RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 SENP8Q96LD8 212 aa24.59■■□□□ 1.53
NPLOC4-217ENST00000574897 TRABDQ9H4I3 376 aa24.59■■□□□ 1.53
NPLOC4-217ENST00000574897 CRTAC1Q9NQ79 661 aa24.59■■□□□ 1.53
NPLOC4-217ENST00000574897 DESP17661 470 aa24.58■■□□□ 1.53
NPLOC4-217ENST00000574897 ACADSBP45954 432 aa24.58■■□□□ 1.53
NPLOC4-217ENST00000574897 SULT1E1P49888 294 aa24.58■■□□□ 1.53
NPLOC4-217ENST00000574897 WDR4P57081 412 aaKnown RBP24.58■■□□□ 1.53
NPLOC4-217ENST00000574897 ZKSCAN8Q15776 578 aaPredicted RBP24.58■■□□□ 1.53
NPLOC4-217ENST00000574897 CLEC20AQ6ZU45 233 aa24.58■■□□□ 1.53
NPLOC4-217ENST00000574897 HFE2Q6ZVN8 426 aa24.58■■□□□ 1.53
NPLOC4-217ENST00000574897 CTU1Q7Z7A3 348 aaKnown RBP24.58■■□□□ 1.53
NPLOC4-217ENST00000574897 TDRD15B5MCY1 1934 aaKnown RBP24.58■■□□□ 1.52
NPLOC4-217ENST00000574897 GOT1P17174 413 aa24.58■■□□□ 1.52
NPLOC4-217ENST00000574897 NPR3P17342 541 aa24.58■■□□□ 1.52
NPLOC4-217ENST00000574897 AMPD1P23109 780 aa24.58■■□□□ 1.52
NPLOC4-217ENST00000574897 STX2P32856 288 aa24.58■■□□□ 1.52
NPLOC4-217ENST00000574897 MAP3K7CLP57077 242 aa24.58■■□□□ 1.52
NPLOC4-217ENST00000574897 DCAF6Q58WW2 860 aa24.58■■□□□ 1.52
NPLOC4-217ENST00000574897 PALM2Q8IXS6 379 aa24.58■■□□□ 1.52
NPLOC4-217ENST00000574897 CCDC197Q8NCU1 140 aa24.58■■□□□ 1.52
NPLOC4-217ENST00000574897 CSPG4P5Q96PW8 444 aa24.58■■□□□ 1.52
NPLOC4-217ENST00000574897 MED10Q9BTT4 135 aa24.58■■□□□ 1.52
NPLOC4-217ENST00000574897 TMEM30AQ9NV96 361 aa24.58■■□□□ 1.52
NPLOC4-217ENST00000574897 DDX43Q9NXZ2 648 aaKnown RBP24.58■■□□□ 1.52
NPLOC4-217ENST00000574897 ACTL7BQ9Y614 415 aa24.58■■□□□ 1.52
NPLOC4-217ENST00000574897 MATKP42679 507 aa24.57■■□□□ 1.52
NPLOC4-217ENST00000574897 SCNN1GP51170 649 aa24.57■■□□□ 1.52
NPLOC4-217ENST00000574897 NUGGCQ68CJ6 796 aa24.57■■□□□ 1.52
NPLOC4-217ENST00000574897 TSPAN18Q96SJ8 248 aa24.57■■□□□ 1.52
NPLOC4-217ENST00000574897 PAIP2Q9BPZ3 127 aaKnown RBP24.57■■□□□ 1.52
NPLOC4-217ENST00000574897 SENP6Q9GZR1 1112 aaPredicted RBP24.57■■□□□ 1.52
NPLOC4-217ENST00000574897 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP24.57■■□□□ 1.52
NPLOC4-217ENST00000574897 CASTOR2A6NHX0 329 aa24.57■■□□□ 1.52
NPLOC4-217ENST00000574897 GABRDO14764 452 aa24.57■■□□□ 1.52
NPLOC4-217ENST00000574897 RDXP35241 583 aaKnown RBP24.57■■□□□ 1.52
NPLOC4-217ENST00000574897 GEMIN4P57678 1058 aaKnown RBP24.57■■□□□ 1.52
NPLOC4-217ENST00000574897 CAP1Q01518 475 aa24.57■■□□□ 1.52
NPLOC4-217ENST00000574897 SYPL2Q5VXT5 272 aa24.57■■□□□ 1.52
NPLOC4-217ENST00000574897 PAFAH2Q99487 392 aa24.57■■□□□ 1.52
NPLOC4-217ENST00000574897 CYLDQ9NQC7 956 aa24.57■■□□□ 1.52
NPLOC4-217ENST00000574897 NKIRAS1Q9NYS0 192 aa24.57■■□□□ 1.52
NPLOC4-217ENST00000574897 BCLAF3A2AJT9 711 aaKnown RBP24.56■■□□□ 1.52
NPLOC4-217ENST00000574897 SCNN1AP37088 669 aa24.56■■□□□ 1.52
NPLOC4-217ENST00000574897 CACNA2D1P54289 1103 aa24.56■■□□□ 1.52
NPLOC4-217ENST00000574897 AGMOQ6ZNB7 445 aa24.56■■□□□ 1.52
NPLOC4-217ENST00000574897 CCDC121Q6ZUS5 278 aa24.56■■□□□ 1.52
NPLOC4-217ENST00000574897 RTP4Q96DX8 246 aa24.56■■□□□ 1.52
NPLOC4-217ENST00000574897 ACSS3Q9H6R3 686 aa24.56■■□□□ 1.52
NPLOC4-217ENST00000574897 KRT82Q9NSB4 513 aa24.56■■□□□ 1.52
NPLOC4-217ENST00000574897 PAK5Q9P286 719 aa24.56■■□□□ 1.52
NPLOC4-217ENST00000574897 PSMC3IPQ9P2W1 217 aaPredicted RBP24.56■■□□□ 1.52
NPLOC4-217ENST00000574897 FAM47DPA6NHR8 397 aa24.56■■□□□ 1.52
NPLOC4-217ENST00000574897 KBTBD13C9JR72 458 aa24.56■■□□□ 1.52
NPLOC4-217ENST00000574897 I3L4J1 428 aa24.56■■□□□ 1.52
NPLOC4-217ENST00000574897 FOXN2P32314 431 aa24.56■■□□□ 1.52
NPLOC4-217ENST00000574897 FLT3LGP49771 235 aa24.56■■□□□ 1.52
NPLOC4-217ENST00000574897 EFHC1Q5JVL4 640 aa24.56■■□□□ 1.52
NPLOC4-217ENST00000574897 ARCQ7LC44 396 aa24.56■■□□□ 1.52
NPLOC4-217ENST00000574897 RNF169Q8NCN4 708 aa24.56■■□□□ 1.52
NPLOC4-217ENST00000574897 TGS1Q96RS0 853 aaKnown RBP24.56■■□□□ 1.52
NPLOC4-217ENST00000574897 KCNK16Q96T55 309 aa24.56■■□□□ 1.52
NPLOC4-217ENST00000574897 PHACTR1Q9C0D0 580 aa24.56■■□□□ 1.52
NPLOC4-217ENST00000574897 SLC24A2Q9UI40 661 aa24.56■■□□□ 1.52
NPLOC4-217ENST00000574897 MYBPHLA2RUH7 354 aa24.55■■□□□ 1.52
NPLOC4-217ENST00000574897 ARL5CA6NH57 179 aa24.55■■□□□ 1.52
NPLOC4-217ENST00000574897 NRP1O14786 923 aa24.55■■□□□ 1.52
NPLOC4-217ENST00000574897 THP07101 528 aa24.55■■□□□ 1.52
NPLOC4-217ENST00000574897 PHBP35232 272 aa24.55■■□□□ 1.52
NPLOC4-217ENST00000574897 MRPS5P82675 430 aaKnown RBP24.55■■□□□ 1.52
NPLOC4-217ENST00000574897 PAN2Q504Q3 1202 aaKnown RBP24.55■■□□□ 1.52
NPLOC4-217ENST00000574897 NCBP2-AS2Q69YL0 99 aa24.55■■□□□ 1.52
NPLOC4-217ENST00000574897 GPRIN1Q7Z2K8 1008 aa24.55■■□□□ 1.52
NPLOC4-217ENST00000574897 SERINC5Q86VE9 423 aa24.55■■□□□ 1.52
NPLOC4-217ENST00000574897 ETNK1Q9HBU6 452 aa24.55■■□□□ 1.52
NPLOC4-217ENST00000574897 SAMD15Q9P1V8 674 aa24.55■■□□□ 1.52
NPLOC4-217ENST00000574897 USP3Q9Y6I4 520 aa24.55■■□□□ 1.52
NPLOC4-217ENST00000574897 TEX264Q9Y6I9 313 aa24.55■■□□□ 1.52
NPLOC4-217ENST00000574897 CAPN7Q9Y6W3 813 aa24.55■■□□□ 1.52
NPLOC4-217ENST00000574897 F5H423 210 aaPredicted RBP24.54■■□□□ 1.52
NPLOC4-217ENST00000574897 DNM1LO00429 736 aa24.54■■□□□ 1.52
NPLOC4-217ENST00000574897 METTL18O95568 372 aa24.54■■□□□ 1.52
NPLOC4-217ENST00000574897 RPA3P35244 121 aaPredicted RBP24.54■■□□□ 1.52
NPLOC4-217ENST00000574897 SLC25A52Q3SY17 297 aa24.54■■□□□ 1.52
NPLOC4-217ENST00000574897 KCNT2Q6UVM3 1135 aa24.54■■□□□ 1.52
NPLOC4-217ENST00000574897 ARHGEF18Q6ZSZ5 1173 aa24.54■■□□□ 1.52
NPLOC4-217ENST00000574897 STRADAQ7RTN6 431 aa24.54■■□□□ 1.52
NPLOC4-217ENST00000574897 RHOBTB2Q9BYZ6 727 aa24.54■■□□□ 1.52
NPLOC4-217ENST00000574897 LRRC4Q9HBW1 653 aa24.54■■□□□ 1.52
NPLOC4-217ENST00000574897 GRID1Q9ULK0 1009 aa24.54■■□□□ 1.52
NPLOC4-217ENST00000574897 CHADO15335 359 aa24.54■■□□□ 1.52
NPLOC4-217ENST00000574897 MGEA5O60502 916 aa24.54■■□□□ 1.52
NPLOC4-217ENST00000574897 APRTP07741 180 aa24.54■■□□□ 1.52
NPLOC4-217ENST00000574897 YWHAZP63104 245 aaKnown RBP24.54■■□□□ 1.52
NPLOC4-217ENST00000574897 VSIG1Q86XK7 387 aa24.54■■□□□ 1.52
NPLOC4-217ENST00000574897 PPM1EQ8WY54 764 aa24.54■■□□□ 1.52
NPLOC4-217ENST00000574897 CCT6BQ92526 530 aa24.54■■□□□ 1.52
NPLOC4-217ENST00000574897 DTLQ9NZJ0 730 aa24.54■■□□□ 1.52
NPLOC4-217ENST00000574897 FZD10Q9ULW2 581 aa24.54■■□□□ 1.52
NPLOC4-217ENST00000574897 GOLGA6L7A0A1B0GV03 622 aa24.53■■□□□ 1.52
NPLOC4-217ENST00000574897 CD52P31358 61 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms