RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 MAMLD1Q13495 774 aa11.68□□□□□ -0.54
CDK5RAP3-204ENST00000577664 EFHC1Q5JVL4 640 aa11.68□□□□□ -0.54
CDK5RAP3-204ENST00000577664 OLFML1Q6UWY5 402 aa11.68□□□□□ -0.54
CDK5RAP3-204ENST00000577664 MMS22LQ6ZRQ5 1243 aa11.68□□□□□ -0.54
CDK5RAP3-204ENST00000577664 TOGARAM2Q6ZUX3 1019 aa11.68□□□□□ -0.54
CDK5RAP3-204ENST00000577664 SLC26A9Q7LBE3 791 aa11.68□□□□□ -0.54
CDK5RAP3-204ENST00000577664 GPRIN1Q7Z2K8 1008 aa11.68□□□□□ -0.54
CDK5RAP3-204ENST00000577664 DNAJB7Q7Z6W7 309 aaPredicted RBP11.68□□□□□ -0.54
CDK5RAP3-204ENST00000577664 ITIH5Q86UX2 942 aa11.68□□□□□ -0.54
CDK5RAP3-204ENST00000577664 SCN4BQ8IWT1 228 aa11.68□□□□□ -0.54
CDK5RAP3-204ENST00000577664 SCUBE3Q8IX30 993 aa11.68□□□□□ -0.54
CDK5RAP3-204ENST00000577664 SLC7A14Q8TBB6 771 aa11.68□□□□□ -0.54
CDK5RAP3-204ENST00000577664 IPO4Q8TEX9 1081 aaKnown RBP11.68□□□□□ -0.54
CDK5RAP3-204ENST00000577664 CASP10Q92851 521 aa11.68□□□□□ -0.54
CDK5RAP3-204ENST00000577664 NT5C3BQ969T7 300 aa11.68□□□□□ -0.54
CDK5RAP3-204ENST00000577664 SEPT5Q99719 369 aaPredicted RBP11.68□□□□□ -0.54
CDK5RAP3-204ENST00000577664 PRKD2Q9BZL6 878 aa11.68□□□□□ -0.54
CDK5RAP3-204ENST00000577664 THAP2Q9H0W7 228 aa11.68□□□□□ -0.54
CDK5RAP3-204ENST00000577664 MRPL47Q9HD33 250 aaKnown RBP11.68□□□□□ -0.54
CDK5RAP3-204ENST00000577664 MAN1C1Q9NR34 630 aa11.68□□□□□ -0.54
CDK5RAP3-204ENST00000577664 SEPT11Q9NVA2 429 aaKnown RBP11.68□□□□□ -0.54
CDK5RAP3-204ENST00000577664 PARVAQ9NVD7 372 aa11.68□□□□□ -0.54
CDK5RAP3-204ENST00000577664 DZANK1Q9NVP4 752 aa11.68□□□□□ -0.54
CDK5RAP3-204ENST00000577664 UVRAGQ9P2Y5 699 aa11.68□□□□□ -0.54
CDK5RAP3-204ENST00000577664 UXTQ9UBK9 157 aaPredicted RBP11.68□□□□□ -0.54
CDK5RAP3-204ENST00000577664 LIMD1Q9UGP4 676 aa11.68□□□□□ -0.54
CDK5RAP3-204ENST00000577664 DUSP12Q9UNI6 340 aa11.68□□□□□ -0.54
CDK5RAP3-204ENST00000577664 CNOT1A5YKK6 2376 aaKnown RBP11.67□□□□□ -0.54
CDK5RAP3-204ENST00000577664 RCCD1A6NED2 376 aa11.67□□□□□ -0.54
CDK5RAP3-204ENST00000577664 FGF19O95750 216 aa11.67□□□□□ -0.54
CDK5RAP3-204ENST00000577664 F11P03951 625 aa11.67□□□□□ -0.54
CDK5RAP3-204ENST00000577664 CCDC175P0C221 793 aa11.67□□□□□ -0.54
CDK5RAP3-204ENST00000577664 SPATA31D3P0C874 917 aa11.67□□□□□ -0.54
CDK5RAP3-204ENST00000577664 PFKLP17858 780 aa11.67□□□□□ -0.54
CDK5RAP3-204ENST00000577664 RRM1P23921 792 aa11.67□□□□□ -0.54
CDK5RAP3-204ENST00000577664 YWHAQP27348 245 aa11.67□□□□□ -0.54
CDK5RAP3-204ENST00000577664 GPR15P49685 360 aa11.67□□□□□ -0.54
CDK5RAP3-204ENST00000577664 RGS7P49802 495 aa11.67□□□□□ -0.54
CDK5RAP3-204ENST00000577664 EIF4EBP2Q13542 120 aaPredicted RBP11.67□□□□□ -0.54
CDK5RAP3-204ENST00000577664 VEPH1Q14D04 833 aa11.67□□□□□ -0.54
CDK5RAP3-204ENST00000577664 ZNF528Q3MIS6 628 aa11.67□□□□□ -0.54
CDK5RAP3-204ENST00000577664 PABPC1LQ4VXU2 614 aaKnown RBP11.67□□□□□ -0.54
CDK5RAP3-204ENST00000577664 PPM1LQ5SGD2 360 aa11.67□□□□□ -0.54
CDK5RAP3-204ENST00000577664 LIN9Q5TKA1 542 aa11.67□□□□□ -0.54
CDK5RAP3-204ENST00000577664 SPATA31D4Q6ZUB0 917 aa11.67□□□□□ -0.54
CDK5RAP3-204ENST00000577664 C1orf210Q8IVY1 113 aa11.67□□□□□ -0.54
CDK5RAP3-204ENST00000577664 RHOT2Q8IXI1 618 aa11.67□□□□□ -0.54
CDK5RAP3-204ENST00000577664 SIX5Q8N196 739 aa11.67□□□□□ -0.54
CDK5RAP3-204ENST00000577664 RNF10Q8N5U6 811 aaKnown RBP11.67□□□□□ -0.54
CDK5RAP3-204ENST00000577664 LEMD2Q8NC56 503 aa11.67□□□□□ -0.54
CDK5RAP3-204ENST00000577664 PDZD8Q8NEN9 1154 aa11.67□□□□□ -0.54
CDK5RAP3-204ENST00000577664 SCAMP5Q8TAC9 235 aa11.67□□□□□ -0.54
CDK5RAP3-204ENST00000577664 KIAA1524Q8TCG1 905 aa11.67□□□□□ -0.54
CDK5RAP3-204ENST00000577664 FNIP1Q8TF40 1166 aa11.67□□□□□ -0.54
CDK5RAP3-204ENST00000577664 ZNF512Q96ME7 567 aaPredicted RBP11.67□□□□□ -0.54
CDK5RAP3-204ENST00000577664 TRIM62Q9BVG3 475 aa11.67□□□□□ -0.54
CDK5RAP3-204ENST00000577664 PACSIN1Q9BY11 444 aa11.67□□□□□ -0.54
CDK5RAP3-204ENST00000577664 ADAM7Q9H2U9 754 aa11.67□□□□□ -0.54
CDK5RAP3-204ENST00000577664 CLIC5Q9NZA1 410 aa11.67□□□□□ -0.54
CDK5RAP3-204ENST00000577664 TJP2Q9UDY2 1190 aa11.67□□□□□ -0.54
CDK5RAP3-204ENST00000577664 LCMT1Q9UIC8 334 aa11.67□□□□□ -0.54
CDK5RAP3-204ENST00000577664 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.67□□□□□ -0.54
CDK5RAP3-204ENST00000577664 SMG1Q96Q15 3661 aaKnown RBP11.67□□□□□ -0.54
CDK5RAP3-204ENST00000577664 MYH10P35580 1976 aa11.67□□□□□ -0.54
CDK5RAP3-204ENST00000577664 TMEM191CA6NGB0 347 aa11.66□□□□□ -0.54
CDK5RAP3-204ENST00000577664 TMCO5BA8MYB1 307 aa11.66□□□□□ -0.54
CDK5RAP3-204ENST00000577664 ZSCAN12O43309 604 aa11.66□□□□□ -0.54
CDK5RAP3-204ENST00000577664 SOAT2O75908 522 aa11.66□□□□□ -0.54
CDK5RAP3-204ENST00000577664 LRG1P02750 347 aa11.66□□□□□ -0.54
CDK5RAP3-204ENST00000577664 FYNP06241 537 aa11.66□□□□□ -0.54
CDK5RAP3-204ENST00000577664 KRT3P12035 628 aa11.66□□□□□ -0.54
CDK5RAP3-204ENST00000577664 PTPN2P17706 415 aa11.66□□□□□ -0.54
CDK5RAP3-204ENST00000577664 CA8P35219 290 aa11.66□□□□□ -0.54
CDK5RAP3-204ENST00000577664 ARHGAP25P42331 645 aa11.66□□□□□ -0.54
CDK5RAP3-204ENST00000577664 TUBP50607 506 aa11.66□□□□□ -0.54
CDK5RAP3-204ENST00000577664 USP46P62068 366 aa11.66□□□□□ -0.54
CDK5RAP3-204ENST00000577664 YWHAZP63104 245 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP3-204ENST00000577664 ADIGQ0VDE8 80 aa11.66□□□□□ -0.54
CDK5RAP3-204ENST00000577664 TDGQ13569 410 aa11.66□□□□□ -0.54
CDK5RAP3-204ENST00000577664 KLHDC10Q6PID8 442 aa11.66□□□□□ -0.54
CDK5RAP3-204ENST00000577664 FAM183BPQ6ZVS7 135 aa11.66□□□□□ -0.54
CDK5RAP3-204ENST00000577664 BNIPLQ7Z465 357 aa11.66□□□□□ -0.54
CDK5RAP3-204ENST00000577664 TMEM150AQ86TG1 271 aa11.66□□□□□ -0.54
CDK5RAP3-204ENST00000577664 TMC8Q8IU68 726 aa11.66□□□□□ -0.54
CDK5RAP3-204ENST00000577664 REXO1L1PQ8IX06 675 aa11.66□□□□□ -0.54
CDK5RAP3-204ENST00000577664 SIX6OS1Q8N1H7 587 aa11.66□□□□□ -0.54
CDK5RAP3-204ENST00000577664 ARHGAP18Q8N392 663 aa11.66□□□□□ -0.54
CDK5RAP3-204ENST00000577664 TDRD5Q8NAT2 981 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP3-204ENST00000577664 KDF1Q8NAX2 398 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-204ENST00000577664 ACRBPQ8NEB7 543 aa11.66□□□□□ -0.54
CDK5RAP3-204ENST00000577664 NETO1Q8TDF5 533 aa11.66□□□□□ -0.54
CDK5RAP3-204ENST00000577664 CTNNBL1Q8WYA6 563 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-204ENST00000577664 RFFLQ8WZ73 363 aa11.66□□□□□ -0.54
CDK5RAP3-204ENST00000577664 ZNF707Q96C28 371 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-204ENST00000577664 SLC2A13Q96QE2 648 aa11.66□□□□□ -0.54
CDK5RAP3-204ENST00000577664 C11orf70Q9BRQ4 267 aa11.66□□□□□ -0.54
CDK5RAP3-204ENST00000577664 ULBP1Q9BZM6 244 aa11.66□□□□□ -0.54
CDK5RAP3-204ENST00000577664 TSGA10Q9BZW7 698 aa11.66□□□□□ -0.54
CDK5RAP3-204ENST00000577664 LACRTQ9GZZ8 138 aa11.66□□□□□ -0.54
CDK5RAP3-204ENST00000577664 SFXN1Q9H9B4 322 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms