39
NDEL1-207ENST00000580012 DENND4CQ5VZ89 1909 aa23.74■■□□□ 1.39
NDEL1-207ENST00000580012 SLC12A8A0AV02 714 aa23.73■■□□□ 1.39
NDEL1-207ENST00000580012 TMCO5BA8MYB1 307 aa23.73■■□□□ 1.39
NDEL1-207ENST00000580012 CAPN9O14815 690 aa23.73■■□□□ 1.39
NDEL1-207ENST00000580012 STC2O76061 302 aa23.73■■□□□ 1.39
NDEL1-207ENST00000580012 IGLV3-27P01718 113 aa23.73■■□□□ 1.39
NDEL1-207ENST00000580012 GDI1P31150 447 aa23.73■■□□□ 1.39
NDEL1-207ENST00000580012 MATKP42679 507 aa23.73■■□□□ 1.39
NDEL1-207ENST00000580012 KPNA1P52294 538 aaPredicted RBP23.73■■□□□ 1.39
NDEL1-207ENST00000580012 NNTQ13423 1086 aa23.73■■□□□ 1.39
NDEL1-207ENST00000580012 SLC18A3Q16572 532 aa23.73■■□□□ 1.39
NDEL1-207ENST00000580012 DCAF6Q58WW2 860 aa23.73■■□□□ 1.39
NDEL1-207ENST00000580012 PPP1R15BQ5SWA1 713 aa23.73■■□□□ 1.39
NDEL1-207ENST00000580012 FAM102AQ5T9C2 384 aaPredicted RBP23.73■■□□□ 1.39
NDEL1-207ENST00000580012 ALKBH5Q6P6C2 394 aaKnown RBP23.73■■□□□ 1.39
NDEL1-207ENST00000580012 OSCP1Q8WVF1 389 aa23.73■■□□□ 1.39
NDEL1-207ENST00000580012 DDX23Q9BUQ8 820 aaKnown RBP23.73■■□□□ 1.39
NDEL1-207ENST00000580012 C1QTNF1Q9BXJ1 281 aa23.73■■□□□ 1.39
NDEL1-207ENST00000580012 OBSL1O75147 1896 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms