RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 CCDC186Q7Z3E2 898 aa22.24■■□□□ 1.15
CHRNB1-206ENST00000574054 SCD5Q86SK9 330 aa22.24■■□□□ 1.15
CHRNB1-206ENST00000574054 TADA2BQ86TJ2 420 aa22.24■■□□□ 1.15
CHRNB1-206ENST00000574054 BHMTQ93088 406 aa22.24■■□□□ 1.15
CHRNB1-206ENST00000574054 TMEM176AQ96HP8 235 aa22.24■■□□□ 1.15
CHRNB1-206ENST00000574054 XPO6Q96QU8 1125 aaKnown RBP22.24■■□□□ 1.15
CHRNB1-206ENST00000574054 EDEM2Q9BV94 578 aa22.24■■□□□ 1.15
CHRNB1-206ENST00000574054 WDR35Q9P2L0 1181 aa22.24■■□□□ 1.15
CHRNB1-206ENST00000574054 MYO18AQ92614 2054 aaKnown RBP22.23■■□□□ 1.15
CHRNB1-206ENST00000574054 SMC2O95347 1197 aa22.23■■□□□ 1.15
CHRNB1-206ENST00000574054 RALAP11233 206 aa22.23■■□□□ 1.15
CHRNB1-206ENST00000574054 WASP42768 502 aa22.23■■□□□ 1.15
CHRNB1-206ENST00000574054 PLA2G4AP47712 749 aa22.23■■□□□ 1.15
CHRNB1-206ENST00000574054 PSEN1P49768 467 aa22.23■■□□□ 1.15
CHRNB1-206ENST00000574054 ZNF658Q5TYW1 1059 aaPredicted RBP22.23■■□□□ 1.15
CHRNB1-206ENST00000574054 KLHDC10Q6PID8 442 aa22.23■■□□□ 1.15
CHRNB1-206ENST00000574054 SLC4A11Q8NBS3 891 aa22.23■■□□□ 1.15
CHRNB1-206ENST00000574054 OLIG1Q8TAK6 271 aa22.23■■□□□ 1.15
CHRNB1-206ENST00000574054 ERCC4Q92889 916 aaPredicted RBP22.23■■□□□ 1.15
CHRNB1-206ENST00000574054 TATDN2Q93075 761 aa22.23■■□□□ 1.15
CHRNB1-206ENST00000574054 CNTNAP3BQ96NU0 1288 aa22.23■■□□□ 1.15
CHRNB1-206ENST00000574054 CNTNAP3Q9BZ76 1288 aa22.23■■□□□ 1.15
CHRNB1-206ENST00000574054 THADAQ6YHU6 1953 aa22.22■■□□□ 1.15
CHRNB1-206ENST00000574054 SLC16A3O15427 465 aaKnown RBP22.22■■□□□ 1.15
CHRNB1-206ENST00000574054 CACNG3O60359 315 aa22.22■■□□□ 1.15
CHRNB1-206ENST00000574054 HOXB2P14652 356 aa22.22■■□□□ 1.15
CHRNB1-206ENST00000574054 P2RY2P41231 377 aa22.22■■□□□ 1.15
CHRNB1-206ENST00000574054 RAD23BP54727 409 aa22.22■■□□□ 1.15
CHRNB1-206ENST00000574054 MCCD1P59942 119 aaPredicted RBP22.22■■□□□ 1.15
CHRNB1-206ENST00000574054 BECN1Q14457 450 aa22.22■■□□□ 1.15
CHRNB1-206ENST00000574054 CBWD6Q4V339 395 aa22.22■■□□□ 1.15
CHRNB1-206ENST00000574054 CBWD3Q5JTY5 395 aa22.22■■□□□ 1.15
CHRNB1-206ENST00000574054 CBWD5Q5RIA9 395 aa22.22■■□□□ 1.15
CHRNB1-206ENST00000574054 LPCAT2Q7L5N7 544 aa22.22■■□□□ 1.15
CHRNB1-206ENST00000574054 KCNV2Q8TDN2 545 aa22.22■■□□□ 1.15
CHRNB1-206ENST00000574054 SMARCE1Q969G3 411 aa22.22■■□□□ 1.15
CHRNB1-206ENST00000574054 FAXDC2Q96IV6 333 aa22.22■■□□□ 1.15
CHRNB1-206ENST00000574054 GSDMAQ96QA5 445 aa22.22■■□□□ 1.15
CHRNB1-206ENST00000574054 RASAL2Q9UJF2 1139 aa22.22■■□□□ 1.15
CHRNB1-206ENST00000574054 STC2O76061 302 aa22.21■■□□□ 1.15
CHRNB1-206ENST00000574054 HMBSP08397 361 aa22.21■■□□□ 1.15
CHRNB1-206ENST00000574054 NTSR1P30989 418 aa22.21■■□□□ 1.15
CHRNB1-206ENST00000574054 SLC8A3P57103 927 aa22.21■■□□□ 1.15
CHRNB1-206ENST00000574054 FKBP3Q00688 224 aaKnown RBP22.21■■□□□ 1.15
CHRNB1-206ENST00000574054 EFEMP1Q12805 493 aa22.21■■□□□ 1.15
CHRNB1-206ENST00000574054 EGFLAMQ63HQ2 1017 aa22.21■■□□□ 1.15
CHRNB1-206ENST00000574054 ANKRD40Q6AI12 368 aa22.21■■□□□ 1.15
CHRNB1-206ENST00000574054 ARMCX6Q7L4S7 300 aa22.21■■□□□ 1.15
CHRNB1-206ENST00000574054 FRMD1Q8N878 549 aa22.21■■□□□ 1.15
CHRNB1-206ENST00000574054 PIGKQ92643 395 aa22.21■■□□□ 1.15
CHRNB1-206ENST00000574054 ERLEC1Q96DZ1 483 aa22.21■■□□□ 1.15
CHRNB1-206ENST00000574054 CDK5RAP1Q96SZ6 601 aaKnown RBP22.21■■□□□ 1.15
CHRNB1-206ENST00000574054 PLK2Q9NYY3 685 aa22.21■■□□□ 1.15
CHRNB1-206ENST00000574054 MARK1Q9P0L2 795 aa22.21■■□□□ 1.15
CHRNB1-206ENST00000574054 USP3Q9Y6I4 520 aa22.21■■□□□ 1.15
CHRNB1-206ENST00000574054 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.2■■□□□ 1.14
CHRNB1-206ENST00000574054 KHNYNO15037 678 aaKnown RBP22.2■■□□□ 1.14
CHRNB1-206ENST00000574054 PMS1P54277 932 aaKnown RBP22.2■■□□□ 1.14
CHRNB1-206ENST00000574054 BYSLQ13895 437 aaKnown RBP22.2■■□□□ 1.14
CHRNB1-206ENST00000574054 GOLGA7BQ2TAP0 167 aa22.2■■□□□ 1.14
CHRNB1-206ENST00000574054 ARHGAP17Q68EM7 881 aa22.2■■□□□ 1.14
CHRNB1-206ENST00000574054 Q6ZNB5 142 aa22.2■■□□□ 1.14
CHRNB1-206ENST00000574054 TOGARAM2Q6ZUX3 1019 aa22.2■■□□□ 1.14
CHRNB1-206ENST00000574054 RSRC2Q7L4I2 434 aaKnown RBP22.2■■□□□ 1.14
CHRNB1-206ENST00000574054 TMEFF1Q8IYR6 380 aa22.2■■□□□ 1.14
CHRNB1-206ENST00000574054 CLIC5Q9NZA1 410 aa22.2■■□□□ 1.14
CHRNB1-206ENST00000574054 MBD1Q9UIS9 605 aaPredicted RBP22.2■■□□□ 1.14
CHRNB1-206ENST00000574054 HOOK1Q9UJC3 728 aaKnown RBP22.2■■□□□ 1.14
CHRNB1-206ENST00000574054 HCN2Q9UL51 889 aa22.2■■□□□ 1.14
CHRNB1-206ENST00000574054 LNP1A1A4G5 178 aa22.19■■□□□ 1.14
CHRNB1-206ENST00000574054 TRIM49BA6NDI0 452 aa22.19■■□□□ 1.14
CHRNB1-206ENST00000574054 TM4SF5O14894 197 aa22.19■■□□□ 1.14
CHRNB1-206ENST00000574054 ZBTB24O43167 697 aaPredicted RBP22.19■■□□□ 1.14
CHRNB1-206ENST00000574054 DGKGP49619 791 aa22.19■■□□□ 1.14
CHRNB1-206ENST00000574054 MAP7D1Q3KQU3 841 aa22.19■■□□□ 1.14
CHRNB1-206ENST00000574054 COBLL1Q53SF7 1204 aa22.19■■□□□ 1.14
CHRNB1-206ENST00000574054 SDE2Q6IQ49 451 aa22.19■■□□□ 1.14
CHRNB1-206ENST00000574054 PIGZQ86VD9 579 aa22.19■■□□□ 1.14
CHRNB1-206ENST00000574054 CHPFQ8IZ52 775 aa22.19■■□□□ 1.14
CHRNB1-206ENST00000574054 ARHGAP18Q8N392 663 aa22.19■■□□□ 1.14
CHRNB1-206ENST00000574054 ENGASEQ8NFI3 743 aa22.19■■□□□ 1.14
CHRNB1-206ENST00000574054 ACOX2Q99424 681 aa22.19■■□□□ 1.14
CHRNB1-206ENST00000574054 ARMCX3Q9UH62 379 aaPredicted RBP22.19■■□□□ 1.14
CHRNB1-206ENST00000574054 GON4LQ3T8J9 2241 aa22.19■■□□□ 1.14
CHRNB1-206ENST00000574054 NUP205Q92621 2012 aa22.18■■□□□ 1.14
CHRNB1-206ENST00000574054 C4orf47A7E2U8 309 aa22.18■■□□□ 1.14
CHRNB1-206ENST00000574054 PATE3B3GLJ2 98 aa22.18■■□□□ 1.14
CHRNB1-206ENST00000574054 PRRT4C9JH25 899 aa22.18■■□□□ 1.14
CHRNB1-206ENST00000574054 KLKB1P03952 638 aa22.18■■□□□ 1.14
CHRNB1-206ENST00000574054 CD19P15391 556 aa22.18■■□□□ 1.14
CHRNB1-206ENST00000574054 CORO1AP31146 461 aaKnown RBP22.18■■□□□ 1.14
CHRNB1-206ENST00000574054 NUCB2P80303 420 aa22.18■■□□□ 1.14
CHRNB1-206ENST00000574054 COG7P83436 770 aa22.18■■□□□ 1.14
CHRNB1-206ENST00000574054 CUL2Q13617 745 aa22.18■■□□□ 1.14
CHRNB1-206ENST00000574054 ZC3H3Q8IXZ2 948 aaKnown RBP22.18■■□□□ 1.14
CHRNB1-206ENST00000574054 ZNF276Q8N554 614 aa22.18■■□□□ 1.14
CHRNB1-206ENST00000574054 ANKRD52Q8NB46 1076 aa22.18■■□□□ 1.14
CHRNB1-206ENST00000574054 LSM14BQ9BX40 385 aaKnown RBP22.18■■□□□ 1.14
CHRNB1-206ENST00000574054 GTPBP4Q9BZE4 634 aaKnown RBP22.18■■□□□ 1.14
CHRNB1-206ENST00000574054 UBXN6Q9BZV1 441 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms