RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 A0A087WZ62 844 aa2.92□□□□□ -1.94
COPS3-213ENST00000577210 NPC1O15118 1278 aa2.92□□□□□ -1.94
COPS3-213ENST00000577210 CHRM5P08912 532 aaPredicted RBP2.92□□□□□ -1.94
COPS3-213ENST00000577210 DUSP1P28562 367 aa2.92□□□□□ -1.94
COPS3-213ENST00000577210 SERPINF1P36955 418 aa2.92□□□□□ -1.94
COPS3-213ENST00000577210 CLCN2P51788 898 aa2.92□□□□□ -1.94
COPS3-213ENST00000577210 SIM1P81133 766 aaPredicted RBP2.92□□□□□ -1.94
COPS3-213ENST00000577210 HOXA4Q00056 320 aaPredicted RBP2.92□□□□□ -1.94
COPS3-213ENST00000577210 E2F1Q01094 437 aa2.92□□□□□ -1.94
COPS3-213ENST00000577210 CFHR3Q02985 330 aa2.92□□□□□ -1.94
COPS3-213ENST00000577210 CCDC15Q0P6D6 951 aa2.92□□□□□ -1.94
COPS3-213ENST00000577210 FOXI1Q12951 378 aa2.92□□□□□ -1.94
COPS3-213ENST00000577210 SEMA3BQ13214 749 aa2.92□□□□□ -1.94
COPS3-213ENST00000577210 RAPGEF1Q13905 1077 aa2.92□□□□□ -1.94
COPS3-213ENST00000577210 PRKG1Q13976 671 aa2.92□□□□□ -1.94
COPS3-213ENST00000577210 KCNJ12Q14500 433 aa2.92□□□□□ -1.94
COPS3-213ENST00000577210 DHX8Q14562 1220 aaKnown RBP2.92□□□□□ -1.94
COPS3-213ENST00000577210 ADCK5Q3MIX3 580 aa2.92□□□□□ -1.94
COPS3-213ENST00000577210 ARHGAP15Q53QZ3 475 aa2.92□□□□□ -1.94
COPS3-213ENST00000577210 RAP1GAP2Q684P5 730 aa2.92□□□□□ -1.94
COPS3-213ENST00000577210 VSTM1Q6UX27 236 aa2.92□□□□□ -1.94
COPS3-213ENST00000577210 USP49Q70CQ1 688 aa2.92□□□□□ -1.94
COPS3-213ENST00000577210 RAB11FIP2Q7L804 512 aa2.92□□□□□ -1.94
COPS3-213ENST00000577210 PTF1AQ7RTS3 328 aa2.92□□□□□ -1.94
COPS3-213ENST00000577210 LDLRAD3Q86YD5 345 aa2.92□□□□□ -1.94
COPS3-213ENST00000577210 ANKRD18AQ8IVF6 992 aa2.92□□□□□ -1.94
COPS3-213ENST00000577210 SMAP1Q8IYB5 467 aaPredicted RBP2.92□□□□□ -1.94
COPS3-213ENST00000577210 C16orf71Q8IYS4 520 aaPredicted RBP2.92□□□□□ -1.94
COPS3-213ENST00000577210 GALNT15Q8N3T1 639 aa2.92□□□□□ -1.94
COPS3-213ENST00000577210 C12orf76Q8N812 135 aaPredicted RBP2.92□□□□□ -1.94
COPS3-213ENST00000577210 ANKRD42Q8N9B4 389 aa2.92□□□□□ -1.94
COPS3-213ENST00000577210 ADPRHL1Q8NDY3 354 aa2.92□□□□□ -1.94
COPS3-213ENST00000577210 CPT1BQ92523 772 aa2.92□□□□□ -1.94
COPS3-213ENST00000577210 ZBTB45Q96K62 511 aaPredicted RBP2.92□□□□□ -1.94
COPS3-213ENST00000577210 SNX18Q96RF0 628 aa2.92□□□□□ -1.94
COPS3-213ENST00000577210 PAAF1Q9BRP4 392 aa2.92□□□□□ -1.94
COPS3-213ENST00000577210 RTKNQ9BST9 563 aa2.92□□□□□ -1.94
COPS3-213ENST00000577210 KATNAL1Q9BW62 490 aa2.92□□□□□ -1.94
COPS3-213ENST00000577210 WDR26Q9H7D7 661 aa2.92□□□□□ -1.94
COPS3-213ENST00000577210 PPCSQ9HAB8 311 aa2.92□□□□□ -1.94
COPS3-213ENST00000577210 NDUFAF4Q9P032 175 aa2.92□□□□□ -1.94
COPS3-213ENST00000577210 LRFN1Q9P244 771 aa2.92□□□□□ -1.94
COPS3-213ENST00000577210 TBC1D30Q9Y2I9 924 aa2.92□□□□□ -1.94
COPS3-213ENST00000577210 SPATA31A1Q5TZJ5 1347 aa2.92□□□□□ -1.94
COPS3-213ENST00000577210 C3orf70A6NLC5 250 aaPredicted RBP2.91□□□□□ -1.94
COPS3-213ENST00000577210 LINC00473A8K010 186 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 H0YIZ8 118 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 PIP5K1BO14986 540 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 SEPT4O43236 478 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 CREB3O43889 395 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 RNF8O76064 485 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 USP1O94782 785 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 LMNAP02545 664 aaKnown RBP2.91□□□□□ -1.94
COPS3-213ENST00000577210 FGAP02671 866 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 ANXA6P08133 673 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 PDHA1P08559 390 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 ARP10275 920 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 PECAM1P16284 738 aaPredicted RBP2.91□□□□□ -1.94
COPS3-213ENST00000577210 ENGP17813 658 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 DRD4P21917 467 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 CHKAP35790 457 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 PPM1FP49593 454 aaPredicted RBP2.91□□□□□ -1.94
COPS3-213ENST00000577210 ARL4CP56559 192 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 AP2B1P63010 937 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 TRIM14Q14142 442 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 P3H1Q32P28 736 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 TMTC4Q5T4D3 741 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 L1TD1Q5T7N2 865 aaKnown RBP2.91□□□□□ -1.94
COPS3-213ENST00000577210 ANKRD45Q5TZF3 282 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 KIAA1614Q5VZ46 1190 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 TANGO2Q6ICL3 276 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 RINT1Q6NUQ1 792 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 NFRKBQ6P4R8 1299 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 TRIM72Q6ZMU5 477 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 ZNF627Q7L945 461 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 KRT27Q7Z3Y8 459 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 TRABD2AQ86V40 505 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 CACNA2D3Q8IZS8 1091 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 CPXCR1Q8N123 301 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 TERB1Q8NA31 727 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 SRFBP1Q8NEF9 429 aaKnown RBP2.91□□□□□ -1.94
COPS3-213ENST00000577210 OR52L2PQ8NGH6 319 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 ADAMTS18Q8TE60 1221 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 GLMPQ8WWB7 406 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 PPM1EQ8WY54 764 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 RUBCNQ92622 972 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 SARAFQ96BY9 339 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 CTHRC1Q96CG8 243 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 EVI5LQ96CN4 794 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 HIC2Q96JB3 615 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 CCDC17Q96LX7 622 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 HS6ST2Q96MM7 605 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 BBC3Q96PG8 261 aaPredicted RBP2.91□□□□□ -1.94
COPS3-213ENST00000577210 PRR25Q96S07 402 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 TMEM120AQ9BXJ8 343 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 SEPSECSQ9HD40 501 aaKnown RBP2.91□□□□□ -1.94
COPS3-213ENST00000577210 OBP2BQ9NPH6 170 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 LIN7CQ9NUP9 197 aaKnown RBP2.91□□□□□ -1.94
COPS3-213ENST00000577210 BAG5Q9UL15 447 aa2.91□□□□□ -1.94
COPS3-213ENST00000577210 DMRT1Q9Y5R6 373 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms